RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 DLEC1Q9Y238 1755 aa12.09□□□□□ -0.47
SNRNP48-201ENST00000342415 RREB1Q92766 1687 aa12.09□□□□□ -0.47
SNRNP48-201ENST00000342415 FADS2P1A8MWK0 482 aa12.08□□□□□ -0.47
SNRNP48-201ENST00000342415 MATN4O95460 622 aa12.08□□□□□ -0.47
SNRNP48-201ENST00000342415 ELFN1P0C7U0 828 aa12.08□□□□□ -0.47
SNRNP48-201ENST00000342415 GGT1P19440 569 aa12.08□□□□□ -0.47
SNRNP48-201ENST00000342415 PRPS1L1P21108 318 aa12.08□□□□□ -0.47
SNRNP48-201ENST00000342415 STK19P49842 368 aaPredicted RBP12.08□□□□□ -0.47
SNRNP48-201ENST00000342415 OLR1P78380 273 aa12.08□□□□□ -0.47
SNRNP48-201ENST00000342415 CD83Q01151 205 aa12.08□□□□□ -0.47
SNRNP48-201ENST00000342415 KLHL12Q53G59 568 aa12.08□□□□□ -0.47
SNRNP48-201ENST00000342415 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.08□□□□□ -0.47
SNRNP48-201ENST00000342415 GCNT6Q5T4J0 391 aa12.08□□□□□ -0.47
SNRNP48-201ENST00000342415 KIAA1614Q5VZ46 1190 aa12.08□□□□□ -0.47
SNRNP48-201ENST00000342415 RAB43Q86YS6 212 aa12.08□□□□□ -0.47
SNRNP48-201ENST00000342415 PELI3Q8N2H9 469 aa12.08□□□□□ -0.47
SNRNP48-201ENST00000342415 OR2T11Q8NH01 316 aa12.08□□□□□ -0.47
SNRNP48-201ENST00000342415 ARRDC2Q8TBH0 407 aa12.08□□□□□ -0.47
SNRNP48-201ENST00000342415 TBC1D15Q8TC07 691 aa12.08□□□□□ -0.47
SNRNP48-201ENST00000342415 ITPAQ9BY32 194 aa12.08□□□□□ -0.47
SNRNP48-201ENST00000342415 TBCCD1Q9NVR7 557 aa12.08□□□□□ -0.47
SNRNP48-201ENST00000342415 STMN3Q9NZ72 180 aa12.08□□□□□ -0.47
SNRNP48-201ENST00000342415 GPRC5BQ9NZH0 403 aa12.08□□□□□ -0.47
SNRNP48-201ENST00000342415 HCSTQ9UBK5 93 aa12.08□□□□□ -0.47
SNRNP48-201ENST00000342415 CD300AQ9UGN4 299 aa12.08□□□□□ -0.47
SNRNP48-201ENST00000342415 F5P12259 2224 aa12.08□□□□□ -0.48
SNRNP48-201ENST00000342415 ILVBLA1L0T0 632 aa12.08□□□□□ -0.48
SNRNP48-201ENST00000342415 GSAPA4D1B5 854 aa12.08□□□□□ -0.48
SNRNP48-201ENST00000342415 IFI30P13284 250 aa12.08□□□□□ -0.48
SNRNP48-201ENST00000342415 KDELR2P33947 212 aa12.08□□□□□ -0.48
SNRNP48-201ENST00000342415 ST3GAL4Q11206 333 aa12.08□□□□□ -0.48
SNRNP48-201ENST00000342415 SEMA3BQ13214 749 aa12.08□□□□□ -0.48
SNRNP48-201ENST00000342415 CRHR2Q13324 411 aa12.08□□□□□ -0.48
SNRNP48-201ENST00000342415 TUBA3CQ13748 450 aa12.08□□□□□ -0.48
SNRNP48-201ENST00000342415 IFI44LQ53G44 452 aa12.08□□□□□ -0.48
SNRNP48-201ENST00000342415 ANXA8L1Q5VT79 327 aa12.08□□□□□ -0.48
SNRNP48-201ENST00000342415 BORAQ6PGQ7 559 aa12.08□□□□□ -0.48
SNRNP48-201ENST00000342415 SUSD1Q6UWL2 747 aa12.08□□□□□ -0.48
SNRNP48-201ENST00000342415 PGBD5Q8N414 524 aa12.08□□□□□ -0.48
SNRNP48-201ENST00000342415 CD200R1Q8TD46 325 aa12.08□□□□□ -0.48
SNRNP48-201ENST00000342415 STARD8Q92502 1023 aa12.08□□□□□ -0.48
SNRNP48-201ENST00000342415 UBE2FQ969M7 185 aa12.08□□□□□ -0.48
SNRNP48-201ENST00000342415 C8orf48Q96LL4 319 aa12.08□□□□□ -0.48
SNRNP48-201ENST00000342415 SERHL2Q9H4I8 314 aa12.08□□□□□ -0.48
SNRNP48-201ENST00000342415 SERHLQ9NQF3 203 aa12.08□□□□□ -0.48
SNRNP48-201ENST00000342415 DNAJC27Q9NZQ0 273 aa12.08□□□□□ -0.48
SNRNP48-201ENST00000342415 FLRT1Q9NZU1 646 aa12.08□□□□□ -0.48
SNRNP48-201ENST00000342415 CDV3Q9UKY7 258 aaKnown RBP12.08□□□□□ -0.48
SNRNP48-201ENST00000342415 TTC3P53804 2025 aa12.08□□□□□ -0.48
SNRNP48-201ENST00000342415 RPLP2P05387 115 aaKnown RBP12.08□□□□□ -0.48
SNRNP48-201ENST00000342415 MAGEA10P43363 369 aaPredicted RBP12.08□□□□□ -0.48
SNRNP48-201ENST00000342415 MAGEA12P43365 314 aa12.08□□□□□ -0.48
SNRNP48-201ENST00000342415 SRSF11Q05519 484 aaKnown RBP12.08□□□□□ -0.48
SNRNP48-201ENST00000342415 GALNT1Q10472 559 aaPredicted RBP12.08□□□□□ -0.48
SNRNP48-201ENST00000342415 IER5LQ5T953 404 aa12.08□□□□□ -0.48
SNRNP48-201ENST00000342415 LRRC66Q68CR7 880 aa12.08□□□□□ -0.48
SNRNP48-201ENST00000342415 TMEM220Q6QAJ8 160 aa12.08□□□□□ -0.48
SNRNP48-201ENST00000342415 Q6ZVU0 165 aa12.08□□□□□ -0.48
SNRNP48-201ENST00000342415 ZNF467Q7Z7K2 595 aaPredicted RBP12.08□□□□□ -0.48
SNRNP48-201ENST00000342415 TSPAN33Q86UF1 283 aa12.08□□□□□ -0.48
SNRNP48-201ENST00000342415 CACTIN-AS1Q8N1I8 211 aa12.08□□□□□ -0.48
SNRNP48-201ENST00000342415 AP2M1Q96CW1 435 aa12.08□□□□□ -0.48
SNRNP48-201ENST00000342415 CEP295NLQ96MC4 621 aa12.08□□□□□ -0.48
SNRNP48-201ENST00000342415 TMEM39AQ9NV64 488 aa12.08□□□□□ -0.48
SNRNP48-201ENST00000342415 ACSL6Q9UKU0 697 aa12.08□□□□□ -0.48
SNRNP48-201ENST00000342415 SLC35F4A4IF30 521 aa12.08□□□□□ -0.48
SNRNP48-201ENST00000342415 PCDH7O60245 1069 aa12.08□□□□□ -0.48
SNRNP48-201ENST00000342415 ADRA1AP35348 466 aa12.08□□□□□ -0.48
SNRNP48-201ENST00000342415 TARDBPQ13148 414 aaKnown RBP eCLIP12.08□□□□□ -0.48
SNRNP48-201ENST00000342415 CLEC12AQ5QGZ9 265 aa12.08□□□□□ -0.48
SNRNP48-201ENST00000342415 LUZP2Q86TE4 346 aa12.08□□□□□ -0.48
SNRNP48-201ENST00000342415 MAELQ96JY0 434 aaKnown RBP12.08□□□□□ -0.48
SNRNP48-201ENST00000342415 MRPL9Q9BYD2 267 aaKnown RBP12.08□□□□□ -0.48
SNRNP48-201ENST00000342415 EHD1Q9H4M9 534 aa12.08□□□□□ -0.48
SNRNP48-201ENST00000342415 A0A096LPI6 279 aa12.07□□□□□ -0.48
SNRNP48-201ENST00000342415 COCHO43405 550 aa12.07□□□□□ -0.48
SNRNP48-201ENST00000342415 PFKLP17858 780 aa12.07□□□□□ -0.48
SNRNP48-201ENST00000342415 C21orf33P30042 268 aaPredicted RBP12.07□□□□□ -0.48
SNRNP48-201ENST00000342415 NR4A2P43354 598 aa12.07□□□□□ -0.48
SNRNP48-201ENST00000342415 CDK5R2Q13319 367 aa12.07□□□□□ -0.48
SNRNP48-201ENST00000342415 MTA1Q13330 715 aa12.07□□□□□ -0.48
SNRNP48-201ENST00000342415 NFATC2Q13469 925 aa12.07□□□□□ -0.48
SNRNP48-201ENST00000342415 APOFQ13790 326 aa12.07□□□□□ -0.48
SNRNP48-201ENST00000342415 IL18Q14116 193 aa12.07□□□□□ -0.48
SNRNP48-201ENST00000342415 NOXRED1Q6NXP6 359 aa12.07□□□□□ -0.48
SNRNP48-201ENST00000342415 ALKAL1Q6UXT8 129 aa12.07□□□□□ -0.48
SNRNP48-201ENST00000342415 RBM12BQ8IXT5 1001 aaKnown RBP12.07□□□□□ -0.48
SNRNP48-201ENST00000342415 DTX3Q8N9I9 347 aa12.07□□□□□ -0.48
SNRNP48-201ENST00000342415 NFKBIDQ8NI38 313 aa12.07□□□□□ -0.48
SNRNP48-201ENST00000342415 RAB8BQ92930 207 aa12.07□□□□□ -0.48
SNRNP48-201ENST00000342415 REPS1Q96D71 796 aa12.07□□□□□ -0.48
SNRNP48-201ENST00000342415 UTS2RQ9UKP6 389 aa12.07□□□□□ -0.48
SNRNP48-201ENST00000342415 GTF2A1LQ9UNN4 478 aa12.07□□□□□ -0.48
SNRNP48-201ENST00000342415 C2orf78A6NCI8 922 aa12.07□□□□□ -0.48
SNRNP48-201ENST00000342415 CYP2A6P11509 494 aaPredicted RBP12.07□□□□□ -0.48
SNRNP48-201ENST00000342415 S100A1P23297 94 aa12.07□□□□□ -0.48
SNRNP48-201ENST00000342415 CRHBPP24387 322 aa12.07□□□□□ -0.48
SNRNP48-201ENST00000342415 PIGAP37287 484 aa12.07□□□□□ -0.48
SNRNP48-201ENST00000342415 MAPK8P45983 427 aa12.07□□□□□ -0.48
SNRNP48-201ENST00000342415 SLC15A1P46059 708 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms