RNA–Protein interactions for RNA: ENST00000353411.10

SKP1-202, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SKP1, Length 9,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-202ENST00000353411 ST3GAL4Q11206 333 aa4.92□□□□□ -1.62
SKP1-202ENST00000353411 LAPTM5Q13571 262 aa4.92□□□□□ -1.62
SKP1-202ENST00000353411 ZMYND11Q15326 602 aa4.92□□□□□ -1.62
SKP1-202ENST00000353411 PPP1R3AQ16821 1122 aa4.92□□□□□ -1.62
SKP1-202ENST00000353411 UBXN11Q5T124 520 aa4.92□□□□□ -1.62
SKP1-202ENST00000353411 C1orf94Q6P1W5 598 aa4.92□□□□□ -1.62
SKP1-202ENST00000353411 FAM180AQ6UWF9 173 aa4.92□□□□□ -1.62
SKP1-202ENST00000353411 SLC30A8Q8IWU4 369 aa4.92□□□□□ -1.62
SKP1-202ENST00000353411 FSTL5Q8N475 847 aaPredicted RBP4.92□□□□□ -1.62
SKP1-202ENST00000353411 TMEM161BQ8NDZ6 487 aa4.92□□□□□ -1.62
SKP1-202ENST00000353411 CNIH3Q8TBE1 160 aa4.92□□□□□ -1.62
SKP1-202ENST00000353411 C7orf50Q9BRJ6 194 aaKnown RBP4.92□□□□□ -1.62
SKP1-202ENST00000353411 TBC1D17Q9HA65 648 aa4.92□□□□□ -1.62
SKP1-202ENST00000353411 IGSF5Q9NSI5 407 aa4.92□□□□□ -1.62
SKP1-202ENST00000353411 CD163L1Q9NR16 1453 aa4.92□□□□□ -1.62
SKP1-202ENST00000353411 TEX13CA0A0J9YWL9 993 aa4.92□□□□□ -1.62
SKP1-202ENST00000353411 CAPN5O15484 640 aaPredicted RBP4.92□□□□□ -1.62
SKP1-202ENST00000353411 CPNE6O95741 557 aa4.92□□□□□ -1.62
SKP1-202ENST00000353411 CHRNB2P17787 502 aa4.92□□□□□ -1.62
SKP1-202ENST00000353411 PRDX5P30044 214 aa4.92□□□□□ -1.62
SKP1-202ENST00000353411 GRK4P32298 578 aa4.92□□□□□ -1.62
SKP1-202ENST00000353411 TKTL1P51854 596 aa4.92□□□□□ -1.62
SKP1-202ENST00000353411 EN1Q05925 392 aaPredicted RBP4.92□□□□□ -1.62
SKP1-202ENST00000353411 PEA15Q15121 130 aa4.92□□□□□ -1.62
SKP1-202ENST00000353411 GRIK5Q16478 980 aa4.92□□□□□ -1.62
SKP1-202ENST00000353411 MYO7BQ6PIF6 2116 aa4.92□□□□□ -1.62
SKP1-202ENST00000353411 BRAT1Q6PJG6 821 aa4.92□□□□□ -1.62
SKP1-202ENST00000353411 ZNF607Q96SK3 696 aa4.92□□□□□ -1.62
SKP1-202ENST00000353411 AIF1LQ9BQI0 150 aa4.92□□□□□ -1.62
SKP1-202ENST00000353411 PIH1D1Q9NWS0 290 aaKnown RBP4.92□□□□□ -1.62
SKP1-202ENST00000353411 ARHGEF28Q8N1W1 1705 aaKnown RBP4.92□□□□□ -1.62
SKP1-202ENST00000353411 KIF26BQ2KJY2 2108 aa4.92□□□□□ -1.62
SKP1-202ENST00000353411 FAM86B1E9PN63 330 aa4.92□□□□□ -1.62
SKP1-202ENST00000353411 PMM2O15305 246 aa4.92□□□□□ -1.62
SKP1-202ENST00000353411 SDC3O75056 442 aa4.92□□□□□ -1.62
SKP1-202ENST00000353411 RAD17O75943 681 aa4.92□□□□□ -1.62
SKP1-202ENST00000353411 TFP02787 698 aa4.92□□□□□ -1.62
SKP1-202ENST00000353411 SRPRAP08240 638 aaKnown RBP4.92□□□□□ -1.62
SKP1-202ENST00000353411 UBBP0CG47 229 aa4.92□□□□□ -1.62
SKP1-202ENST00000353411 UBCP0CG48 685 aaKnown RBP4.92□□□□□ -1.62
SKP1-202ENST00000353411 TYRP14679 529 aa4.92□□□□□ -1.62
SKP1-202ENST00000353411 CXCR2P25025 360 aa4.92□□□□□ -1.62
SKP1-202ENST00000353411 MAGEA6P43360 314 aa4.92□□□□□ -1.62
SKP1-202ENST00000353411 RGS19P49795 217 aa4.92□□□□□ -1.62
SKP1-202ENST00000353411 NR0B1P51843 470 aaKnown RBP4.92□□□□□ -1.62
SKP1-202ENST00000353411 DNAJB13P59910 316 aa4.92□□□□□ -1.62
SKP1-202ENST00000353411 RPS27AP62979 156 aaKnown RBP4.92□□□□□ -1.62
SKP1-202ENST00000353411 UBA52P62987 128 aaKnown RBP4.92□□□□□ -1.62
SKP1-202ENST00000353411 KCNJ11Q14654 390 aa4.92□□□□□ -1.62
SKP1-202ENST00000353411 TRAM1Q15629 374 aa4.92□□□□□ -1.62
SKP1-202ENST00000353411 USP41Q3LFD5 358 aa4.92□□□□□ -1.62
SKP1-202ENST00000353411 ATF7IP2Q5U623 682 aa4.92□□□□□ -1.62
SKP1-202ENST00000353411 TCTE3Q8IZS6 198 aa4.92□□□□□ -1.62
SKP1-202ENST00000353411 RAB42Q8N4Z0 105 aa4.92□□□□□ -1.62
SKP1-202ENST00000353411 KCT2Q8NC54 265 aa4.92□□□□□ -1.62
SKP1-202ENST00000353411 C18orf25Q96B23 403 aaPredicted RBP4.92□□□□□ -1.62
SKP1-202ENST00000353411 MGLLQ99685 303 aa4.92□□□□□ -1.62
SKP1-202ENST00000353411 MXRA8Q9BRK3 442 aa4.92□□□□□ -1.62
SKP1-202ENST00000353411 NKX6-2Q9C056 277 aaPredicted RBP4.92□□□□□ -1.62
SKP1-202ENST00000353411 EXO5Q9H790 373 aa4.92□□□□□ -1.62
SKP1-202ENST00000353411 GULP1Q9UBP9 304 aa4.92□□□□□ -1.62
SKP1-202ENST00000353411 ZDHHC2Q9UIJ5 367 aa4.92□□□□□ -1.62
SKP1-202ENST00000353411 SH3BGRL2Q9UJC5 107 aa4.92□□□□□ -1.62
SKP1-202ENST00000353411 VWA7Q9Y334 891 aa4.92□□□□□ -1.62
SKP1-202ENST00000353411 PRSS47A8MTI9 375 aa4.91□□□□□ -1.62
SKP1-202ENST00000353411 ZNF254O75437 659 aa4.91□□□□□ -1.62
SKP1-202ENST00000353411 MAFO75444 373 aaPredicted RBP4.91□□□□□ -1.62
SKP1-202ENST00000353411 SAGP10523 405 aaPredicted RBP4.91□□□□□ -1.62
SKP1-202ENST00000353411 HTR3AP46098 478 aa4.91□□□□□ -1.62
SKP1-202ENST00000353411 RENBPP51606 427 aa4.91□□□□□ -1.62
SKP1-202ENST00000353411 ZBTB37Q5TC79 503 aa4.91□□□□□ -1.62
SKP1-202ENST00000353411 LRRC69Q6ZNQ3 347 aa4.91□□□□□ -1.62
SKP1-202ENST00000353411 C1orf186Q6ZWK4 172 aa4.91□□□□□ -1.62
SKP1-202ENST00000353411 KLHL36Q8N4N3 616 aa4.91□□□□□ -1.62
SKP1-202ENST00000353411 GPR156Q8NFN8 814 aa4.91□□□□□ -1.62
SKP1-202ENST00000353411 ST8SIA2Q92186 375 aa4.91□□□□□ -1.62
SKP1-202ENST00000353411 ZNF512Q96ME7 567 aaPredicted RBP4.91□□□□□ -1.62
SKP1-202ENST00000353411 HEBP1Q9NRV9 189 aa4.91□□□□□ -1.62
SKP1-202ENST00000353411 SEMA3GQ9NS98 782 aa4.91□□□□□ -1.62
SKP1-202ENST00000353411 GPATCH2LQ9NWQ4 482 aa4.91□□□□□ -1.62
SKP1-202ENST00000353411 DCAF16Q9NXF7 216 aa4.91□□□□□ -1.62
SKP1-202ENST00000353411 TMPRSS11EQ9UL52 423 aa4.91□□□□□ -1.62
SKP1-202ENST00000353411 AKAP11Q9UKA4 1901 aa4.91□□□□□ -1.62
SKP1-202ENST00000353411 UBR1Q8IWV7 1749 aa4.91□□□□□ -1.62
SKP1-202ENST00000353411 TPH1P17752 444 aa4.91□□□□□ -1.62
SKP1-202ENST00000353411 IDUAP35475 653 aa4.91□□□□□ -1.62
SKP1-202ENST00000353411 RAB13P51153 203 aa4.91□□□□□ -1.62
SKP1-202ENST00000353411 RACK1P63244 317 aaKnown RBP4.91□□□□□ -1.62
SKP1-202ENST00000353411 ADAM8P78325 824 aa4.91□□□□□ -1.62
SKP1-202ENST00000353411 SLC6A3Q01959 620 aa4.91□□□□□ -1.62
SKP1-202ENST00000353411 HEPACAMQ14CZ8 416 aa4.91□□□□□ -1.62
SKP1-202ENST00000353411 NHSL2Q5HYW2 709 aa4.91□□□□□ -1.62
SKP1-202ENST00000353411 INTS6LQ5JSJ4 861 aaKnown RBP4.91□□□□□ -1.62
SKP1-202ENST00000353411 VARS2Q5ST30 1063 aaKnown RBP4.91□□□□□ -1.62
SKP1-202ENST00000353411 ZNF529Q6P280 563 aa4.91□□□□□ -1.62
SKP1-202ENST00000353411 INTS5Q6P9B9 1019 aaKnown RBP4.91□□□□□ -1.62
SKP1-202ENST00000353411 RNF130Q86XS8 419 aa4.91□□□□□ -1.62
SKP1-202ENST00000353411 ZNF567Q8N184 647 aa4.91□□□□□ -1.62
SKP1-202ENST00000353411 THEM5Q8N1Q8 247 aa4.91□□□□□ -1.62
SKP1-202ENST00000353411 OR8J3Q8NGG0 315 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms