RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 OR56A1Q8NGH5 318 aa22.53■■□□□ 1.2
NPAS3-201ENST00000346562 BPIFB1Q8TDL5 484 aa22.53■■□□□ 1.2
NPAS3-201ENST00000346562 A8MU76 341 aa22.53■■□□□ 1.2
NPAS3-201ENST00000346562 PLOD2O00469 737 aa22.53■■□□□ 1.2
NPAS3-201ENST00000346562 WNT7AO00755 349 aa22.53■■□□□ 1.2
NPAS3-201ENST00000346562 PFKMP08237 780 aa22.53■■□□□ 1.2
NPAS3-201ENST00000346562 EEFSECP57772 596 aaKnown RBP22.53■■□□□ 1.2
NPAS3-201ENST00000346562 ZNF280AP59817 542 aaPredicted RBP22.53■■□□□ 1.2
NPAS3-201ENST00000346562 TLE2Q04725 743 aa22.53■■□□□ 1.2
NPAS3-201ENST00000346562 CD47Q08722 323 aa22.53■■□□□ 1.2
NPAS3-201ENST00000346562 OCLNQ16625 522 aa22.53■■□□□ 1.2
NPAS3-201ENST00000346562 GPR153Q6NV75 609 aa22.53■■□□□ 1.2
NPAS3-201ENST00000346562 C12orf42Q96LP6 360 aa22.53■■□□□ 1.2
NPAS3-201ENST00000346562 ZFP3Q96NJ6 502 aa22.53■■□□□ 1.2
NPAS3-201ENST00000346562 SNTG1Q9NSN8 517 aa22.53■■□□□ 1.2
NPAS3-201ENST00000346562 SERTAD3Q9UJW9 196 aa22.53■■□□□ 1.2
NPAS3-201ENST00000346562 TMEM131LA2VDJ0 1609 aa22.53■■□□□ 1.2
NPAS3-201ENST00000346562 ZNF878C9JN71 531 aa22.53■■□□□ 1.2
NPAS3-201ENST00000346562 KLK1P06870 262 aa22.53■■□□□ 1.2
NPAS3-201ENST00000346562 RIN1Q13671 783 aa22.53■■□□□ 1.2
NPAS3-201ENST00000346562 MLIPQ5VWP3 458 aa22.53■■□□□ 1.2
NPAS3-201ENST00000346562 NIPAL1Q6NVV3 410 aa22.53■■□□□ 1.2
NPAS3-201ENST00000346562 BANPQ8N9N5 519 aa22.53■■□□□ 1.2
NPAS3-201ENST00000346562 LRRC57Q8N9N7 239 aa22.53■■□□□ 1.2
NPAS3-201ENST00000346562 ARMC5Q96C12 935 aa22.53■■□□□ 1.2
NPAS3-201ENST00000346562 CTPS2Q9NRF8 586 aa22.53■■□□□ 1.2
NPAS3-201ENST00000346562 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP22.53■■□□□ 1.2
NPAS3-201ENST00000346562 ECI2O75521 394 aa22.53■■□□□ 1.2
NPAS3-201ENST00000346562 MADCAM1Q13477 382 aa22.53■■□□□ 1.2
NPAS3-201ENST00000346562 CHRNA6Q15825 494 aa22.53■■□□□ 1.2
NPAS3-201ENST00000346562 UAP1L1Q3KQV9 507 aa22.53■■□□□ 1.2
NPAS3-201ENST00000346562 C9orf43Q8TAL5 461 aaPredicted RBP22.53■■□□□ 1.2
NPAS3-201ENST00000346562 NCSTNQ92542 709 aa22.53■■□□□ 1.2
NPAS3-201ENST00000346562 BAIAP2Q9UQB8 552 aa22.53■■□□□ 1.2
NPAS3-201ENST00000346562 HOXB2P14652 356 aa22.53■■□□□ 1.2
NPAS3-201ENST00000346562 RBM34P42696 430 aaKnown RBP22.53■■□□□ 1.2
NPAS3-201ENST00000346562 MECP2P51608 486 aaKnown RBP22.53■■□□□ 1.2
NPAS3-201ENST00000346562 NR4A3Q92570 626 aa22.53■■□□□ 1.2
NPAS3-201ENST00000346562 GFM1Q96RP9 751 aaKnown RBP22.53■■□□□ 1.2
NPAS3-201ENST00000346562 SMURF1Q9HCE7 757 aa22.53■■□□□ 1.2
NPAS3-201ENST00000346562 CCL5P13501 91 aa22.52■■□□□ 1.2
NPAS3-201ENST00000346562 PRKCDQ05655 676 aa22.52■■□□□ 1.2
NPAS3-201ENST00000346562 LACTB2Q53H82 288 aaPredicted RBP22.52■■□□□ 1.2
NPAS3-201ENST00000346562 TMEM214Q6NUQ4 689 aaKnown RBP22.52■■□□□ 1.2
NPAS3-201ENST00000346562 OR8H1Q8NGG4 311 aa22.52■■□□□ 1.2
NPAS3-201ENST00000346562 LRRC46Q96FV0 321 aa22.52■■□□□ 1.2
NPAS3-201ENST00000346562 SEC61A2Q9H9S3 476 aa22.52■■□□□ 1.2
NPAS3-201ENST00000346562 IFNA21P01568 189 aa22.52■■□□□ 1.2
NPAS3-201ENST00000346562 GP1BBP13224 206 aa22.52■■□□□ 1.2
NPAS3-201ENST00000346562 GADD45AP24522 165 aa22.52■■□□□ 1.2
NPAS3-201ENST00000346562 DNAJA1P31689 397 aaKnown RBP22.52■■□□□ 1.2
NPAS3-201ENST00000346562 GDF10P55107 478 aa22.52■■□□□ 1.2
NPAS3-201ENST00000346562 IRF9Q00978 393 aa22.52■■□□□ 1.2
NPAS3-201ENST00000346562 ARMCX6Q7L4S7 300 aa22.52■■□□□ 1.2
NPAS3-201ENST00000346562 ZSCAN1Q8NBB4 408 aa22.52■■□□□ 1.2
NPAS3-201ENST00000346562 STRADBQ9C0K7 418 aa22.52■■□□□ 1.2
NPAS3-201ENST00000346562 POLR2J2Q9GZM3 115 aaKnown RBP22.52■■□□□ 1.2
NPAS3-201ENST00000346562 TEX13CA0A0J9YWL9 993 aa22.52■■□□□ 1.2
NPAS3-201ENST00000346562 SLC6A4P31645 630 aa22.52■■□□□ 1.2
NPAS3-201ENST00000346562 NRLP54845 237 aa22.52■■□□□ 1.2
NPAS3-201ENST00000346562 CSTF1Q05048 431 aaKnown RBP22.52■■□□□ 1.2
NPAS3-201ENST00000346562 HERC3Q15034 1050 aa22.52■■□□□ 1.2
NPAS3-201ENST00000346562 DUOXA1Q1HG43 343 aa22.52■■□□□ 1.2
NPAS3-201ENST00000346562 NANOGNBQ7Z5D8 188 aa22.52■■□□□ 1.2
NPAS3-201ENST00000346562 CDK15Q96Q40 435 aa22.52■■□□□ 1.2
NPAS3-201ENST00000346562 ACTL8Q9H568 366 aa22.52■■□□□ 1.2
NPAS3-201ENST00000346562 MED11Q9P086 117 aa22.52■■□□□ 1.2
NPAS3-201ENST00000346562 POFUT2Q9Y2G5 429 aa22.52■■□□□ 1.2
NPAS3-201ENST00000346562 UGT1A9O60656 530 aa22.52■■□□□ 1.2
NPAS3-201ENST00000346562 UGT1A6P19224 532 aa22.52■■□□□ 1.2
NPAS3-201ENST00000346562 UGT1A1P22309 533 aa22.52■■□□□ 1.2
NPAS3-201ENST00000346562 UGT1A4P22310 534 aa22.52■■□□□ 1.2
NPAS3-201ENST00000346562 LYSMD3Q7Z3D4 306 aa22.52■■□□□ 1.2
NPAS3-201ENST00000346562 AUTS2Q8WXX7 1259 aa22.52■■□□□ 1.2
NPAS3-201ENST00000346562 UGT1A7Q9HAW7 530 aa22.52■■□□□ 1.2
NPAS3-201ENST00000346562 UGT1A10Q9HAW8 530 aa22.52■■□□□ 1.2
NPAS3-201ENST00000346562 UGT1A8Q9HAW9 530 aa22.52■■□□□ 1.2
NPAS3-201ENST00000346562 TDP1Q9NUW8 608 aa22.52■■□□□ 1.2
NPAS3-201ENST00000346562 A8MUI8 341 aa22.51■■□□□ 1.19
NPAS3-201ENST00000346562 ENGP17813 658 aa22.51■■□□□ 1.19
NPAS3-201ENST00000346562 PTGIRP43119 386 aa22.51■■□□□ 1.19
NPAS3-201ENST00000346562 FRG2Q64ET8 278 aa22.51■■□□□ 1.19
NPAS3-201ENST00000346562 ZNF782Q6ZMW2 699 aaPredicted RBP22.51■■□□□ 1.19
NPAS3-201ENST00000346562 Q8N9G6 341 aaPredicted RBP22.51■■□□□ 1.19
NPAS3-201ENST00000346562 FRG2BQ96QU4 278 aa22.51■■□□□ 1.19
NPAS3-201ENST00000346562 CCSER2Q9H7U1 834 aa22.51■■□□□ 1.19
NPAS3-201ENST00000346562 SCML2Q9UQR0 700 aa22.51■■□□□ 1.19
NPAS3-201ENST00000346562 PPLO60437 1756 aa22.51■■□□□ 1.19
NPAS3-201ENST00000346562 NIPSNAP2O75323 286 aa22.51■■□□□ 1.19
NPAS3-201ENST00000346562 ADGRE1Q14246 886 aa22.51■■□□□ 1.19
NPAS3-201ENST00000346562 PMF1-BGLAPU3KQ54 211 aa22.51■■□□□ 1.19
NPAS3-201ENST00000346562 ATRNL1Q5VV63 1379 aa22.51■■□□□ 1.19
NPAS3-201ENST00000346562 TSPAN9O75954 239 aa22.51■■□□□ 1.19
NPAS3-201ENST00000346562 CCL14Q16627 93 aa22.51■■□□□ 1.19
NPAS3-201ENST00000346562 CLEC12AQ5QGZ9 265 aa22.51■■□□□ 1.19
NPAS3-201ENST00000346562 FBXL22Q6P050 247 aa22.51■■□□□ 1.19
NPAS3-201ENST00000346562 PAQR3Q6TCH7 311 aa22.51■■□□□ 1.19
NPAS3-201ENST00000346562 ENY2Q9NPA8 101 aa22.51■■□□□ 1.19
NPAS3-201ENST00000346562 PLIN4Q96Q06 1357 aa22.51■■□□□ 1.19
NPAS3-201ENST00000346562 ADAMTS3O15072 1205 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms