RNA–Protein interactions for RNA: ENST00000348225.6

PTN-201, Transcript of pleiotrophin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTN, Length 1,614 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-201ENST00000348225 ACPPP15309 386 aa18.01■□□□□ 0.47
PTN-201ENST00000348225 PHEXP78562 749 aa18.01■□□□□ 0.47
PTN-201ENST00000348225 EIF2B5Q13144 721 aaKnown RBP18.01■□□□□ 0.47
PTN-201ENST00000348225 DDX39BQ13838 428 aaKnown RBP18.01■□□□□ 0.47
PTN-201ENST00000348225 FZD2Q14332 565 aa18.01■□□□□ 0.47
PTN-201ENST00000348225 BLOC1S3Q6QNY0 202 aa18.01■□□□□ 0.47
PTN-201ENST00000348225 IQCHQ86VS3 1027 aa18.01■□□□□ 0.47
PTN-201ENST00000348225 SCUBE1Q8IWY4 988 aa18.01■□□□□ 0.47
PTN-201ENST00000348225 DSELQ8IZU8 1212 aa18.01■□□□□ 0.47
PTN-201ENST00000348225 KRT78Q8N1N4 520 aa18.01■□□□□ 0.47
PTN-201ENST00000348225 PCYOX1LQ8NBM8 494 aa18.01■□□□□ 0.47
PTN-201ENST00000348225 GPBAR1Q8TDU6 330 aa18.01■□□□□ 0.47
PTN-201ENST00000348225 CXorf40BQ96DE9 158 aa18.01■□□□□ 0.47
PTN-201ENST00000348225 METTL2AQ96IZ6 378 aaKnown RBP18.01■□□□□ 0.47
PTN-201ENST00000348225 NPAS2Q99743 824 aa18.01■□□□□ 0.47
PTN-201ENST00000348225 PRPF19Q9UMS4 504 aaKnown RBP18.01■□□□□ 0.47
PTN-201ENST00000348225 INVSQ9Y283 1065 aa18.01■□□□□ 0.47
PTN-201ENST00000348225 NDUFAF1Q9Y375 327 aa18.01■□□□□ 0.47
PTN-201ENST00000348225 DYTNA2CJ06 578 aa18.01■□□□□ 0.47
PTN-201ENST00000348225 FAM234BA2RU67 622 aa18.01■□□□□ 0.47
PTN-201ENST00000348225 A6NCN8 305 aa18.01■□□□□ 0.47
PTN-201ENST00000348225 K7ESF4 209 aa18.01■□□□□ 0.47
PTN-201ENST00000348225 ANGPT2O15123 496 aa18.01■□□□□ 0.47
PTN-201ENST00000348225 PRPS2P11908 318 aa18.01■□□□□ 0.47
PTN-201ENST00000348225 CDH1P12830 882 aa18.01■□□□□ 0.47
PTN-201ENST00000348225 CXCR2P25025 360 aa18.01■□□□□ 0.47
PTN-201ENST00000348225 SHMT2P34897 504 aa18.01■□□□□ 0.47
PTN-201ENST00000348225 RAP1GDS1P52306 607 aa18.01■□□□□ 0.47
PTN-201ENST00000348225 UFM1P61960 85 aa18.01■□□□□ 0.47
PTN-201ENST00000348225 ZXDAP98168 799 aa18.01■□□□□ 0.47
PTN-201ENST00000348225 RCAN2Q14206 197 aa18.01■□□□□ 0.47
PTN-201ENST00000348225 TCEA2Q15560 299 aa18.01■□□□□ 0.47
PTN-201ENST00000348225 COQ5Q5HYK3 327 aa18.01■□□□□ 0.47
PTN-201ENST00000348225 NRROSQ86YC3 692 aa18.01■□□□□ 0.47
PTN-201ENST00000348225 LAS2Q8IYD9 372 aa18.01■□□□□ 0.47
PTN-201ENST00000348225 ULK2Q8IYT8 1036 aa18.01■□□□□ 0.47
PTN-201ENST00000348225 PGAM4Q8N0Y7 254 aa18.01■□□□□ 0.47
PTN-201ENST00000348225 LINC01555Q8NAE3 123 aa18.01■□□□□ 0.47
PTN-201ENST00000348225 FAM13CQ8NE31 585 aa18.01■□□□□ 0.47
PTN-201ENST00000348225 MTERF1Q99551 399 aaKnown RBP18.01■□□□□ 0.47
PTN-201ENST00000348225 ZBTB18Q99592 522 aa18.01■□□□□ 0.47
PTN-201ENST00000348225 ACAT2Q9BWD1 397 aa18.01■□□□□ 0.47
PTN-201ENST00000348225 SPATA6Q9NWH7 488 aaPredicted RBP18.01■□□□□ 0.47
PTN-201ENST00000348225 NMRK1Q9NWW6 199 aa18.01■□□□□ 0.47
PTN-201ENST00000348225 VPS29Q9UBQ0 182 aa18.01■□□□□ 0.47
PTN-201ENST00000348225 ICKQ9UPZ9 632 aa18.01■□□□□ 0.47
PTN-201ENST00000348225 A0A1W2PPV9 198 aa18■□□□□ 0.47
PTN-201ENST00000348225 MRASO14807 208 aa18■□□□□ 0.47
PTN-201ENST00000348225 MAP3K13O43283 966 aa18■□□□□ 0.47
PTN-201ENST00000348225 CIB2O75838 187 aa18■□□□□ 0.47
PTN-201ENST00000348225 EML2O95834 649 aa18■□□□□ 0.47
PTN-201ENST00000348225 CTSEP14091 401 aa18■□□□□ 0.47
PTN-201ENST00000348225 JAK1P23458 1154 aa18■□□□□ 0.47
PTN-201ENST00000348225 CD38P28907 300 aa18■□□□□ 0.47
PTN-201ENST00000348225 POLR2JP52435 117 aaKnown RBP18■□□□□ 0.47
PTN-201ENST00000348225 RACK1P63244 317 aaKnown RBP18■□□□□ 0.47
PTN-201ENST00000348225 TBL3Q12788 808 aaKnown RBP18■□□□□ 0.47
PTN-201ENST00000348225 KIAA0040Q15053 153 aa18■□□□□ 0.47
PTN-201ENST00000348225 MAMSTRQ6ZN01 415 aa18■□□□□ 0.47
PTN-201ENST00000348225 LIX1Q8N485 282 aa18■□□□□ 0.47
PTN-201ENST00000348225 DEFB119Q8N690 84 aa18■□□□□ 0.47
PTN-201ENST00000348225 HUS1BQ8NHY5 278 aa18■□□□□ 0.47
PTN-201ENST00000348225 SPDL1Q96EA4 605 aa18■□□□□ 0.47
PTN-201ENST00000348225 AIF1LQ9BQI0 150 aa18■□□□□ 0.47
PTN-201ENST00000348225 XKR8Q9H6D3 395 aa18■□□□□ 0.47
PTN-201ENST00000348225 WDR41Q9HAD4 459 aa18■□□□□ 0.47
PTN-201ENST00000348225 TSC22D4Q9Y3Q8 395 aa18■□□□□ 0.47
PTN-201ENST00000348225 PCDHB11Q9Y5F2 797 aa18■□□□□ 0.47
PTN-201ENST00000348225 PCM1Q15154 2024 aa18■□□□□ 0.47
PTN-201ENST00000348225 FANCMQ8IYD8 2048 aa17.99■□□□□ 0.47
PTN-201ENST00000348225 FOXE1O00358 373 aaPredicted RBP17.99■□□□□ 0.47
PTN-201ENST00000348225 FBP2O00757 339 aa17.99■□□□□ 0.47
PTN-201ENST00000348225 CCR8P51685 355 aa17.99■□□□□ 0.47
PTN-201ENST00000348225 C6orf163Q5TEZ5 329 aa17.99■□□□□ 0.47
PTN-201ENST00000348225 HACD2Q6Y1H2 254 aa17.99■□□□□ 0.47
PTN-201ENST00000348225 TRIM48Q8IWZ4 208 aa17.99■□□□□ 0.47
PTN-201ENST00000348225 GLB1L3Q8NCI6 653 aaPredicted RBP17.99■□□□□ 0.47
PTN-201ENST00000348225 ABHD11Q8NFV4 315 aa17.99■□□□□ 0.47
PTN-201ENST00000348225 PROKR1Q8TCW9 393 aa17.99■□□□□ 0.47
PTN-201ENST00000348225 ROPN1LQ96C74 230 aa17.99■□□□□ 0.47
PTN-201ENST00000348225 SERPINI1Q99574 410 aa17.99■□□□□ 0.47
PTN-201ENST00000348225 PITHD1Q9GZP4 211 aaPredicted RBP17.99■□□□□ 0.47
PTN-201ENST00000348225 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.99■□□□□ 0.47
PTN-201ENST00000348225 A0A1W2PP18 115 aa17.98■□□□□ 0.47
PTN-201ENST00000348225 CCDC154A6NI56 674 aa17.98■□□□□ 0.47
PTN-201ENST00000348225 OR5K4A6NMS3 321 aa17.98■□□□□ 0.47
PTN-201ENST00000348225 MAGEB17A8MXT2 336 aa17.98■□□□□ 0.47
PTN-201ENST00000348225 MGRN1O60291 552 aa17.98■□□□□ 0.47
PTN-201ENST00000348225 MYO1DO94832 1006 aa17.98■□□□□ 0.47
PTN-201ENST00000348225 CCNDBP1O95273 360 aa17.98■□□□□ 0.47
PTN-201ENST00000348225 BCKDHAP12694 445 aa17.98■□□□□ 0.47
PTN-201ENST00000348225 AMD1P17707 334 aa17.98■□□□□ 0.47
PTN-201ENST00000348225 CAPN3P20807 821 aa17.98■□□□□ 0.47
PTN-201ENST00000348225 WASHC2DQ5SRD0 308 aa17.98■□□□□ 0.47
PTN-201ENST00000348225 FBXW10Q5XX13 1052 aa17.98■□□□□ 0.47
PTN-201ENST00000348225 ICE2Q659A1 982 aa17.98■□□□□ 0.47
PTN-201ENST00000348225 TMIGD1Q6UXZ0 262 aa17.98■□□□□ 0.47
PTN-201ENST00000348225 BNC2Q6ZN30 1099 aaPredicted RBP17.98■□□□□ 0.47
PTN-201ENST00000348225 FAM129CQ86XR2 697 aa17.98■□□□□ 0.47
PTN-201ENST00000348225 LCN9Q8WX39 176 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms