RNA–Protein interactions for RNA: ENST00000351487.5

UPF3A-201, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3A, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-201ENST00000351487 HSD3B2P26439 372 aa21.44■■□□□ 1.02
UPF3A-201ENST00000351487 ETV3P41162 512 aa21.44■■□□□ 1.02
UPF3A-201ENST00000351487 ISL1P61371 349 aa21.44■■□□□ 1.02
UPF3A-201ENST00000351487 TMEM215Q68D42 235 aa21.44■■□□□ 1.02
UPF3A-201ENST00000351487 ERICH5Q6P6B1 374 aa21.44■■□□□ 1.02
UPF3A-201ENST00000351487 THOC6Q86W42 341 aaKnown RBP21.44■■□□□ 1.02
UPF3A-201ENST00000351487 CROCCP3Q8IVE0 287 aa21.44■■□□□ 1.02
UPF3A-201ENST00000351487 SPARTQ8N0X7 666 aa21.44■■□□□ 1.02
UPF3A-201ENST00000351487 OR7A2PQ8NGA2 310 aa21.44■■□□□ 1.02
UPF3A-201ENST00000351487 ATL1Q8WXF7 558 aa21.44■■□□□ 1.02
UPF3A-201ENST00000351487 PANX1Q96RD7 426 aa21.44■■□□□ 1.02
UPF3A-201ENST00000351487 PLGRKTQ9HBL7 147 aa21.44■■□□□ 1.02
UPF3A-201ENST00000351487 RUVBL1Q9Y265 456 aaKnown RBP21.44■■□□□ 1.02
UPF3A-201ENST00000351487 TMX2-CTNND1H3BSU7 103 aa21.44■■□□□ 1.02
UPF3A-201ENST00000351487 CLIC1O00299 241 aa21.44■■□□□ 1.02
UPF3A-201ENST00000351487 MATN1P21941 496 aa21.44■■□□□ 1.02
UPF3A-201ENST00000351487 PRKACGP22612 351 aa21.44■■□□□ 1.02
UPF3A-201ENST00000351487 MAP4P27816 1152 aaKnown RBP21.44■■□□□ 1.02
UPF3A-201ENST00000351487 RYKP34925 604 aa21.44■■□□□ 1.02
UPF3A-201ENST00000351487 PPP1R8Q12972 351 aaKnown RBP21.44■■□□□ 1.02
UPF3A-201ENST00000351487 VMACQ2NL98 169 aa21.44■■□□□ 1.02
UPF3A-201ENST00000351487 XKR6Q5GH73 641 aa21.44■■□□□ 1.02
UPF3A-201ENST00000351487 FGD3Q5JSP0 725 aa21.44■■□□□ 1.02
UPF3A-201ENST00000351487 GTF2IRD2BQ6EKJ0 949 aa21.44■■□□□ 1.02
UPF3A-201ENST00000351487 LAIR2Q6ISS4 152 aa21.44■■□□□ 1.02
UPF3A-201ENST00000351487 GTF2IRD2Q86UP8 949 aa21.44■■□□□ 1.02
UPF3A-201ENST00000351487 ZZZ3Q8IYH5 903 aa21.44■■□□□ 1.02
UPF3A-201ENST00000351487 FAM81AQ8TBF8 368 aa21.44■■□□□ 1.02
UPF3A-201ENST00000351487 FBLIM1Q8WUP2 373 aa21.44■■□□□ 1.02
UPF3A-201ENST00000351487 CLP1Q92989 425 aaKnown RBP21.44■■□□□ 1.02
UPF3A-201ENST00000351487 GLMNQ92990 594 aa21.44■■□□□ 1.02
UPF3A-201ENST00000351487 TCEAL4Q96EI5 215 aa21.44■■□□□ 1.02
UPF3A-201ENST00000351487 IL1RAPQ9NPH3 570 aa21.44■■□□□ 1.02
UPF3A-201ENST00000351487 VNN3Q9NY84 501 aa21.44■■□□□ 1.02
UPF3A-201ENST00000351487 NUP214P35658 2090 aaPredicted RBP21.44■■□□□ 1.02
UPF3A-201ENST00000351487 A0A0J9YVX5 310 aa21.43■■□□□ 1.02
UPF3A-201ENST00000351487 TMEM202A6NGA9 273 aa21.43■■□□□ 1.02
UPF3A-201ENST00000351487 OR2AG2A6NM03 316 aa21.43■■□□□ 1.02
UPF3A-201ENST00000351487 H0YIV9 168 aa21.43■■□□□ 1.02
UPF3A-201ENST00000351487 EPN2O95208 641 aa21.43■■□□□ 1.02
UPF3A-201ENST00000351487 SEMG1P04279 462 aa21.43■■□□□ 1.02
UPF3A-201ENST00000351487 HTR1AP08908 422 aa21.43■■□□□ 1.02
UPF3A-201ENST00000351487 TIMP2P16035 220 aa21.43■■□□□ 1.02
UPF3A-201ENST00000351487 HNF4AP41235 474 aa21.43■■□□□ 1.02
UPF3A-201ENST00000351487 MEP1AQ16819 746 aa21.43■■□□□ 1.02
UPF3A-201ENST00000351487 GRHL2Q6ISB3 625 aa21.43■■□□□ 1.02
UPF3A-201ENST00000351487 STARD8Q92502 1023 aa21.43■■□□□ 1.02
UPF3A-201ENST00000351487 SNX19Q92543 992 aa21.43■■□□□ 1.02
UPF3A-201ENST00000351487 MRGPRX3Q96LB0 322 aa21.43■■□□□ 1.02
UPF3A-201ENST00000351487 VPS35Q96QK1 796 aa21.43■■□□□ 1.02
UPF3A-201ENST00000351487 RIOK2Q9BVS4 552 aaKnown RBP21.43■■□□□ 1.02
UPF3A-201ENST00000351487 TDP1Q9NUW8 608 aa21.43■■□□□ 1.02
UPF3A-201ENST00000351487 NAALAD2Q9Y3Q0 740 aa21.43■■□□□ 1.02
UPF3A-201ENST00000351487 ORC6Q9Y5N6 252 aa21.43■■□□□ 1.02
UPF3A-201ENST00000351487 E7EQ34 232 aa21.43■■□□□ 1.02
UPF3A-201ENST00000351487 MOSPD3O75425 235 aa21.43■■□□□ 1.02
UPF3A-201ENST00000351487 KCNK5O95279 499 aa21.43■■□□□ 1.02
UPF3A-201ENST00000351487 CSF2RAP15509 400 aa21.43■■□□□ 1.02
UPF3A-201ENST00000351487 ENGP17813 658 aa21.43■■□□□ 1.02
UPF3A-201ENST00000351487 ENTPD1P49961 510 aa21.43■■□□□ 1.02
UPF3A-201ENST00000351487 SPIDRQ14159 915 aa21.43■■□□□ 1.02
UPF3A-201ENST00000351487 DOC2AQ14183 400 aa21.43■■□□□ 1.02
UPF3A-201ENST00000351487 TEAD2Q15562 447 aa21.43■■□□□ 1.02
UPF3A-201ENST00000351487 BTN2A2Q8WVV5 523 aa21.43■■□□□ 1.02
UPF3A-201ENST00000351487 CCDC138Q96M89 665 aa21.43■■□□□ 1.02
UPF3A-201ENST00000351487 BRF2Q9HAW0 419 aa21.43■■□□□ 1.02
UPF3A-201ENST00000351487 STOX2Q9P2F5 926 aaPredicted RBP21.43■■□□□ 1.02
UPF3A-201ENST00000351487 U3KQV3 271 aa21.43■■□□□ 1.02
UPF3A-201ENST00000351487 MAGEB17A8MXT2 336 aa21.42■■□□□ 1.02
UPF3A-201ENST00000351487 FGF19O95750 216 aa21.42■■□□□ 1.02
UPF3A-201ENST00000351487 COX7A2P14406 83 aa21.42■■□□□ 1.02
UPF3A-201ENST00000351487 LDLRAP1Q5SW96 308 aa21.42■■□□□ 1.02
UPF3A-201ENST00000351487 ZCCHC8Q6NZY4 707 aaKnown RBP21.42■■□□□ 1.02
UPF3A-201ENST00000351487 AGTRAPQ6RW13 159 aa21.42■■□□□ 1.02
UPF3A-201ENST00000351487 DPPA4Q7L190 304 aa21.42■■□□□ 1.02
UPF3A-201ENST00000351487 RAVER1Q8IY67 606 aaKnown RBP21.42■■□□□ 1.02
UPF3A-201ENST00000351487 RAB2BQ8WUD1 216 aa21.42■■□□□ 1.02
UPF3A-201ENST00000351487 MYLIPQ8WY64 445 aa21.42■■□□□ 1.02
UPF3A-201ENST00000351487 ZNF566Q969W8 418 aa21.42■■□□□ 1.02
UPF3A-201ENST00000351487 THAP11Q96EK4 314 aa21.42■■□□□ 1.02
UPF3A-201ENST00000351487 LHPPQ9H008 270 aa21.42■■□□□ 1.02
UPF3A-201ENST00000351487 TM9SF3Q9HD45 589 aa21.42■■□□□ 1.02
UPF3A-201ENST00000351487 TSPAN6O43657 245 aa21.41■■□□□ 1.02
UPF3A-201ENST00000351487 ZNF682O95780 498 aa21.41■■□□□ 1.02
UPF3A-201ENST00000351487 POLR2EP19388 210 aaKnown RBP21.41■■□□□ 1.02
UPF3A-201ENST00000351487 ITGB8P26012 769 aa21.41■■□□□ 1.02
UPF3A-201ENST00000351487 PRLHRP49683 370 aa21.41■■□□□ 1.02
UPF3A-201ENST00000351487 NFATC3Q12968 1075 aa21.41■■□□□ 1.02
UPF3A-201ENST00000351487 ZNF284Q2VY69 593 aa21.41■■□□□ 1.02
UPF3A-201ENST00000351487 SYTL3Q4VX76 610 aa21.41■■□□□ 1.02
UPF3A-201ENST00000351487 ARSIQ5FYB1 569 aa21.41■■□□□ 1.02
UPF3A-201ENST00000351487 LY6G5CQ5SRR4 150 aa21.41■■□□□ 1.02
UPF3A-201ENST00000351487 ZNF648Q5T619 568 aaPredicted RBP21.41■■□□□ 1.02
UPF3A-201ENST00000351487 OR2T5Q6IEZ7 315 aa21.41■■□□□ 1.02
UPF3A-201ENST00000351487 TECPR1Q7Z6L1 1165 aa21.41■■□□□ 1.02
UPF3A-201ENST00000351487 CPA6Q8N4T0 437 aa21.41■■□□□ 1.02
UPF3A-201ENST00000351487 OR10Q1Q8NGQ4 319 aa21.41■■□□□ 1.02
UPF3A-201ENST00000351487 OR2T29Q8NH02 315 aa21.41■■□□□ 1.02
UPF3A-201ENST00000351487 SGCDQ92629 289 aa21.41■■□□□ 1.02
UPF3A-201ENST00000351487 TMEM159Q96B96 161 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms