RNA–Protein interactions for RNA: ENST00000346569.6

ECM1-201, Transcript of extracellular matrix protein 1, humanhuman

TSL 1 (best) BASIC

Gene ECM1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-201ENST00000346569 FOXE1O00358 373 aaPredicted RBP10.58□□□□□ -0.72
ECM1-201ENST00000346569 ANKRD28O15084 1053 aa10.58□□□□□ -0.72
ECM1-201ENST00000346569 RSL1D1O76021 490 aaKnown RBP10.58□□□□□ -0.72
ECM1-201ENST00000346569 CELA2BP08218 269 aaPredicted RBP10.58□□□□□ -0.72
ECM1-201ENST00000346569 HSD3B1P14060 373 aa10.58□□□□□ -0.72
ECM1-201ENST00000346569 HSD3B2P26439 372 aa10.58□□□□□ -0.72
ECM1-201ENST00000346569 ZFP36L2P47974 494 aaKnown RBP10.58□□□□□ -0.72
ECM1-201ENST00000346569 FNTBP49356 437 aa10.58□□□□□ -0.72
ECM1-201ENST00000346569 CSTF3Q12996 717 aaKnown RBP10.58□□□□□ -0.72
ECM1-201ENST00000346569 LAPTM5Q13571 262 aa10.58□□□□□ -0.72
ECM1-201ENST00000346569 PDCD4Q53EL6 469 aaKnown RBP10.58□□□□□ -0.72
ECM1-201ENST00000346569 C10orf62Q5T681 223 aaPredicted RBP10.58□□□□□ -0.72
ECM1-201ENST00000346569 IL23RQ5VWK5 629 aa10.58□□□□□ -0.72
ECM1-201ENST00000346569 PAOXQ6QHF9 649 aa10.58□□□□□ -0.72
ECM1-201ENST00000346569 TMPRSS11BQ86T26 416 aa10.58□□□□□ -0.72
ECM1-201ENST00000346569 C17orf64Q86WR6 236 aa10.58□□□□□ -0.72
ECM1-201ENST00000346569 ZFAND4Q86XD8 727 aa10.58□□□□□ -0.72
ECM1-201ENST00000346569 SNX32Q86XE0 403 aa10.58□□□□□ -0.72
ECM1-201ENST00000346569 PARP9Q8IXQ6 854 aa10.58□□□□□ -0.72
ECM1-201ENST00000346569 RNF175Q8N4F7 328 aa10.58□□□□□ -0.72
ECM1-201ENST00000346569 KIF2BQ8N4N8 673 aa10.58□□□□□ -0.72
ECM1-201ENST00000346569 RAB42Q8N4Z0 105 aa10.58□□□□□ -0.72
ECM1-201ENST00000346569 FNDC5Q8NAU1 212 aa10.58□□□□□ -0.72
ECM1-201ENST00000346569 TSPEARQ8WU66 669 aa10.58□□□□□ -0.72
ECM1-201ENST00000346569 C11orf24Q96F05 449 aaPredicted RBP10.58□□□□□ -0.72
ECM1-201ENST00000346569 CMTM7Q96FZ5 175 aa10.58□□□□□ -0.72
ECM1-201ENST00000346569 METTL2AQ96IZ6 378 aaKnown RBP10.58□□□□□ -0.72
ECM1-201ENST00000346569 FCRL1Q96LA6 429 aa10.58□□□□□ -0.72
ECM1-201ENST00000346569 TEX37Q96LM6 180 aa10.58□□□□□ -0.72
ECM1-201ENST00000346569 ACAT2Q9BWD1 397 aa10.58□□□□□ -0.72
ECM1-201ENST00000346569 NT5DC2Q9H857 520 aa10.58□□□□□ -0.72
ECM1-201ENST00000346569 PELI2Q9HAT8 420 aa10.58□□□□□ -0.72
ECM1-201ENST00000346569 BRF2Q9HAW0 419 aa10.58□□□□□ -0.72
ECM1-201ENST00000346569 LRTM1Q9HBL6 345 aa10.58□□□□□ -0.72
ECM1-201ENST00000346569 SLC40A1Q9NP59 571 aa10.58□□□□□ -0.72
ECM1-201ENST00000346569 C1orf109Q9NX04 203 aa10.58□□□□□ -0.72
ECM1-201ENST00000346569 ZIM2Q9NZV7 527 aa10.58□□□□□ -0.72
ECM1-201ENST00000346569 PPT2Q9UMR5 302 aa10.58□□□□□ -0.72
ECM1-201ENST00000346569 MUC6Q6W4X9 2439 aa10.58□□□□□ -0.72
ECM1-201ENST00000346569 LRP4O75096 1905 aa10.58□□□□□ -0.72
ECM1-201ENST00000346569 EML5Q05BV3 1969 aa10.58□□□□□ -0.72
ECM1-201ENST00000346569 KIR2DS5A0A0G2JLQ3 304 aa10.58□□□□□ -0.72
ECM1-201ENST00000346569 A0A0G2JNG1 304 aa10.58□□□□□ -0.72
ECM1-201ENST00000346569 MEI4A8MW99 385 aa10.58□□□□□ -0.72
ECM1-201ENST00000346569 KIR2DS3K7RE56 304 aa10.58□□□□□ -0.72
ECM1-201ENST00000346569 VILLO15195 856 aa10.58□□□□□ -0.72
ECM1-201ENST00000346569 GYG2O15488 501 aa10.58□□□□□ -0.72
ECM1-201ENST00000346569 SEC22BO75396 215 aa10.58□□□□□ -0.72
ECM1-201ENST00000346569 SNRPB2P08579 225 aaKnown RBP10.58□□□□□ -0.72
ECM1-201ENST00000346569 CDH1P12830 882 aa10.58□□□□□ -0.72
ECM1-201ENST00000346569 CTSEP14091 401 aa10.58□□□□□ -0.72
ECM1-201ENST00000346569 SLC2A4P14672 509 aa10.58□□□□□ -0.72
ECM1-201ENST00000346569 NME1P15531 152 aaKnown RBP10.58□□□□□ -0.72
ECM1-201ENST00000346569 JUNDP17535 347 aa10.58□□□□□ -0.72
ECM1-201ENST00000346569 IL12AP29459 219 aa10.58□□□□□ -0.72
ECM1-201ENST00000346569 PEBP1P30086 187 aaKnown RBP10.58□□□□□ -0.72
ECM1-201ENST00000346569 NXPH1P58417 271 aa10.58□□□□□ -0.72
ECM1-201ENST00000346569 UBE2IP63279 158 aaKnown RBP10.58□□□□□ -0.72
ECM1-201ENST00000346569 STX5Q13190 355 aa10.58□□□□□ -0.72
ECM1-201ENST00000346569 MAD2L1Q13257 205 aaPredicted RBP10.58□□□□□ -0.72
ECM1-201ENST00000346569 C1orf61Q13536 156 aa10.58□□□□□ -0.72
ECM1-201ENST00000346569 TSTA3Q13630 321 aaPredicted RBP10.58□□□□□ -0.72
ECM1-201ENST00000346569 SLBPQ14493 270 aaKnown RBP eCLIP10.58□□□□□ -0.72
ECM1-201ENST00000346569 KIR2DS5Q14953 304 aa10.58□□□□□ -0.72
ECM1-201ENST00000346569 TCEA2Q15560 299 aa10.58□□□□□ -0.72
ECM1-201ENST00000346569 HIST2H2ACQ16777 129 aaPredicted RBP10.58□□□□□ -0.72
ECM1-201ENST00000346569 IMPG1Q17R60 797 aa10.58□□□□□ -0.72
ECM1-201ENST00000346569 WDR45BQ5MNZ6 344 aa10.58□□□□□ -0.72
ECM1-201ENST00000346569 THEMIS2Q5TEJ8 643 aa10.58□□□□□ -0.72
ECM1-201ENST00000346569 HIST2H2AA3Q6FI13 130 aa10.58□□□□□ -0.72
ECM1-201ENST00000346569 MED27Q6P2C8 311 aa10.58□□□□□ -0.72
ECM1-201ENST00000346569 BLOC1S3Q6QNY0 202 aa10.58□□□□□ -0.72
ECM1-201ENST00000346569 LAYNQ6UX15 382 aa10.58□□□□□ -0.72
ECM1-201ENST00000346569 GK5Q6ZS86 529 aa10.58□□□□□ -0.72
ECM1-201ENST00000346569 TAF8Q7Z7C8 310 aa10.58□□□□□ -0.72
ECM1-201ENST00000346569 ADGRF3Q8IZF5 1079 aa10.58□□□□□ -0.72
ECM1-201ENST00000346569 NAGSQ8N159 534 aa10.58□□□□□ -0.72
ECM1-201ENST00000346569 MIER2Q8N344 545 aa10.58□□□□□ -0.72
ECM1-201ENST00000346569 ZNF740Q8NDX6 193 aa10.58□□□□□ -0.72
ECM1-201ENST00000346569 OR9I1Q8NGQ6 314 aa10.58□□□□□ -0.72
ECM1-201ENST00000346569 PROKR1Q8TCW9 393 aa10.58□□□□□ -0.72
ECM1-201ENST00000346569 CHTF18Q8WVB6 975 aa10.58□□□□□ -0.72
ECM1-201ENST00000346569 MTERF1Q99551 399 aaKnown RBP10.58□□□□□ -0.72
ECM1-201ENST00000346569 SPNS1Q9H2V7 528 aa10.58□□□□□ -0.72
ECM1-201ENST00000346569 ACTL8Q9H568 366 aa10.58□□□□□ -0.72
ECM1-201ENST00000346569 CUEDC1Q9NWM3 386 aaPredicted RBP10.58□□□□□ -0.72
ECM1-201ENST00000346569 OR6C2Q9NZP2 312 aa10.58□□□□□ -0.72
ECM1-201ENST00000346569 CCDC167Q9P0B6 97 aa10.58□□□□□ -0.72
ECM1-201ENST00000346569 VPS29Q9UBQ0 182 aa10.58□□□□□ -0.72
ECM1-201ENST00000346569 TAC3Q9UHF0 121 aa10.58□□□□□ -0.72
ECM1-201ENST00000346569 PCDHB11Q9Y5F2 797 aa10.58□□□□□ -0.72
ECM1-201ENST00000346569 ARHGEF17Q96PE2 2063 aaPredicted RBP10.57□□□□□ -0.72
ECM1-201ENST00000346569 IGKV1-8A0A0C4DH67 115 aa10.57□□□□□ -0.72
ECM1-201ENST00000346569 MAGEB17A8MXT2 336 aa10.57□□□□□ -0.72
ECM1-201ENST00000346569 FBP2O00757 339 aa10.57□□□□□ -0.72
ECM1-201ENST00000346569 LAMTOR5O43504 91 aa10.57□□□□□ -0.72
ECM1-201ENST00000346569 KDM1AO60341 852 aa10.57□□□□□ -0.72
ECM1-201ENST00000346569 KRT16P08779 473 aa10.57□□□□□ -0.72
ECM1-201ENST00000346569 G6PDP11413 515 aa10.57□□□□□ -0.72
ECM1-201ENST00000346569 ACPPP15309 386 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms