RNA–Protein interactions for RNA: ENST00000343550.9

USF2-202, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 1 (best) BASIC

Gene USF2, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-202ENST00000343550 USP10Q14694 798 aaKnown RBP17.29■□□□□ 0.36
USF2-202ENST00000343550 EFTUD2Q15029 972 aaKnown RBP eCLIP17.29■□□□□ 0.363e-8■■■■□ 19.5
USF2-202ENST00000343550 PRAMEF17Q5VTA0 474 aa17.29■□□□□ 0.36
USF2-202ENST00000343550 ASB18Q6ZVZ8 466 aa17.29■□□□□ 0.36
USF2-202ENST00000343550 TMEM126BQ8IUX1 230 aa17.29■□□□□ 0.36
USF2-202ENST00000343550 APLFQ8IW19 511 aaPredicted RBP17.29■□□□□ 0.36
USF2-202ENST00000343550 SYTL1Q8IYJ3 562 aa17.29■□□□□ 0.36
USF2-202ENST00000343550 TEX19Q8NA77 164 aa17.29■□□□□ 0.36
USF2-202ENST00000343550 ANKRD49Q8WVL7 239 aa17.29■□□□□ 0.36
USF2-202ENST00000343550 ANKRD7Q92527 254 aa17.29■□□□□ 0.36
USF2-202ENST00000343550 ACAT2Q9BWD1 397 aa17.29■□□□□ 0.36
USF2-202ENST00000343550 FUT8Q9BYC5 575 aa17.29■□□□□ 0.36
USF2-202ENST00000343550 GPAMQ9HCL2 828 aa17.29■□□□□ 0.36
USF2-202ENST00000343550 INTS7Q9NVH2 962 aaKnown RBP17.29■□□□□ 0.36
USF2-202ENST00000343550 IKZF3Q9UKT9 509 aa17.29■□□□□ 0.36
USF2-202ENST00000343550 KLK4Q9Y5K2 254 aa17.29■□□□□ 0.36
USF2-202ENST00000343550 H3BMH7 237 aa17.28■□□□□ 0.36
USF2-202ENST00000343550 SCRG1O75711 98 aa17.28■□□□□ 0.36
USF2-202ENST00000343550 WISP3O95389 354 aaPredicted RBP17.28■□□□□ 0.36
USF2-202ENST00000343550 HIST1H2AGP0C0S8 130 aaPredicted RBP17.28■□□□□ 0.36
USF2-202ENST00000343550 HIST1H2ADP20671 130 aa17.28■□□□□ 0.36
USF2-202ENST00000343550 RPA3P35244 121 aaPredicted RBP17.28■□□□□ 0.36
USF2-202ENST00000343550 RPS15P62841 145 aaKnown RBP17.28■□□□□ 0.36
USF2-202ENST00000343550 SLC38A9Q8NBW4 561 aa17.28■□□□□ 0.36
USF2-202ENST00000343550 TSPAN17Q96FV3 270 aa17.28■□□□□ 0.36
USF2-202ENST00000343550 HIST1H2AHQ96KK5 128 aa17.28■□□□□ 0.36
USF2-202ENST00000343550 CYTH2Q99418 400 aa17.28■□□□□ 0.36
USF2-202ENST00000343550 HIST1H2AJQ99878 128 aa17.28■□□□□ 0.36
USF2-202ENST00000343550 H2AFJQ9BTM1 129 aa17.28■□□□□ 0.36
USF2-202ENST00000343550 STOX2Q9P2F5 926 aaPredicted RBP17.28■□□□□ 0.36
USF2-202ENST00000343550 ACSL3O95573 720 aa17.27■□□□□ 0.36
USF2-202ENST00000343550 STMN1P16949 149 aa17.27■□□□□ 0.36
USF2-202ENST00000343550 CMPK1P30085 196 aa17.27■□□□□ 0.36
USF2-202ENST00000343550 ITGA1P56199 1179 aa17.27■□□□□ 0.36
USF2-202ENST00000343550 RPS18P62269 152 aaKnown RBP17.27■□□□□ 0.36
USF2-202ENST00000343550 PRDX1Q06830 199 aaKnown RBP17.27■□□□□ 0.36
USF2-202ENST00000343550 TSTA3Q13630 321 aaPredicted RBP17.27■□□□□ 0.36
USF2-202ENST00000343550 UBAP2LQ14157 1087 aaKnown RBP17.27■□□□□ 0.36
USF2-202ENST00000343550 UGT8Q16880 541 aa17.27■□□□□ 0.36
USF2-202ENST00000343550 SBSNQ6UWP8 590 aa17.27■□□□□ 0.36
USF2-202ENST00000343550 ZNF517Q6ZMY9 492 aaPredicted RBP17.27■□□□□ 0.36
USF2-202ENST00000343550 MBOAT1Q6ZNC8 495 aa17.27■□□□□ 0.36
USF2-202ENST00000343550 THAP4Q8WY91 577 aa17.27■□□□□ 0.36
USF2-202ENST00000343550 N4BP2L2Q92802 583 aaPredicted RBP17.27■□□□□ 0.36
USF2-202ENST00000343550 MR1Q95460 341 aa17.27■□□□□ 0.36
USF2-202ENST00000343550 TRIM54Q9BYV2 358 aa17.27■□□□□ 0.36
USF2-202ENST00000343550 SPRTNQ9H040 489 aaPredicted RBP17.27■□□□□ 0.36
USF2-202ENST00000343550 ACSS3Q9H6R3 686 aa17.27■□□□□ 0.36
USF2-202ENST00000343550 PLCL2Q9UPR0 1127 aa17.27■□□□□ 0.36
USF2-202ENST00000343550 PLAAQ9Y263 795 aa17.27■□□□□ 0.36
USF2-202ENST00000343550 FARSAQ9Y285 508 aaKnown RBP17.27■□□□□ 0.36
USF2-202ENST00000343550 SPTBP11277 2137 aa17.27■□□□□ 0.36
USF2-202ENST00000343550 CDC7O00311 574 aa17.26■□□□□ 0.35
USF2-202ENST00000343550 DNAJB5O75953 348 aa17.26■□□□□ 0.35
USF2-202ENST00000343550 KLK3P07288 261 aaPredicted RBP17.26■□□□□ 0.35
USF2-202ENST00000343550 CTSBP07858 339 aa17.26■□□□□ 0.35
USF2-202ENST00000343550 GPS2Q13227 327 aa17.26■□□□□ 0.35
USF2-202ENST00000343550 SLMAPQ14BN4 828 aa17.26■□□□□ 0.35
USF2-202ENST00000343550 ZXDCQ2QGD7 858 aaPredicted RBP17.26■□□□□ 0.35
USF2-202ENST00000343550 DEFB110Q30KQ9 67 aa17.26■□□□□ 0.35
USF2-202ENST00000343550 ICE2Q659A1 982 aa17.26■□□□□ 0.35
USF2-202ENST00000343550 AGTRAPQ6RW13 159 aa17.26■□□□□ 0.35
USF2-202ENST00000343550 SYVN1Q86TM6 617 aa17.26■□□□□ 0.35
USF2-202ENST00000343550 MCATQ8IVS2 390 aaKnown RBP17.26■□□□□ 0.35
USF2-202ENST00000343550 MRRFQ96E11 262 aaKnown RBP17.26■□□□□ 0.35
USF2-202ENST00000343550 DPH7Q9BTV6 452 aa17.26■□□□□ 0.35
USF2-202ENST00000343550 TRIM55Q9BYV6 548 aa17.26■□□□□ 0.35
USF2-202ENST00000343550 ARL15Q9NXU5 204 aa17.26■□□□□ 0.35
USF2-202ENST00000343550 EURLQ9NYK6 297 aa17.26■□□□□ 0.35
USF2-202ENST00000343550 TAC3Q9UHF0 121 aa17.26■□□□□ 0.35
USF2-202ENST00000343550 NOVA2Q9UNW9 492 aaKnown RBP17.26■□□□□ 0.35
USF2-202ENST00000343550 IGKV1-8A0A0C4DH67 115 aa17.26■□□□□ 0.35
USF2-202ENST00000343550 ESPNB1AK53 854 aa17.26■□□□□ 0.35
USF2-202ENST00000343550 E7EQ34 232 aa17.26■□□□□ 0.35
USF2-202ENST00000343550 PHGDHO43175 533 aaKnown RBP17.26■□□□□ 0.35
USF2-202ENST00000343550 ZNF749O43361 778 aa17.26■□□□□ 0.35
USF2-202ENST00000343550 CTSVO60911 334 aa17.26■□□□□ 0.35
USF2-202ENST00000343550 OR2B3O76000 313 aa17.26■□□□□ 0.35
USF2-202ENST00000343550 ENO2P09104 434 aaPredicted RBP17.26■□□□□ 0.35
USF2-202ENST00000343550 AP1S2P56377 157 aa17.26■□□□□ 0.35
USF2-202ENST00000343550 RAB10P61026 200 aa17.26■□□□□ 0.35
USF2-202ENST00000343550 SRSF1Q07955 248 aaKnown RBP eCLIP17.26■□□□□ 0.35
USF2-202ENST00000343550 ZKSCAN8Q15776 578 aaPredicted RBP17.26■□□□□ 0.35
USF2-202ENST00000343550 ZC3H12BQ5HYM0 836 aaKnown RBP17.26■□□□□ 0.35
USF2-202ENST00000343550 FBXO42Q6P3S6 717 aa17.26■□□□□ 0.35
USF2-202ENST00000343550 GPR135Q8IZ08 494 aa17.26■□□□□ 0.35
USF2-202ENST00000343550 UBXN10Q96LJ8 280 aa17.26■□□□□ 0.35
USF2-202ENST00000343550 LRFN5Q96NI6 719 aa17.26■□□□□ 0.35
USF2-202ENST00000343550 DERL2Q9GZP9 239 aa17.26■□□□□ 0.35
USF2-202ENST00000343550 ATG10Q9H0Y0 220 aa17.26■□□□□ 0.35
USF2-202ENST00000343550 SLC6A20Q9NP91 592 aa17.26■□□□□ 0.35
USF2-202ENST00000343550 MRPS30Q9NP92 439 aaKnown RBP17.26■□□□□ 0.35
USF2-202ENST00000343550 ABCF3Q9NUQ8 709 aa17.26■□□□□ 0.35
USF2-202ENST00000343550 ANKRD12Q6UB98 2062 aa17.26■□□□□ 0.35
USF2-202ENST00000343550 HMX2A2RU54 273 aa17.25■□□□□ 0.35
USF2-202ENST00000343550 OR2A25A4D2G3 310 aa17.25■□□□□ 0.35
USF2-202ENST00000343550 PDGFAP04085 211 aa17.25■□□□□ 0.35
USF2-202ENST00000343550 FAM153BP0C7A2 387 aa17.25■□□□□ 0.35
USF2-202ENST00000343550 CCDC166P0CW27 439 aa17.25■□□□□ 0.35
USF2-202ENST00000343550 NAE1Q13564 534 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms