RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 XKR7Q5GH72 579 aa7.98□□□□□ -1.13
CD44-205ENST00000352818 COQ5Q5HYK3 327 aa7.98□□□□□ -1.13
CD44-205ENST00000352818 PERM1Q5SV97 790 aa7.98□□□□□ -1.13
CD44-205ENST00000352818 CLEC6AQ6EIG7 209 aa7.98□□□□□ -1.13
CD44-205ENST00000352818 DPPA4Q7L190 304 aa7.98□□□□□ -1.13
CD44-205ENST00000352818 SPATA19Q7Z5L4 167 aa7.98□□□□□ -1.13
CD44-205ENST00000352818 SPNS2Q8IVW8 549 aa7.98□□□□□ -1.13
CD44-205ENST00000352818 DEFB107AQ8IZN7 70 aa7.98□□□□□ -1.13
CD44-205ENST00000352818 PAF1Q8N7H5 531 aa7.98□□□□□ -1.13
CD44-205ENST00000352818 MFSD2AQ8NA29 543 aa7.98□□□□□ -1.13
CD44-205ENST00000352818 HMGCLL1Q8TB92 370 aa7.98□□□□□ -1.13
CD44-205ENST00000352818 LKAAEAR1Q8TD35 194 aa7.98□□□□□ -1.13
CD44-205ENST00000352818 TSPEARQ8WU66 669 aa7.98□□□□□ -1.13
CD44-205ENST00000352818 FAM136AQ96C01 138 aa7.98□□□□□ -1.13
CD44-205ENST00000352818 KLHL32Q96NJ5 620 aa7.98□□□□□ -1.13
CD44-205ENST00000352818 NSUN5Q96P11 429 aaKnown RBP7.98□□□□□ -1.13
CD44-205ENST00000352818 COPS8Q99627 209 aa7.98□□□□□ -1.13
CD44-205ENST00000352818 SLC25A23Q9BV35 468 aa7.98□□□□□ -1.13
CD44-205ENST00000352818 BOCQ9BWV1 1114 aa7.98□□□□□ -1.13
CD44-205ENST00000352818 EFCAB1Q9HAE3 211 aa7.98□□□□□ -1.13
CD44-205ENST00000352818 MRPL40Q9NQ50 206 aaKnown RBP7.98□□□□□ -1.13
CD44-205ENST00000352818 PRSS16Q9NQE7 514 aa7.98□□□□□ -1.13
CD44-205ENST00000352818 CD274Q9NZQ7 290 aa7.98□□□□□ -1.13
CD44-205ENST00000352818 B4GALT6Q9UBX8 382 aa7.98□□□□□ -1.13
CD44-205ENST00000352818 IL36AQ9UHA7 158 aa7.98□□□□□ -1.13
CD44-205ENST00000352818 SLCO3A1Q9UIG8 710 aa7.98□□□□□ -1.13
CD44-205ENST00000352818 PTBP2Q9UKA9 531 aaKnown RBP7.98□□□□□ -1.13
CD44-205ENST00000352818 VPS4AQ9UN37 437 aa7.98□□□□□ -1.13
CD44-205ENST00000352818 L3MBTL1Q9Y468 752 aa7.98□□□□□ -1.13
CD44-205ENST00000352818 PRSS21Q9Y6M0 314 aa7.98□□□□□ -1.13
CD44-205ENST00000352818 SHANK1Q9Y566 2161 aa7.97□□□□□ -1.13
CD44-205ENST00000352818 PRAMEF33A0A0G2JMD5 474 aa7.97□□□□□ -1.13
CD44-205ENST00000352818 LOC100653049A0A140TA62 436 aa7.97□□□□□ -1.13
CD44-205ENST00000352818 ARHGAP10A1A4S6 786 aa7.97□□□□□ -1.13
CD44-205ENST00000352818 LRRC14BA6NHZ5 514 aa7.97□□□□□ -1.13
CD44-205ENST00000352818 IQCF5A8MTL0 148 aa7.97□□□□□ -1.13
CD44-205ENST00000352818 PSMD11O00231 422 aa7.97□□□□□ -1.13
CD44-205ENST00000352818 PIP5K1BO14986 540 aa7.97□□□□□ -1.13
CD44-205ENST00000352818 KPNA5O15131 536 aa7.97□□□□□ -1.13
CD44-205ENST00000352818 SLC16A5O15375 505 aa7.97□□□□□ -1.13
CD44-205ENST00000352818 NVLO15381 856 aaKnown RBP7.97□□□□□ -1.13
CD44-205ENST00000352818 NUAK1O60285 661 aa7.97□□□□□ -1.13
CD44-205ENST00000352818 PRAMEF10O60809 474 aa7.97□□□□□ -1.13
CD44-205ENST00000352818 GPC4O75487 556 aa7.97□□□□□ -1.13
CD44-205ENST00000352818 KRT34O76011 436 aa7.97□□□□□ -1.13
CD44-205ENST00000352818 KRT36O76013 467 aa7.97□□□□□ -1.13
CD44-205ENST00000352818 SLC25A14O95258 325 aaPredicted RBP7.97□□□□□ -1.13
CD44-205ENST00000352818 OR56A5P0C7T3 313 aa7.97□□□□□ -1.13
CD44-205ENST00000352818 MPC1LP0DKB6 136 aa7.97□□□□□ -1.13
CD44-205ENST00000352818 LBPP18428 481 aa7.97□□□□□ -1.13
CD44-205ENST00000352818 UGT1A6P19224 532 aa7.97□□□□□ -1.13
CD44-205ENST00000352818 UGT1A1P22309 533 aa7.97□□□□□ -1.13
CD44-205ENST00000352818 UGT1A4P22310 534 aa7.97□□□□□ -1.13
CD44-205ENST00000352818 GPX3P22352 226 aa7.97□□□□□ -1.13
CD44-205ENST00000352818 UGT1A3P35503 534 aa7.97□□□□□ -1.13
CD44-205ENST00000352818 PIK3CGP48736 1102 aa7.97□□□□□ -1.13
CD44-205ENST00000352818 CCR5P51681 352 aa7.97□□□□□ -1.13
CD44-205ENST00000352818 CDH13P55290 713 aa7.97□□□□□ -1.13
CD44-205ENST00000352818 STX1BP61266 288 aa7.97□□□□□ -1.13
CD44-205ENST00000352818 PPP2CBP62714 309 aa7.97□□□□□ -1.13
CD44-205ENST00000352818 AP2B1P63010 937 aa7.97□□□□□ -1.13
CD44-205ENST00000352818 PPP2CAP67775 309 aa7.97□□□□□ -1.13
CD44-205ENST00000352818 SLC34A1Q06495 639 aa7.97□□□□□ -1.13
CD44-205ENST00000352818 SP140Q13342 867 aa7.97□□□□□ -1.13
CD44-205ENST00000352818 ARHGEF7Q14155 803 aa7.97□□□□□ -1.13
CD44-205ENST00000352818 RCN1Q15293 331 aa7.97□□□□□ -1.13
CD44-205ENST00000352818 E2F5Q15329 346 aa7.97□□□□□ -1.13
CD44-205ENST00000352818 SMU1Q2TAY7 513 aa7.97□□□□□ -1.13
CD44-205ENST00000352818 ATP13A5Q4VNC0 1218 aa7.97□□□□□ -1.13
CD44-205ENST00000352818 ZNF805Q5CZA5 627 aa7.97□□□□□ -1.13
CD44-205ENST00000352818 PIGGQ5H8A4 983 aa7.97□□□□□ -1.13
CD44-205ENST00000352818 PLEKHS1Q5SXH7 462 aa7.97□□□□□ -1.13
CD44-205ENST00000352818 SULT1C3Q6IMI6 304 aa7.97□□□□□ -1.13
CD44-205ENST00000352818 SERPINA13PQ6UXR4 307 aa7.97□□□□□ -1.13
CD44-205ENST00000352818 SPNS3Q6ZMD2 512 aa7.97□□□□□ -1.13
CD44-205ENST00000352818 BNC2Q6ZN30 1099 aaPredicted RBP7.97□□□□□ -1.13
CD44-205ENST00000352818 GPRIN3Q6ZVF9 776 aa7.97□□□□□ -1.13
CD44-205ENST00000352818 NEK10Q6ZWH5 1172 aa7.97□□□□□ -1.13
CD44-205ENST00000352818 FRA10AC1Q70Z53 315 aa7.97□□□□□ -1.13
CD44-205ENST00000352818 TIPARPQ7Z3E1 657 aaKnown RBP7.97□□□□□ -1.13
CD44-205ENST00000352818 SYVN1Q86TM6 617 aa7.97□□□□□ -1.13
CD44-205ENST00000352818 MCEMP1Q8IX19 187 aa7.97□□□□□ -1.13
CD44-205ENST00000352818 NRSN1Q8IZ57 195 aa7.97□□□□□ -1.13
CD44-205ENST00000352818 DSELQ8IZU8 1212 aa7.97□□□□□ -1.13
CD44-205ENST00000352818 ZSCAN1Q8NBB4 408 aa7.97□□□□□ -1.13
CD44-205ENST00000352818 CHST14Q8NCH0 376 aa7.97□□□□□ -1.13
CD44-205ENST00000352818 DDHD1Q8NEL9 900 aa7.97□□□□□ -1.13
CD44-205ENST00000352818 TRPC4APQ8TEL6 797 aa7.97□□□□□ -1.13
CD44-205ENST00000352818 RCN3Q96D15 328 aa7.97□□□□□ -1.13
CD44-205ENST00000352818 CLPTM1LQ96KA5 538 aa7.97□□□□□ -1.13
CD44-205ENST00000352818 PPP1R36Q96LQ0 422 aa7.97□□□□□ -1.13
CD44-205ENST00000352818 C3orf30Q96M34 536 aa7.97□□□□□ -1.13
CD44-205ENST00000352818 VPS35Q96QK1 796 aa7.97□□□□□ -1.13
CD44-205ENST00000352818 BRINP2Q9C0B6 783 aa7.97□□□□□ -1.13
CD44-205ENST00000352818 TUBB1Q9H4B7 451 aa7.97□□□□□ -1.13
CD44-205ENST00000352818 MTG2Q9H4K7 406 aa7.97□□□□□ -1.13
CD44-205ENST00000352818 SARS2Q9NP81 518 aaKnown RBP7.97□□□□□ -1.13
CD44-205ENST00000352818 RIC8BQ9NVN3 520 aa7.97□□□□□ -1.13
CD44-205ENST00000352818 POLG2Q9UHN1 485 aa7.97□□□□□ -1.13
CD44-205ENST00000352818 ITGB1BP2Q9UKP3 347 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms