RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 AHSA1O95433 338 aa17.24■□□□□ 0.35
SMAD4-201ENST00000342988 ZBTB48P10074 688 aaPredicted RBP17.24■□□□□ 0.35
SMAD4-201ENST00000342988 MSX1P28360 303 aa17.24■□□□□ 0.35
SMAD4-201ENST00000342988 SPAM1P38567 509 aa17.24■□□□□ 0.35
SMAD4-201ENST00000342988 MVKQ03426 396 aa17.24■□□□□ 0.35
SMAD4-201ENST00000342988 BST1Q10588 318 aa17.24■□□□□ 0.35
SMAD4-201ENST00000342988 C4orf19Q8IY42 314 aa17.24■□□□□ 0.35
SMAD4-201ENST00000342988 TP53TG5Q9Y2B4 290 aa17.24■□□□□ 0.35
SMAD4-201ENST00000342988 HOXD8P13378 290 aaPredicted RBP17.23■□□□□ 0.35
SMAD4-201ENST00000342988 REP15Q6BDI9 236 aa17.23■□□□□ 0.35
SMAD4-201ENST00000342988 ZNF558Q96NG5 402 aa17.23■□□□□ 0.35
SMAD4-201ENST00000342988 PAK1IP1Q9NWT1 392 aaPredicted RBP17.23■□□□□ 0.35
SMAD4-201ENST00000342988 PPP4R1LQ9P1A2 415 aa17.23■□□□□ 0.35
SMAD4-201ENST00000342988 ACTR3BQ9P1U1 418 aa17.23■□□□□ 0.35
SMAD4-201ENST00000342988 HCN2Q9UL51 889 aa17.23■□□□□ 0.35
SMAD4-201ENST00000342988 TESMINQ9Y4I5 508 aa17.23■□□□□ 0.35
SMAD4-201ENST00000342988 GLYATL1P3A0A0U1RQE8 302 aa17.23■□□□□ 0.35
SMAD4-201ENST00000342988 PSMD10O75832 226 aa17.23■□□□□ 0.35
SMAD4-201ENST00000342988 RHOP08100 348 aa17.23■□□□□ 0.35
SMAD4-201ENST00000342988 CAMLGP49069 296 aa17.23■□□□□ 0.35
SMAD4-201ENST00000342988 THBS3P49746 956 aa17.23■□□□□ 0.35
SMAD4-201ENST00000342988 ZNF136P52737 540 aa17.23■□□□□ 0.35
SMAD4-201ENST00000342988 ERVK-21P61565 698 aa17.23■□□□□ 0.35
SMAD4-201ENST00000342988 CBR4Q8N4T8 237 aa17.23■□□□□ 0.35
SMAD4-201ENST00000342988 CCDC71LQ8N9Z2 235 aa17.23■□□□□ 0.35
SMAD4-201ENST00000342988 TM6SF2Q9BZW4 377 aa17.23■□□□□ 0.35
SMAD4-201ENST00000342988 TMED5Q9Y3A6 229 aa17.23■□□□□ 0.35
SMAD4-201ENST00000342988 SERINC3Q13530 473 aa17.23■□□□□ 0.35
SMAD4-201ENST00000342988 CREG2Q8IUH2 290 aa17.23■□□□□ 0.35
SMAD4-201ENST00000342988 FEM1AQ9BSK4 669 aa17.23■□□□□ 0.35
SMAD4-201ENST00000342988 FAM122CQ6P4D5 195 aa17.23■□□□□ 0.35
SMAD4-201ENST00000342988 PIGBQ92521 554 aa17.23■□□□□ 0.35
SMAD4-201ENST00000342988 RRNAD1Q96FB5 475 aaKnown RBP17.23■□□□□ 0.35
SMAD4-201ENST00000342988 PCDHGA6Q9Y5G7 932 aa17.23■□□□□ 0.35
SMAD4-201ENST00000342988 RNF17Q9BXT8 1623 aaKnown RBP17.23■□□□□ 0.35
SMAD4-201ENST00000342988 GLRA2P23416 452 aa17.23■□□□□ 0.35
SMAD4-201ENST00000342988 DDR1Q08345 913 aa17.23■□□□□ 0.35
SMAD4-201ENST00000342988 MALLQ13021 153 aa17.23■□□□□ 0.35
SMAD4-201ENST00000342988 MELKQ14680 651 aa17.23■□□□□ 0.35
SMAD4-201ENST00000342988 PPP1R26Q5T8A7 1209 aaPredicted RBP17.23■□□□□ 0.35
SMAD4-201ENST00000342988 SV2AQ7L0J3 742 aa17.23■□□□□ 0.35
SMAD4-201ENST00000342988 UNC93AQ86WB7 457 aa17.23■□□□□ 0.35
SMAD4-201ENST00000342988 C19orf25Q9UFG5 118 aaPredicted RBP17.23■□□□□ 0.35
SMAD4-201ENST00000342988 E5RJQ4 531 aa17.23■□□□□ 0.35
SMAD4-201ENST00000342988 MT-ND2P03891 347 aa17.23■□□□□ 0.35
SMAD4-201ENST00000342988 ERVK-16P61578 105 aa17.23■□□□□ 0.35
SMAD4-201ENST00000342988 MFSD13AQ14CX5 517 aa17.23■□□□□ 0.35
SMAD4-201ENST00000342988 RASGRP3Q8IV61 690 aa17.23■□□□□ 0.35
SMAD4-201ENST00000342988 LRRC57Q8N9N7 239 aa17.23■□□□□ 0.35
SMAD4-201ENST00000342988 ERLEC1Q96DZ1 483 aa17.23■□□□□ 0.35
SMAD4-201ENST00000342988 WACQ9BTA9 647 aa17.23■□□□□ 0.35
SMAD4-201ENST00000342988 GRHPRQ9UBQ7 328 aa17.23■□□□□ 0.35
SMAD4-201ENST00000342988 NRCAMQ92823 1304 aa17.23■□□□□ 0.35
SMAD4-201ENST00000342988 PLATP00750 562 aa17.23■□□□□ 0.35
SMAD4-201ENST00000342988 ANXA8P13928 327 aa17.23■□□□□ 0.35
SMAD4-201ENST00000342988 TSPAN8P19075 237 aa17.23■□□□□ 0.35
SMAD4-201ENST00000342988 HTR7P34969 479 aa17.23■□□□□ 0.35
SMAD4-201ENST00000342988 THBS2P35442 1172 aa17.23■□□□□ 0.35
SMAD4-201ENST00000342988 VSX2P58304 361 aaPredicted RBP17.23■□□□□ 0.35
SMAD4-201ENST00000342988 GALK2Q01415 458 aa17.23■□□□□ 0.35
SMAD4-201ENST00000342988 LRP8Q14114 963 aa17.23■□□□□ 0.35
SMAD4-201ENST00000342988 SCIMPQ6UWF3 145 aa17.23■□□□□ 0.35
SMAD4-201ENST00000342988 SH3RF1Q7Z6J0 888 aa17.23■□□□□ 0.35
SMAD4-201ENST00000342988 CRAMP1Q96RY5 1269 aa17.23■□□□□ 0.35
SMAD4-201ENST00000342988 KCNIP1Q9NZI2 227 aa17.23■□□□□ 0.35
SMAD4-201ENST00000342988 SCN1AP35498 2009 aa17.22■□□□□ 0.35
SMAD4-201ENST00000342988 PAK4O96013 591 aaPredicted RBP17.22■□□□□ 0.35
SMAD4-201ENST00000342988 AMY2BP19961 511 aa17.22■□□□□ 0.35
SMAD4-201ENST00000342988 NCBP2P52298 156 aaKnown RBP eCLIP17.22■□□□□ 0.35
SMAD4-201ENST00000342988 LILRB2Q8N423 598 aa17.22■□□□□ 0.35
SMAD4-201ENST00000342988 PLA2G15Q8NCC3 412 aa17.22■□□□□ 0.35
SMAD4-201ENST00000342988 LPGAT1Q92604 370 aa17.22■□□□□ 0.35
SMAD4-201ENST00000342988 A6NHS1 94 aa17.22■□□□□ 0.35
SMAD4-201ENST00000342988 RPP40O75818 363 aaKnown RBP17.22■□□□□ 0.35
SMAD4-201ENST00000342988 CCNOP22674 350 aa17.22■□□□□ 0.35
SMAD4-201ENST00000342988 FXYD6P3P58550 94 aa17.22■□□□□ 0.35
SMAD4-201ENST00000342988 UBQLNLQ8IYU4 475 aa17.22■□□□□ 0.35
SMAD4-201ENST00000342988 TGM7Q96PF1 710 aa17.22■□□□□ 0.35
SMAD4-201ENST00000342988 GXYLT2A0PJZ3 443 aa17.22■□□□□ 0.35
SMAD4-201ENST00000342988 DLGAP1O14490 977 aa17.22■□□□□ 0.35
SMAD4-201ENST00000342988 ACTR1BP42025 376 aa17.22■□□□□ 0.35
SMAD4-201ENST00000342988 MLLT3P42568 568 aaPredicted RBP17.22■□□□□ 0.35
SMAD4-201ENST00000342988 TLE1Q04724 770 aa17.22■□□□□ 0.35
SMAD4-201ENST00000342988 CDK18Q07002 472 aa17.22■□□□□ 0.35
SMAD4-201ENST00000342988 SEMA5AQ13591 1074 aa17.22■□□□□ 0.35
SMAD4-201ENST00000342988 C4orf17Q53FE4 359 aa17.22■□□□□ 0.35
SMAD4-201ENST00000342988 SPIN4Q56A73 249 aa17.22■□□□□ 0.35
SMAD4-201ENST00000342988 NIPAL1Q6NVV3 410 aa17.22■□□□□ 0.35
SMAD4-201ENST00000342988 PDGFDQ9GZP0 370 aaPredicted RBP17.22■□□□□ 0.35
SMAD4-201ENST00000342988 DCSTAMPQ9H295 470 aa17.22■□□□□ 0.35
SMAD4-201ENST00000342988 MRPS17Q9Y2R5 130 aaKnown RBP17.22■□□□□ 0.35
SMAD4-201ENST00000342988 FABP6P51161 128 aa17.22■□□□□ 0.35
SMAD4-201ENST00000342988 SP3Q02447 781 aa17.22■□□□□ 0.35
SMAD4-201ENST00000342988 FADDQ13158 208 aa17.22■□□□□ 0.35
SMAD4-201ENST00000342988 SYT16Q17RD7 645 aa17.22■□□□□ 0.35
SMAD4-201ENST00000342988 LRRC38Q5VT99 294 aa17.22■□□□□ 0.35
SMAD4-201ENST00000342988 APOLD1Q96LR9 279 aa17.22■□□□□ 0.35
SMAD4-201ENST00000342988 TSSK3Q96PN8 268 aa17.22■□□□□ 0.35
SMAD4-201ENST00000342988 ABCG8Q9H221 673 aa17.22■□□□□ 0.35
SMAD4-201ENST00000342988 GPRC5CQ9NQ84 441 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms