RNA–Protein interactions for RNA: ENST00000343508.7

CSMD3-203, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 13,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-203ENST00000343508 MAELQ96JY0 434 aaKnown RBP4.66□□□□□ -1.66
CSMD3-203ENST00000343508 TTYH2Q9BSA4 534 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 ABCG8Q9H221 673 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 FBRSL1Q9HCM7 1045 aaKnown RBP4.66□□□□□ -1.66
CSMD3-203ENST00000343508 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.66□□□□□ -1.66
CSMD3-203ENST00000343508 COPZ2Q9P299 210 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 STUB1Q9UNE7 303 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 ABCG2Q9UNQ0 655 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 ZCWPW2A0A1B0GU75 182 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 ARL5CA6NH57 179 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 ITGAMP11215 1152 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 EIF2DP41214 584 aaKnown RBP4.66□□□□□ -1.66
CSMD3-203ENST00000343508 SH3BP2P78314 561 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 RPP38P78345 283 aaKnown RBP4.66□□□□□ -1.66
CSMD3-203ENST00000343508 SLC10A7Q0GE19 358 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 DESI1Q6ICB0 168 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 CAPN13Q6MZZ7 669 aaPredicted RBP4.66□□□□□ -1.66
CSMD3-203ENST00000343508 OR13C4Q8NGS5 318 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 ZBED6CLQ96FA7 236 aaPredicted RBP4.66□□□□□ -1.66
CSMD3-203ENST00000343508 MNTQ99583 582 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 C1QTNF1Q9BXJ1 281 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 ASPNQ9BXN1 380 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 TTYH1Q9H313 450 aaPredicted RBP4.66□□□□□ -1.66
CSMD3-203ENST00000343508 SOX17Q9H6I2 414 aaPredicted RBP4.66□□□□□ -1.66
CSMD3-203ENST00000343508 SYNDIG1Q9H7V2 258 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 PCDHGA8Q9Y5G5 932 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 OR14I1A6ND48 311 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 PIRO00625 290 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 SEC14L2O76054 403 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 URODP06132 367 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 ALDH3B2P48448 385 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 MAZP56270 477 aaKnown RBP4.66□□□□□ -1.66
CSMD3-203ENST00000343508 OLIG2Q13516 323 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 GRB7Q14451 532 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 ANKDD1AQ495B1 522 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 CRTC2Q53ET0 693 aaPredicted RBP4.66□□□□□ -1.66
CSMD3-203ENST00000343508 FAAH2Q6GMR7 532 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.66□□□□□ -1.66
CSMD3-203ENST00000343508 NOXA1Q86UR1 476 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 GPC2Q8N158 579 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 HAVCR1Q96D42 359 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 ALPK1Q96QP1 1244 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 MGLLQ99685 303 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 DOHHQ9BU89 302 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 RDH8Q9NYR8 311 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 ATPIF1Q9UII2 106 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 RBBP6Q7Z6E9 1792 aaKnown RBP4.66□□□□□ -1.66
CSMD3-203ENST00000343508 PHIPQ8WWQ0 1821 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 MYBPHLA2RUH7 354 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 AGRPO00253 132 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 TARBP2Q15633 366 aaKnown RBP4.66□□□□□ -1.66
CSMD3-203ENST00000343508 TRAPPC5Q8IUR0 188 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 DENND6BQ8NEG7 585 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 C3orf14Q9HBI5 128 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 INTS7Q9NVH2 962 aaKnown RBP4.66□□□□□ -1.66
CSMD3-203ENST00000343508 TMEM248Q9NWD8 314 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 AGAP5A6NIR3 686 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 CLDN24A6NM45 220 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 TLR4O00206 839 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 CDRT1O95170 752 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 ITPKAP23677 461 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 LCN1P31025 176 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 TLX1P31314 330 aaPredicted RBP4.66□□□□□ -1.66
CSMD3-203ENST00000343508 TAS2R43P59537 309 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 NCS1P62166 190 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 SKP1P63208 163 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 RBBP4Q09028 425 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 SCAPQ12770 1279 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 TRAM1Q15629 374 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 OR4F3Q6IEY1 312 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 DPY19L2P1Q6NXN4 242 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 DHRS4L2Q6PKH6 230 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 OAFQ86UD1 273 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 LACC1Q8IV20 430 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 PHACTR4Q8IZ21 702 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 Q8N402 240 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 TOR1AIP2Q8NFQ8 470 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 TRPM4Q8TD43 1214 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 SOCS4Q8WXH5 440 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 MOCOSQ96EN8 888 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 MED30Q96HR3 178 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 FUBP3Q96I24 572 aaKnown RBP eCLIP4.66□□□□□ -1.66
CSMD3-203ENST00000343508 RETREG1Q9H6L5 497 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 SMURF1Q9HCE7 757 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 POLR3BQ9NW08 1133 aaPredicted RBP4.66□□□□□ -1.66
CSMD3-203ENST00000343508 KIAA0513O60268 411 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 RP2O75695 350 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 PRKAG1P54619 331 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 AP1S1P61966 158 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 C10orf62Q5T681 223 aaPredicted RBP4.66□□□□□ -1.66
CSMD3-203ENST00000343508 GDPGP1Q6ZNW5 385 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 NR4A3Q92570 626 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 ISL2Q96A47 359 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 TMEM125Q96AQ2 219 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 KLRG1Q96E93 195 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 PPP1R16AQ96I34 528 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 OR4K3Q96R72 315 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 MGME1Q9BQP7 344 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 NMUR1Q9HB89 426 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 ISM1B1AKI9 464 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms