RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 ANGPTL3Q9Y5C1 460 aa5.85□□□□□ -1.47
CLCN3-201ENST00000347613 TNPO3Q9Y5L0 923 aaKnown RBP5.85□□□□□ -1.47
CLCN3-201ENST00000347613 MAGEB17A8MXT2 336 aa5.85□□□□□ -1.47
CLCN3-201ENST00000347613 NEDD8-MDP1E9PL57 170 aa5.85□□□□□ -1.47
CLCN3-201ENST00000347613 H0YAE9 185 aa5.85□□□□□ -1.47
CLCN3-201ENST00000347613 J3KTA2 159 aa5.85□□□□□ -1.47
CLCN3-201ENST00000347613 ZNF682O95780 498 aa5.85□□□□□ -1.47
CLCN3-201ENST00000347613 RECKO95980 971 aa5.85□□□□□ -1.47
CLCN3-201ENST00000347613 NPPAP01160 153 aa5.85□□□□□ -1.47
CLCN3-201ENST00000347613 VIPP01282 170 aa5.85□□□□□ -1.47
CLCN3-201ENST00000347613 OPN1SWP03999 348 aa5.85□□□□□ -1.47
CLCN3-201ENST00000347613 CSF2RAP15509 400 aa5.85□□□□□ -1.47
CLCN3-201ENST00000347613 ENGP17813 658 aa5.85□□□□□ -1.47
CLCN3-201ENST00000347613 ITGALP20701 1170 aa5.85□□□□□ -1.47
CLCN3-201ENST00000347613 CALRP27797 417 aaKnown RBP5.85□□□□□ -1.47
CLCN3-201ENST00000347613 GRK5P34947 590 aa5.85□□□□□ -1.47
CLCN3-201ENST00000347613 MVDP53602 400 aa5.85□□□□□ -1.47
CLCN3-201ENST00000347613 VAC14Q08AM6 782 aa5.85□□□□□ -1.47
CLCN3-201ENST00000347613 BFSP2Q13515 415 aa5.85□□□□□ -1.47
CLCN3-201ENST00000347613 LRRC23Q53EV4 343 aaPredicted RBP5.85□□□□□ -1.47
CLCN3-201ENST00000347613 CATSPEREQ5SY80 951 aa5.85□□□□□ -1.47
CLCN3-201ENST00000347613 MFSD4BQ5TF39 518 aa5.85□□□□□ -1.47
CLCN3-201ENST00000347613 C22orf39Q6P5X5 142 aa5.85□□□□□ -1.47
CLCN3-201ENST00000347613 TPRG1Q6ZUI0 275 aa5.85□□□□□ -1.47
CLCN3-201ENST00000347613 CYP2U1Q7Z449 544 aa5.85□□□□□ -1.47
CLCN3-201ENST00000347613 THAP5Q7Z6K1 395 aa5.85□□□□□ -1.47
CLCN3-201ENST00000347613 FAM124AQ86V42 546 aa5.85□□□□□ -1.47
CLCN3-201ENST00000347613 ZDHHC13Q8IUH4 622 aa5.85□□□□□ -1.47
CLCN3-201ENST00000347613 RASGRP3Q8IV61 690 aa5.85□□□□□ -1.47
CLCN3-201ENST00000347613 STK40Q8N2I9 435 aa5.85□□□□□ -1.47
CLCN3-201ENST00000347613 C2orf73Q8N5S3 287 aaPredicted RBP5.85□□□□□ -1.47
CLCN3-201ENST00000347613 ZNF740Q8NDX6 193 aa5.85□□□□□ -1.47
CLCN3-201ENST00000347613 FBLIM1Q8WUP2 373 aa5.85□□□□□ -1.47
CLCN3-201ENST00000347613 SH3KBP1Q96B97 665 aa5.85□□□□□ -1.47
CLCN3-201ENST00000347613 PYURFQ96I23 114 aa5.85□□□□□ -1.47
CLCN3-201ENST00000347613 MRGPRX3Q96LB0 322 aa5.85□□□□□ -1.47
CLCN3-201ENST00000347613 MCCC1Q96RQ3 725 aaPredicted RBP5.85□□□□□ -1.47
CLCN3-201ENST00000347613 LYSMD1Q96S90 227 aa5.85□□□□□ -1.47
CLCN3-201ENST00000347613 CDK5RAP1Q96SZ6 601 aaKnown RBP5.85□□□□□ -1.47
CLCN3-201ENST00000347613 CORO1BQ9BR76 489 aa5.85□□□□□ -1.47
CLCN3-201ENST00000347613 SLC12A9Q9BXP2 914 aa5.85□□□□□ -1.47
CLCN3-201ENST00000347613 RDH14Q9HBH5 336 aa5.85□□□□□ -1.47
CLCN3-201ENST00000347613 MRGBPQ9NV56 204 aa5.85□□□□□ -1.47
CLCN3-201ENST00000347613 ZDHHC3Q9NYG2 299 aa5.85□□□□□ -1.47
CLCN3-201ENST00000347613 DNAJB9Q9UBS3 223 aa5.85□□□□□ -1.47
CLCN3-201ENST00000347613 WASHC1A8K0Z3 465 aa5.85□□□□□ -1.47
CLCN3-201ENST00000347613 TSPAN6O43657 245 aa5.85□□□□□ -1.47
CLCN3-201ENST00000347613 PCDH7O60245 1069 aa5.85□□□□□ -1.47
CLCN3-201ENST00000347613 WBP4O75554 376 aaKnown RBP5.85□□□□□ -1.47
CLCN3-201ENST00000347613 LEFTY1O75610 366 aa5.85□□□□□ -1.47
CLCN3-201ENST00000347613 ARHGEF15O94989 841 aa5.85□□□□□ -1.47
CLCN3-201ENST00000347613 STAMBPO95630 424 aa5.85□□□□□ -1.47
CLCN3-201ENST00000347613 TBX6O95947 436 aaPredicted RBP5.85□□□□□ -1.47
CLCN3-201ENST00000347613 IL6P05231 212 aa5.85□□□□□ -1.47
CLCN3-201ENST00000347613 OPRL1P41146 370 aa5.85□□□□□ -1.47
CLCN3-201ENST00000347613 NSG1P42857 185 aa5.85□□□□□ -1.47
CLCN3-201ENST00000347613 MAGEA2P43356 314 aa5.85□□□□□ -1.47
CLCN3-201ENST00000347613 OR1E2P47887 323 aa5.85□□□□□ -1.47
CLCN3-201ENST00000347613 CSNK1DP48730 415 aa5.85□□□□□ -1.47
CLCN3-201ENST00000347613 CCR3P51677 355 aa5.85□□□□□ -1.47
CLCN3-201ENST00000347613 NAA20P61599 178 aa5.85□□□□□ -1.47
CLCN3-201ENST00000347613 GRSF1Q12849 480 aaKnown RBP eCLIP5.85□□□□□ -1.47
CLCN3-201ENST00000347613 CHIT1Q13231 466 aa5.85□□□□□ -1.47
CLCN3-201ENST00000347613 DOC2AQ14183 400 aa5.85□□□□□ -1.47
CLCN3-201ENST00000347613 TCEAL5Q5H9L2 206 aa5.85□□□□□ -1.47
CLCN3-201ENST00000347613 TMEM236Q5W0B7 351 aa5.85□□□□□ -1.47
CLCN3-201ENST00000347613 PDE12Q6L8Q7 609 aaKnown RBP5.85□□□□□ -1.47
CLCN3-201ENST00000347613 ZCCHC8Q6NZY4 707 aaKnown RBP5.85□□□□□ -1.47
CLCN3-201ENST00000347613 GALNT18Q6P9A2 607 aa5.85□□□□□ -1.47
CLCN3-201ENST00000347613 WASH2PQ6VEQ5 465 aa5.85□□□□□ -1.47
CLCN3-201ENST00000347613 SLC39A5Q6ZMH5 540 aa5.85□□□□□ -1.47
CLCN3-201ENST00000347613 ZNF783Q6ZMS7 281 aa5.85□□□□□ -1.47
CLCN3-201ENST00000347613 SVIPQ8NHG7 77 aa5.85□□□□□ -1.47
CLCN3-201ENST00000347613 CDC26Q8NHZ8 85 aa5.85□□□□□ -1.47
CLCN3-201ENST00000347613 OSCP1Q8WVF1 389 aa5.85□□□□□ -1.47
CLCN3-201ENST00000347613 NCLNQ969V3 563 aa5.85□□□□□ -1.47
CLCN3-201ENST00000347613 CIDECQ96AQ7 238 aaPredicted RBP5.85□□□□□ -1.47
CLCN3-201ENST00000347613 ABCG4Q9H172 646 aa5.85□□□□□ -1.47
CLCN3-201ENST00000347613 KCNH6Q9H252 994 aa5.85□□□□□ -1.47
CLCN3-201ENST00000347613 AMBNQ9NP70 447 aa5.85□□□□□ -1.47
CLCN3-201ENST00000347613 MRPL17Q9NRX2 175 aaKnown RBP5.85□□□□□ -1.47
CLCN3-201ENST00000347613 RASSF1Q9NS23 344 aa5.85□□□□□ -1.47
CLCN3-201ENST00000347613 ACSL6Q9UKU0 697 aa5.85□□□□□ -1.47
CLCN3-201ENST00000347613 EIF3LQ9Y262 564 aaKnown RBP5.85□□□□□ -1.47
CLCN3-201ENST00000347613 MAN2B2Q9Y2E5 1009 aa5.85□□□□□ -1.47
CLCN3-201ENST00000347613 PPIL1Q9Y3C6 166 aa5.85□□□□□ -1.47
CLCN3-201ENST00000347613 PCDHGA10Q9Y5H3 936 aa5.85□□□□□ -1.47
CLCN3-201ENST00000347613 GOLGA4Q13439 2230 aaKnown RBP5.84□□□□□ -1.47
CLCN3-201ENST00000347613 GSTA4O15217 222 aa5.84□□□□□ -1.47
CLCN3-201ENST00000347613 PCDHGA12O60330 932 aa5.84□□□□□ -1.47
CLCN3-201ENST00000347613 ABCB7O75027 752 aa5.84□□□□□ -1.47
CLCN3-201ENST00000347613 CPSF4O95639 269 aaKnown RBP5.84□□□□□ -1.47
CLCN3-201ENST00000347613 SLC16A8O95907 504 aa5.84□□□□□ -1.47
CLCN3-201ENST00000347613 SOD1P00441 154 aa5.84□□□□□ -1.47
CLCN3-201ENST00000347613 ATP1B2P14415 290 aaPredicted RBP5.84□□□□□ -1.47
CLCN3-201ENST00000347613 JUNBP17275 347 aaPredicted RBP5.84□□□□□ -1.47
CLCN3-201ENST00000347613 ENPP1P22413 925 aa5.84□□□□□ -1.47
CLCN3-201ENST00000347613 VBP1P61758 197 aa5.84□□□□□ -1.47
CLCN3-201ENST00000347613 IL1RL1Q01638 556 aa5.84□□□□□ -1.47
CLCN3-201ENST00000347613 HKDC1Q2TB90 917 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms