RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 HSP90AA5PQ58FG0 334 aa11.86□□□□□ -0.51
SGCA-202ENST00000344627 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.86□□□□□ -0.51
SGCA-202ENST00000344627 PRAMEF13Q5VWM6 474 aa11.86□□□□□ -0.51
SGCA-202ENST00000344627 ARMC3Q5W041 872 aa11.86□□□□□ -0.51
SGCA-202ENST00000344627 PRMT9Q6P2P2 845 aa11.86□□□□□ -0.51
SGCA-202ENST00000344627 PPP1R32Q7Z5V6 425 aa11.86□□□□□ -0.51
SGCA-202ENST00000344627 ADCK2Q7Z695 626 aa11.86□□□□□ -0.51
SGCA-202ENST00000344627 TMEM151BQ8IW70 566 aa11.86□□□□□ -0.51
SGCA-202ENST00000344627 REXO1L1PQ8IX06 675 aa11.86□□□□□ -0.51
SGCA-202ENST00000344627 PPIL6Q8IXY8 311 aa11.86□□□□□ -0.51
SGCA-202ENST00000344627 PRSS58Q8IYP2 241 aa11.86□□□□□ -0.51
SGCA-202ENST00000344627 OR4N4Q8N0Y3 316 aa11.86□□□□□ -0.51
SGCA-202ENST00000344627 CISD2Q8N5K1 135 aaKnown RBP11.86□□□□□ -0.51
SGCA-202ENST00000344627 PPFIBP2Q8ND30 876 aa11.86□□□□□ -0.51
SGCA-202ENST00000344627 OR2A1Q8NGT9 310 aa11.86□□□□□ -0.51
SGCA-202ENST00000344627 HMGCLL1Q8TB92 370 aa11.86□□□□□ -0.51
SGCA-202ENST00000344627 INPP5DQ92835 1189 aa11.86□□□□□ -0.51
SGCA-202ENST00000344627 CABS1Q96KC9 395 aa11.86□□□□□ -0.51
SGCA-202ENST00000344627 LMF1Q96S06 567 aa11.86□□□□□ -0.51
SGCA-202ENST00000344627 PKP4Q99569 1192 aa11.86□□□□□ -0.51
SGCA-202ENST00000344627 SLC30A3Q99726 388 aa11.86□□□□□ -0.51
SGCA-202ENST00000344627 ZFYVE21Q9BQ24 234 aa11.86□□□□□ -0.51
SGCA-202ENST00000344627 RUBCNLQ9H714 662 aa11.86□□□□□ -0.51
SGCA-202ENST00000344627 IARS2Q9NSE4 1012 aaKnown RBP11.86□□□□□ -0.51
SGCA-202ENST00000344627 ASF1BQ9NVP2 202 aa11.86□□□□□ -0.51
SGCA-202ENST00000344627 UTP6Q9NYH9 597 aaKnown RBP11.86□□□□□ -0.51
SGCA-202ENST00000344627 FBXL4Q9UKA2 621 aa11.86□□□□□ -0.51
SGCA-202ENST00000344627 KLK4Q9Y5K2 254 aa11.86□□□□□ -0.51
SGCA-202ENST00000344627 PCSK5Q92824 1860 aa11.86□□□□□ -0.51
SGCA-202ENST00000344627 USP9XQ93008 2570 aaPredicted RBP11.86□□□□□ -0.51
SGCA-202ENST00000344627 FITM1A5D6W6 292 aa11.85□□□□□ -0.51
SGCA-202ENST00000344627 PRPF4O43172 522 aaKnown RBP eCLIP11.85□□□□□ -0.51
SGCA-202ENST00000344627 ZBTB14O43829 449 aa11.85□□□□□ -0.51
SGCA-202ENST00000344627 NRP2O60462 931 aa11.85□□□□□ -0.51
SGCA-202ENST00000344627 ALOX12BO75342 701 aa11.85□□□□□ -0.51
SGCA-202ENST00000344627 VPS26AO75436 327 aa11.85□□□□□ -0.51
SGCA-202ENST00000344627 PSIP1O75475 530 aaKnown RBP11.85□□□□□ -0.51
SGCA-202ENST00000344627 CCNDBP1O95273 360 aa11.85□□□□□ -0.51
SGCA-202ENST00000344627 MYBL2P10244 700 aa11.85□□□□□ -0.51
SGCA-202ENST00000344627 EDN3P14138 238 aa11.85□□□□□ -0.51
SGCA-202ENST00000344627 HSD17B2P37059 387 aa11.85□□□□□ -0.51
SGCA-202ENST00000344627 SLC1A2P43004 574 aa11.85□□□□□ -0.51
SGCA-202ENST00000344627 GLRBP48167 497 aa11.85□□□□□ -0.51
SGCA-202ENST00000344627 FNTAP49354 379 aa11.85□□□□□ -0.51
SGCA-202ENST00000344627 CLCN7P51798 805 aa11.85□□□□□ -0.51
SGCA-202ENST00000344627 EMP3P54852 163 aa11.85□□□□□ -0.51
SGCA-202ENST00000344627 MPP1Q00013 466 aa11.85□□□□□ -0.51
SGCA-202ENST00000344627 OCA2Q04671 838 aa11.85□□□□□ -0.51
SGCA-202ENST00000344627 GBX1Q14549 363 aa11.85□□□□□ -0.51
SGCA-202ENST00000344627 TLR1Q15399 786 aa11.85□□□□□ -0.51
SGCA-202ENST00000344627 INAQ16352 499 aa11.85□□□□□ -0.51
SGCA-202ENST00000344627 RBBP7Q16576 425 aa11.85□□□□□ -0.51
SGCA-202ENST00000344627 NKG7Q16617 165 aa11.85□□□□□ -0.51
SGCA-202ENST00000344627 COX15Q7KZN9 410 aa11.85□□□□□ -0.51
SGCA-202ENST00000344627 SPNS2Q8IVW8 549 aa11.85□□□□□ -0.51
SGCA-202ENST00000344627 DTWD1Q8N5C7 304 aa11.85□□□□□ -0.51
SGCA-202ENST00000344627 NAT8LQ8N9F0 302 aa11.85□□□□□ -0.51
SGCA-202ENST00000344627 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.85□□□□□ -0.51
SGCA-202ENST00000344627 ACTRT1Q8TDG2 376 aa11.85□□□□□ -0.51
SGCA-202ENST00000344627 RERGQ96A58 199 aaPredicted RBP11.85□□□□□ -0.51
SGCA-202ENST00000344627 ZNF285Q96NJ3 590 aa11.85□□□□□ -0.51
SGCA-202ENST00000344627 GPR21Q99679 349 aa11.85□□□□□ -0.51
SGCA-202ENST00000344627 CRB3Q9BUF7 120 aa11.85□□□□□ -0.51
SGCA-202ENST00000344627 LHPPQ9H008 270 aa11.85□□□□□ -0.51
SGCA-202ENST00000344627 ZNF304Q9HCX3 659 aa11.85□□□□□ -0.51
SGCA-202ENST00000344627 SLC6A20Q9NP91 592 aa11.85□□□□□ -0.51
SGCA-202ENST00000344627 CTSFQ9UBX1 484 aa11.85□□□□□ -0.51
SGCA-202ENST00000344627 TAC3Q9UHF0 121 aa11.85□□□□□ -0.51
SGCA-202ENST00000344627 ERRFI1Q9UJM3 462 aaPredicted RBP11.85□□□□□ -0.51
SGCA-202ENST00000344627 FBXO5Q9UKT4 447 aa11.85□□□□□ -0.51
SGCA-202ENST00000344627 SHANK1Q9Y566 2161 aa11.84□□□□□ -0.51
SGCA-202ENST00000344627 ZCWPW2A0A1B0GU75 182 aa11.84□□□□□ -0.51
SGCA-202ENST00000344627 A0A1B0GUH1 482 aa11.84□□□□□ -0.51
SGCA-202ENST00000344627 H0YGG7 62 aa11.84□□□□□ -0.51
SGCA-202ENST00000344627 MYO1CO00159 1063 aa11.84□□□□□ -0.51
SGCA-202ENST00000344627 SMAPO00193 183 aa11.84□□□□□ -0.51
SGCA-202ENST00000344627 HAUS5O94927 633 aa11.84□□□□□ -0.51
SGCA-202ENST00000344627 SLC16A8O95907 504 aa11.84□□□□□ -0.51
SGCA-202ENST00000344627 FBLP22087 321 aaKnown RBP11.84□□□□□ -0.51
SGCA-202ENST00000344627 ARF3P61204 181 aaPredicted RBP11.84□□□□□ -0.51
SGCA-202ENST00000344627 PTK6Q13882 451 aa11.84□□□□□ -0.51
SGCA-202ENST00000344627 ARHGAP19Q14CB8 494 aa11.84□□□□□ -0.51
SGCA-202ENST00000344627 MUM1Q2TAK8 710 aa11.84□□□□□ -0.51
SGCA-202ENST00000344627 TUBB8Q3ZCM7 444 aa11.84□□□□□ -0.51
SGCA-202ENST00000344627 PRR30Q53SZ7 412 aaPredicted RBP11.84□□□□□ -0.51
SGCA-202ENST00000344627 FBXO42Q6P3S6 717 aa11.84□□□□□ -0.51
SGCA-202ENST00000344627 ZNF549Q6P9A3 640 aa11.84□□□□□ -0.51
SGCA-202ENST00000344627 NEK10Q6ZWH5 1172 aa11.84□□□□□ -0.51
SGCA-202ENST00000344627 UBE2R2Q712K3 238 aaPredicted RBP11.84□□□□□ -0.51
SGCA-202ENST00000344627 RNF44Q7L0R7 432 aa11.84□□□□□ -0.51
SGCA-202ENST00000344627 TICAM1Q8IUC6 712 aa11.84□□□□□ -0.51
SGCA-202ENST00000344627 PARP9Q8IXQ6 854 aa11.84□□□□□ -0.51
SGCA-202ENST00000344627 PALM2Q8IXS6 379 aa11.84□□□□□ -0.51
SGCA-202ENST00000344627 CPNE9Q8IYJ1 553 aa11.84□□□□□ -0.51
SGCA-202ENST00000344627 GABPB2Q8TAK5 448 aaPredicted RBP11.84□□□□□ -0.51
SGCA-202ENST00000344627 MIEF2Q96C03 454 aa11.84□□□□□ -0.51
SGCA-202ENST00000344627 MVB12AQ96EY5 273 aa11.84□□□□□ -0.51
SGCA-202ENST00000344627 SIGLEC10Q96LC7 697 aa11.84□□□□□ -0.51
SGCA-202ENST00000344627 PLCD4Q9BRC7 762 aa11.84□□□□□ -0.51
SGCA-202ENST00000344627 FAM167BQ9BTA0 163 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms