RNA–Protein interactions for RNA: ENST00000354674.4

SYNE1-203, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 3,154 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-203ENST00000354674 STX7O15400 261 aaKnown RBP9.82□□□□□ -0.84
SYNE1-203ENST00000354674 CD3EAPO15446 510 aaKnown RBP9.82□□□□□ -0.84
SYNE1-203ENST00000354674 OR7A10O76100 309 aa9.82□□□□□ -0.84
SYNE1-203ENST00000354674 CLDN7O95471 211 aa9.82□□□□□ -0.84
SYNE1-203ENST00000354674 PSKH1P11801 424 aa9.82□□□□□ -0.84
SYNE1-203ENST00000354674 LHCGRP22888 699 aa9.82□□□□□ -0.84
SYNE1-203ENST00000354674 ITGB7P26010 798 aa9.82□□□□□ -0.84
SYNE1-203ENST00000354674 OR2B6P58173 313 aa9.82□□□□□ -0.84
SYNE1-203ENST00000354674 MPP1Q00013 466 aa9.82□□□□□ -0.84
SYNE1-203ENST00000354674 PTSQ03393 145 aa9.82□□□□□ -0.84
SYNE1-203ENST00000354674 SERPINA13PQ6UXR4 307 aa9.82□□□□□ -0.84
SYNE1-203ENST00000354674 PLEKHM3Q6ZWE6 761 aa9.82□□□□□ -0.84
SYNE1-203ENST00000354674 R3HCC1LQ7Z5L2 792 aaKnown RBP9.82□□□□□ -0.84
SYNE1-203ENST00000354674 DHRSXQ8N5I4 330 aa9.82□□□□□ -0.84
SYNE1-203ENST00000354674 DEFB123Q8N688 67 aa9.82□□□□□ -0.84
SYNE1-203ENST00000354674 OR8D1Q8WZ84 308 aa9.82□□□□□ -0.84
SYNE1-203ENST00000354674 SIPA1Q96FS4 1042 aa9.82□□□□□ -0.84
SYNE1-203ENST00000354674 TXNDC15Q96J42 360 aa9.82□□□□□ -0.84
SYNE1-203ENST00000354674 VPS39Q96JC1 886 aa9.82□□□□□ -0.84
SYNE1-203ENST00000354674 KCTD14Q9BQ13 255 aaPredicted RBP9.82□□□□□ -0.84
SYNE1-203ENST00000354674 AIFM2Q9BRQ8 373 aa9.82□□□□□ -0.84
SYNE1-203ENST00000354674 FAM126AQ9BYI3 521 aaPredicted RBP9.82□□□□□ -0.84
SYNE1-203ENST00000354674 GPR63Q9BZJ6 419 aa9.82□□□□□ -0.84
SYNE1-203ENST00000354674 OR2B2Q9GZK3 357 aa9.82□□□□□ -0.84
SYNE1-203ENST00000354674 WDR12Q9GZL7 423 aaKnown RBP9.82□□□□□ -0.84
SYNE1-203ENST00000354674 RANGRFQ9HD47 186 aaPredicted RBP9.82□□□□□ -0.84
SYNE1-203ENST00000354674 WASH6PQ9NQA3 447 aa9.82□□□□□ -0.84
SYNE1-203ENST00000354674 EMCNQ9ULC0 261 aa9.82□□□□□ -0.84
SYNE1-203ENST00000354674 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.82□□□□□ -0.84
SYNE1-203ENST00000354674 MRPS7Q9Y2R9 242 aaKnown RBP9.82□□□□□ -0.84
SYNE1-203ENST00000354674 UPK3BL1B0FP48 263 aa9.82□□□□□ -0.84
SYNE1-203ENST00000354674 UPK3BL2E5RIL1 263 aa9.82□□□□□ -0.84
SYNE1-203ENST00000354674 I3L521 148 aa9.82□□□□□ -0.84
SYNE1-203ENST00000354674 IL12AP29459 219 aa9.82□□□□□ -0.84
SYNE1-203ENST00000354674 KRT20P35900 424 aa9.82□□□□□ -0.84
SYNE1-203ENST00000354674 SLC12A2P55011 1212 aa9.82□□□□□ -0.84
SYNE1-203ENST00000354674 BNIP2Q12982 314 aa9.82□□□□□ -0.84
SYNE1-203ENST00000354674 CAMK2GQ13555 558 aaPredicted RBP9.82□□□□□ -0.84
SYNE1-203ENST00000354674 PCLAFQ15004 111 aa9.82□□□□□ -0.84
SYNE1-203ENST00000354674 TBRG1Q3YBR2 411 aa9.82□□□□□ -0.84
SYNE1-203ENST00000354674 CLVS2Q5SYC1 327 aa9.82□□□□□ -0.84
SYNE1-203ENST00000354674 TSPAN33Q86UF1 283 aa9.82□□□□□ -0.84
SYNE1-203ENST00000354674 TRIM48Q8IWZ4 208 aa9.82□□□□□ -0.84
SYNE1-203ENST00000354674 OR9I1Q8NGQ6 314 aa9.82□□□□□ -0.84
SYNE1-203ENST00000354674 OR6P1Q8NGX9 317 aa9.82□□□□□ -0.84
SYNE1-203ENST00000354674 RAB2BQ8WUD1 216 aa9.82□□□□□ -0.84
SYNE1-203ENST00000354674 METTL2AQ96IZ6 378 aaKnown RBP9.82□□□□□ -0.84
SYNE1-203ENST00000354674 TSNARE1Q96NA8 513 aa9.82□□□□□ -0.84
SYNE1-203ENST00000354674 DOK1Q99704 481 aa9.82□□□□□ -0.84
SYNE1-203ENST00000354674 GABRG3Q99928 467 aa9.82□□□□□ -0.84
SYNE1-203ENST00000354674 CAB39LQ9H9S4 337 aa9.82□□□□□ -0.84
SYNE1-203ENST00000354674 ATP13A2Q9NQ11 1180 aa9.82□□□□□ -0.84
SYNE1-203ENST00000354674 CATSPERZQ9NTU4 200 aa9.82□□□□□ -0.84
SYNE1-203ENST00000354674 FKBPLQ9UIM3 349 aa9.82□□□□□ -0.84
SYNE1-203ENST00000354674 SNX6Q9UNH7 406 aa9.82□□□□□ -0.84
SYNE1-203ENST00000354674 PKP3Q9Y446 797 aa9.82□□□□□ -0.84
SYNE1-203ENST00000354674 STON1Q9Y6Q2 735 aa9.82□□□□□ -0.84
SYNE1-203ENST00000354674 CKAP5Q14008 2032 aa9.82□□□□□ -0.84
SYNE1-203ENST00000354674 C16orf96A6NNT2 1141 aa9.81□□□□□ -0.84
SYNE1-203ENST00000354674 MTHFD1P11586 935 aaKnown RBP9.81□□□□□ -0.84
SYNE1-203ENST00000354674 NCK1P16333 377 aa9.81□□□□□ -0.84
SYNE1-203ENST00000354674 ZNF30P17039 623 aa9.81□□□□□ -0.84
SYNE1-203ENST00000354674 AGXTP21549 392 aa9.81□□□□□ -0.84
SYNE1-203ENST00000354674 OXTRP30559 389 aa9.81□□□□□ -0.84
SYNE1-203ENST00000354674 SUOXP51687 545 aa9.81□□□□□ -0.84
SYNE1-203ENST00000354674 STC1P52823 247 aa9.81□□□□□ -0.84
SYNE1-203ENST00000354674 YBX1P67809 324 aaKnown RBP9.81□□□□□ -0.84
SYNE1-203ENST00000354674 SKIV2LQ15477 1246 aaKnown RBP9.81□□□□□ -0.84
SYNE1-203ENST00000354674 LRRC66Q68CR7 880 aa9.81□□□□□ -0.84
SYNE1-203ENST00000354674 ANKRD34AQ69YU3 496 aa9.81□□□□□ -0.84
SYNE1-203ENST00000354674 MRNIPQ6NTE8 343 aa9.81□□□□□ -0.84
SYNE1-203ENST00000354674 RPS27LQ71UM5 84 aaKnown RBP9.81□□□□□ -0.84
SYNE1-203ENST00000354674 DPPA4Q7L190 304 aa9.81□□□□□ -0.84
SYNE1-203ENST00000354674 LYSMD2Q8IV50 215 aa9.81□□□□□ -0.84
SYNE1-203ENST00000354674 SPATA6LQ8N4H0 392 aa9.81□□□□□ -0.84
SYNE1-203ENST00000354674 NRBF2Q96F24 287 aa9.81□□□□□ -0.84
SYNE1-203ENST00000354674 NEDD4LQ96PU5 975 aa9.81□□□□□ -0.84
SYNE1-203ENST00000354674 EFCAB1Q9HAE3 211 aa9.81□□□□□ -0.84
SYNE1-203ENST00000354674 INTS10Q9NVR2 710 aaKnown RBP9.81□□□□□ -0.84
SYNE1-203ENST00000354674 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.81□□□□□ -0.84
SYNE1-203ENST00000354674 B4GALT6Q9UBX8 382 aa9.81□□□□□ -0.84
SYNE1-203ENST00000354674 AP3M1Q9Y2T2 418 aa9.81□□□□□ -0.84
SYNE1-203ENST00000354674 PIAS3Q9Y6X2 628 aa9.81□□□□□ -0.84
SYNE1-203ENST00000354674 BRWD1Q9NSI6 2320 aa9.81□□□□□ -0.84
SYNE1-203ENST00000354674 AGAP14A8MT82 685 aa9.81□□□□□ -0.84
SYNE1-203ENST00000354674 ZNF195O14628 629 aa9.81□□□□□ -0.84
SYNE1-203ENST00000354674 SPINT1O43278 529 aa9.81□□□□□ -0.84
SYNE1-203ENST00000354674 CYP2A6P11509 494 aaPredicted RBP9.81□□□□□ -0.84
SYNE1-203ENST00000354674 BPIP17213 487 aa9.81□□□□□ -0.84
SYNE1-203ENST00000354674 DRD1P21728 446 aa9.81□□□□□ -0.84
SYNE1-203ENST00000354674 VIPR1P32241 457 aa9.81□□□□□ -0.84
SYNE1-203ENST00000354674 SHMT2P34897 504 aa9.81□□□□□ -0.84
SYNE1-203ENST00000354674 MAP2K4P45985 399 aa9.81□□□□□ -0.84
SYNE1-203ENST00000354674 AKR1D1P51857 326 aa9.81□□□□□ -0.84
SYNE1-203ENST00000354674 MEP1AQ16819 746 aa9.81□□□□□ -0.84
SYNE1-203ENST00000354674 ADPRMQ3LIE5 342 aa9.81□□□□□ -0.84
SYNE1-203ENST00000354674 ZNF789Q5FWF6 425 aa9.81□□□□□ -0.84
SYNE1-203ENST00000354674 PARS2Q7L3T8 475 aaKnown RBP9.81□□□□□ -0.84
SYNE1-203ENST00000354674 MFSD4AQ8N468 514 aa9.81□□□□□ -0.84
SYNE1-203ENST00000354674 ACVR1CQ8NER5 493 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms