RNA–Protein interactions for RNA: ENST00000344376.9

ATG4B-201, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-201ENST00000344376 DNAJB5O75953 348 aa15.37■□□□□ 0.05
ATG4B-201ENST00000344376 IGHEP01854 428 aa15.37■□□□□ 0.05
ATG4B-201ENST00000344376 SPTBP11277 2137 aa15.37■□□□□ 0.05
ATG4B-201ENST00000344376 EZRP15311 586 aaKnown RBP15.37■□□□□ 0.05
ATG4B-201ENST00000344376 FDXRP22570 491 aa15.37■□□□□ 0.05
ATG4B-201ENST00000344376 IMPA1P29218 277 aa15.37■□□□□ 0.05
ATG4B-201ENST00000344376 TIAL1Q01085 375 aaKnown RBP eCLIP15.37■□□□□ 0.054e-6■■□□□ 12.4
ATG4B-201ENST00000344376 ILF2Q12905 390 aaKnown RBP15.37■□□□□ 0.05
ATG4B-201ENST00000344376 CHAF1BQ13112 559 aa15.37■□□□□ 0.05
ATG4B-201ENST00000344376 FASTKD3Q14CZ7 662 aaKnown RBP15.37■□□□□ 0.05
ATG4B-201ENST00000344376 FRMPD2BQ6IN97 320 aa15.37■□□□□ 0.05
ATG4B-201ENST00000344376 MRPL14Q6P1L8 145 aaKnown RBP15.37■□□□□ 0.05
ATG4B-201ENST00000344376 MED25Q71SY5 747 aa15.37■□□□□ 0.05
ATG4B-201ENST00000344376 SLC26A11Q86WA9 606 aa15.37■□□□□ 0.05
ATG4B-201ENST00000344376 PAQR7Q86WK9 346 aa15.37■□□□□ 0.05
ATG4B-201ENST00000344376 TMEM102Q8N9M5 508 aaPredicted RBP15.37■□□□□ 0.05
ATG4B-201ENST00000344376 PYROXD1Q8WU10 500 aa15.37■□□□□ 0.05
ATG4B-201ENST00000344376 RERGQ96A58 199 aaPredicted RBP15.37■□□□□ 0.05
ATG4B-201ENST00000344376 TRIM55Q9BYV6 548 aa15.37■□□□□ 0.05
ATG4B-201ENST00000344376 RAB17Q9H0T7 212 aa15.37■□□□□ 0.05
ATG4B-201ENST00000344376 BAHCC1Q9P281 2608 aa15.37■□□□□ 0.05
ATG4B-201ENST00000344376 EIF3HO15372 352 aaKnown RBP eCLIP15.36■□□□□ 0.05
ATG4B-201ENST00000344376 ALBP02768 609 aa15.36■□□□□ 0.05
ATG4B-201ENST00000344376 HRH2P25021 359 aa15.36■□□□□ 0.05
ATG4B-201ENST00000344376 CCL11P51671 97 aa15.36■□□□□ 0.05
ATG4B-201ENST00000344376 YBX1P67809 324 aaKnown RBP15.36■□□□□ 0.05
ATG4B-201ENST00000344376 CKAP4Q07065 602 aaKnown RBP15.36■□□□□ 0.05
ATG4B-201ENST00000344376 ATP1A4Q13733 1029 aa15.36■□□□□ 0.05
ATG4B-201ENST00000344376 MUM1Q2TAK8 710 aa15.36■□□□□ 0.05
ATG4B-201ENST00000344376 PRAMEF13Q5VWM6 474 aa15.36■□□□□ 0.05
ATG4B-201ENST00000344376 ASB18Q6ZVZ8 466 aa15.36■□□□□ 0.05
ATG4B-201ENST00000344376 STRA8Q7Z7C7 330 aa15.36■□□□□ 0.05
ATG4B-201ENST00000344376 MRGPREQ86SM8 312 aa15.36■□□□□ 0.05
ATG4B-201ENST00000344376 SPNS2Q8IVW8 549 aa15.36■□□□□ 0.05
ATG4B-201ENST00000344376 PTERQ96BW5 349 aa15.36■□□□□ 0.05
ATG4B-201ENST00000344376 CABS1Q96KC9 395 aa15.36■□□□□ 0.05
ATG4B-201ENST00000344376 SLC25A23Q9BV35 468 aa15.36■□□□□ 0.05
ATG4B-201ENST00000344376 TRIM54Q9BYV2 358 aa15.36■□□□□ 0.05
ATG4B-201ENST00000344376 WDR54Q9H977 334 aa15.36■□□□□ 0.05
ATG4B-201ENST00000344376 STOX2Q9P2F5 926 aaPredicted RBP15.36■□□□□ 0.05
ATG4B-201ENST00000344376 NXT1Q9UKK6 140 aaKnown RBP15.36■□□□□ 0.05
ATG4B-201ENST00000344376 ADAMTS6Q9UKP5 1117 aa15.36■□□□□ 0.05
ATG4B-201ENST00000344376 PDE10AQ9Y233 779 aa15.36■□□□□ 0.05
ATG4B-201ENST00000344376 BOD1L1Q8NFC6 3051 aa15.36■□□□□ 0.05
ATG4B-201ENST00000344376 SNRNP200O75643 2136 aaKnown RBP15.36■□□□□ 0.05
ATG4B-201ENST00000344376 LOC105369274A0A096LPK9 316 aa15.36■□□□□ 0.05
ATG4B-201ENST00000344376 LOC102723532A0A0G2JNH3 316 aa15.36■□□□□ 0.05
ATG4B-201ENST00000344376 H0YGG7 62 aa15.36■□□□□ 0.05
ATG4B-201ENST00000344376 TXNDC9O14530 226 aa15.36■□□□□ 0.05
ATG4B-201ENST00000344376 NRP2O60462 931 aa15.36■□□□□ 0.05
ATG4B-201ENST00000344376 CCND1P24385 295 aa15.36■□□□□ 0.05
ATG4B-201ENST00000344376 PGDP52209 483 aa15.36■□□□□ 0.05
ATG4B-201ENST00000344376 ARF3P61204 181 aaPredicted RBP15.36■□□□□ 0.05
ATG4B-201ENST00000344376 TBPL1P62380 186 aa15.36■□□□□ 0.05
ATG4B-201ENST00000344376 CAV1Q03135 178 aa15.36■□□□□ 0.05
ATG4B-201ENST00000344376 CBLBQ13191 982 aa15.36■□□□□ 0.05
ATG4B-201ENST00000344376 ZNF425Q6IV72 752 aa15.36■□□□□ 0.05
ATG4B-201ENST00000344376 PRMT9Q6P2P2 845 aa15.36■□□□□ 0.05
ATG4B-201ENST00000344376 FBXO42Q6P3S6 717 aa15.36■□□□□ 0.05
ATG4B-201ENST00000344376 OVCH1Q7RTY7 1134 aa15.36■□□□□ 0.05
ATG4B-201ENST00000344376 LRRC56Q8IYG6 542 aaPredicted RBP15.36■□□□□ 0.05
ATG4B-201ENST00000344376 OR4N4Q8N0Y3 316 aa15.36■□□□□ 0.05
ATG4B-201ENST00000344376 CSNK1A1LQ8N752 337 aa15.36■□□□□ 0.05
ATG4B-201ENST00000344376 CDKL2Q92772 493 aa15.36■□□□□ 0.05
ATG4B-201ENST00000344376 FER1L6-AS2Q96M78 137 aa15.36■□□□□ 0.05
ATG4B-201ENST00000344376 SAYSD1Q9NPB0 183 aa15.36■□□□□ 0.05
ATG4B-201ENST00000344376 MOCS1Q9NZB8 636 aa15.36■□□□□ 0.05
ATG4B-201ENST00000344376 PCDHGA9Q9Y5G4 932 aaKnown RBP15.36■□□□□ 0.05
ATG4B-201ENST00000344376 GCN1Q92616 2671 aaKnown RBP15.35■□□□□ 0.05
ATG4B-201ENST00000344376 IGKV1-8A0A0C4DH67 115 aa15.35■□□□□ 0.05
ATG4B-201ENST00000344376 PRPF4O43172 522 aaKnown RBP eCLIP15.35■□□□□ 0.052e-6■■■□□ 18.7
ATG4B-201ENST00000344376 ONECUT2O95948 504 aa15.35■□□□□ 0.05
ATG4B-201ENST00000344376 SAT1P21673 171 aa15.35■□□□□ 0.05
ATG4B-201ENST00000344376 EMP3P54852 163 aa15.35■□□□□ 0.05
ATG4B-201ENST00000344376 AP1S2P56377 157 aa15.35■□□□□ 0.05
ATG4B-201ENST00000344376 RELAQ04206 551 aa15.35■□□□□ 0.05
ATG4B-201ENST00000344376 KLRB1Q12918 225 aa15.35■□□□□ 0.05
ATG4B-201ENST00000344376 DUPD1Q68J44 220 aa15.35■□□□□ 0.05
ATG4B-201ENST00000344376 AGTRAPQ6RW13 159 aa15.35■□□□□ 0.05
ATG4B-201ENST00000344376 CAPN12Q6ZSI9 719 aa15.35■□□□□ 0.05
ATG4B-201ENST00000344376 METTL27Q8N6F8 245 aaPredicted RBP15.35■□□□□ 0.05
ATG4B-201ENST00000344376 TEX19Q8NA77 164 aa15.35■□□□□ 0.05
ATG4B-201ENST00000344376 COL26A1Q96A83 441 aa15.35■□□□□ 0.05
ATG4B-201ENST00000344376 VPS39Q96JC1 886 aa15.35■□□□□ 0.05
ATG4B-201ENST00000344376 OLFM1Q99784 485 aa15.35■□□□□ 0.05
ATG4B-201ENST00000344376 SLC26A1Q9H2B4 701 aa15.35■□□□□ 0.05
ATG4B-201ENST00000344376 SLC22A11Q9NSA0 550 aa15.35■□□□□ 0.05
ATG4B-201ENST00000344376 ARL15Q9NXU5 204 aa15.35■□□□□ 0.05
ATG4B-201ENST00000344376 TXNDC16Q9P2K2 825 aa15.35■□□□□ 0.05
ATG4B-201ENST00000344376 CDC14AQ9UNH5 594 aa15.35■□□□□ 0.05
ATG4B-201ENST00000344376 FAM95CA0A1B0GW59 222 aa15.34■□□□□ 0.05
ATG4B-201ENST00000344376 CNOT3O75175 753 aaKnown RBP15.34■□□□□ 0.05
ATG4B-201ENST00000344376 TSPAN12O95859 305 aa15.34■□□□□ 0.05
ATG4B-201ENST00000344376 ENO2P09104 434 aaPredicted RBP15.34■□□□□ 0.05
ATG4B-201ENST00000344376 NR1D1P20393 614 aa15.34■□□□□ 0.05
ATG4B-201ENST00000344376 ITGAXP20702 1163 aa15.34■□□□□ 0.05
ATG4B-201ENST00000344376 OR1D4P47884 311 aa15.34■□□□□ 0.05
ATG4B-201ENST00000344376 PRTGQ2VWP7 1150 aa15.34■□□□□ 0.05
ATG4B-201ENST00000344376 ZC3HC1Q86WB0 502 aaKnown RBP15.34■□□□□ 0.05
ATG4B-201ENST00000344376 C17orf64Q86WR6 236 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms