RNA–Protein interactions for RNA: ENST00000340958.3

CLDN4-201, Transcript of claudin 4, humanhuman

APPRIS P1 BASIC

Gene CLDN4, Length 1,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-201ENST00000340958 Q6ZSR9 355 aa16.74■□□□□ 0.27
CLDN4-201ENST00000340958 TRIM46Q7Z4K8 759 aa16.74■□□□□ 0.27
CLDN4-201ENST00000340958 KIF2BQ8N4N8 673 aa16.74■□□□□ 0.27
CLDN4-201ENST00000340958 FAM46DQ8NEK8 389 aa16.74■□□□□ 0.27
CLDN4-201ENST00000340958 OR4E2Q8NGC2 313 aa16.74■□□□□ 0.27
CLDN4-201ENST00000340958 OR2L8Q8NGY9 312 aa16.74■□□□□ 0.27
CLDN4-201ENST00000340958 JPH3Q8WXH2 748 aaPredicted RBP16.74■□□□□ 0.27
CLDN4-201ENST00000340958 KIR3DX1Q9H7L2 352 aa16.74■□□□□ 0.27
CLDN4-201ENST00000340958 CAAP1Q9H8G2 361 aa16.74■□□□□ 0.27
CLDN4-201ENST00000340958 CCDC167Q9P0B6 97 aa16.74■□□□□ 0.27
CLDN4-201ENST00000340958 ZNF624Q9P2J8 865 aaPredicted RBP16.74■□□□□ 0.27
CLDN4-201ENST00000340958 B2RBV5 119 aa16.73■□□□□ 0.27
CLDN4-201ENST00000340958 PROB1E7EW31 1015 aa16.73■□□□□ 0.27
CLDN4-201ENST00000340958 H0YHG0 523 aa16.73■□□□□ 0.27
CLDN4-201ENST00000340958 LSM1O15116 133 aaKnown RBP16.73■□□□□ 0.27
CLDN4-201ENST00000340958 BCAT2O15382 392 aaPredicted RBP16.73■□□□□ 0.27
CLDN4-201ENST00000340958 GYG2O15488 501 aa16.73■□□□□ 0.27
CLDN4-201ENST00000340958 HRO43593 1189 aa16.73■□□□□ 0.27
CLDN4-201ENST00000340958 CSF2P04141 144 aa16.73■□□□□ 0.27
CLDN4-201ENST00000340958 CELA2BP08218 269 aaPredicted RBP16.73■□□□□ 0.27
CLDN4-201ENST00000340958 ALDOCP09972 364 aaKnown RBP16.73■□□□□ 0.27
CLDN4-201ENST00000340958 COX4I1P13073 169 aa16.73■□□□□ 0.27
CLDN4-201ENST00000340958 CD22P20273 847 aa16.73■□□□□ 0.27
CLDN4-201ENST00000340958 PRDX6P30041 224 aa16.73■□□□□ 0.27
CLDN4-201ENST00000340958 SHMT2P34897 504 aa16.73■□□□□ 0.27
CLDN4-201ENST00000340958 CSNK1EP49674 416 aaKnown RBP16.73■□□□□ 0.27
CLDN4-201ENST00000340958 AFF3P51826 1226 aaKnown RBP16.73■□□□□ 0.27
CLDN4-201ENST00000340958 RPL38P63173 70 aaKnown RBP16.73■□□□□ 0.27
CLDN4-201ENST00000340958 MAD2L1Q13257 205 aaPredicted RBP16.73■□□□□ 0.27
CLDN4-201ENST00000340958 ELOCQ15369 112 aa16.73■□□□□ 0.27
CLDN4-201ENST00000340958 MAPRE2Q15555 327 aa16.73■□□□□ 0.27
CLDN4-201ENST00000340958 AGKQ53H12 422 aa16.73■□□□□ 0.27
CLDN4-201ENST00000340958 OGFOD2Q6N063 350 aa16.73■□□□□ 0.27
CLDN4-201ENST00000340958 IYDQ6PHW0 289 aa16.73■□□□□ 0.27
CLDN4-201ENST00000340958 AMIGO1Q86WK6 493 aa16.73■□□□□ 0.27
CLDN4-201ENST00000340958 SNX32Q86XE0 403 aa16.73■□□□□ 0.27
CLDN4-201ENST00000340958 KRT78Q8N1N4 520 aa16.73■□□□□ 0.27
CLDN4-201ENST00000340958 LMX1AQ8TE12 382 aa16.73■□□□□ 0.27
CLDN4-201ENST00000340958 UBE2E3Q969T4 207 aa16.73■□□□□ 0.27
CLDN4-201ENST00000340958 MTERF1Q99551 399 aaKnown RBP16.73■□□□□ 0.27
CLDN4-201ENST00000340958 MENTQ9BUN1 341 aa16.73■□□□□ 0.27
CLDN4-201ENST00000340958 SRMSQ9H3Y6 488 aa16.73■□□□□ 0.27
CLDN4-201ENST00000340958 ZNF385DQ9H6B1 395 aa16.73■□□□□ 0.27
CLDN4-201ENST00000340958 LRTM1Q9HBL6 345 aa16.73■□□□□ 0.27
CLDN4-201ENST00000340958 ICKQ9UPZ9 632 aa16.73■□□□□ 0.27
CLDN4-201ENST00000340958 SH2B3Q9UQQ2 575 aa16.73■□□□□ 0.27
CLDN4-201ENST00000340958 EIF3LQ9Y262 564 aaKnown RBP16.73■□□□□ 0.27
CLDN4-201ENST00000340958 PCDHB11Q9Y5F2 797 aa16.73■□□□□ 0.27
CLDN4-201ENST00000340958 GPR179Q6PRD1 2367 aa16.73■□□□□ 0.27
CLDN4-201ENST00000340958 OR5K4A6NMS3 321 aa16.73■□□□□ 0.27
CLDN4-201ENST00000340958 H0YIV9 168 aa16.73■□□□□ 0.27
CLDN4-201ENST00000340958 PTPN4P29074 926 aa16.73■□□□□ 0.27
CLDN4-201ENST00000340958 SLC19A1P41440 591 aa16.73■□□□□ 0.27
CLDN4-201ENST00000340958 CASP2P42575 452 aa16.73■□□□□ 0.27
CLDN4-201ENST00000340958 ATP4BP51164 291 aa16.73■□□□□ 0.27
CLDN4-201ENST00000340958 TEAD4Q15561 434 aa16.73■□□□□ 0.27
CLDN4-201ENST00000340958 LYSMD4Q5XG99 296 aa16.73■□□□□ 0.27
CLDN4-201ENST00000340958 RNF165Q6ZSG1 346 aa16.73■□□□□ 0.27
CLDN4-201ENST00000340958 ADCK2Q7Z695 626 aa16.73■□□□□ 0.27
CLDN4-201ENST00000340958 GKN2Q86XP6 184 aa16.73■□□□□ 0.27
CLDN4-201ENST00000340958 LINC01555Q8NAE3 123 aa16.73■□□□□ 0.27
CLDN4-201ENST00000340958 RP9Q8TA86 221 aaKnown RBP16.73■□□□□ 0.27
CLDN4-201ENST00000340958 LRRC61Q9BV99 259 aa16.73■□□□□ 0.27
CLDN4-201ENST00000340958 ACPTQ9BZG2 426 aa16.73■□□□□ 0.27
CLDN4-201ENST00000340958 EHD1Q9H4M9 534 aa16.73■□□□□ 0.27
CLDN4-201ENST00000340958 NOP53Q9NZM5 478 aaKnown RBP16.73■□□□□ 0.27
CLDN4-201ENST00000340958 SPASTQ9UBP0 616 aa16.73■□□□□ 0.27
CLDN4-201ENST00000340958 PLXND1Q9Y4D7 1925 aa16.72■□□□□ 0.27
CLDN4-201ENST00000340958 SDK1Q7Z5N4 2213 aa16.72■□□□□ 0.27
CLDN4-201ENST00000340958 KIR2DS5A0A0G2JLQ3 304 aa16.72■□□□□ 0.27
CLDN4-201ENST00000340958 A0A0G2JNG1 304 aa16.72■□□□□ 0.27
CLDN4-201ENST00000340958 B4DGG1 531 aa16.72■□□□□ 0.27
CLDN4-201ENST00000340958 KIR2DS3K7RE56 304 aa16.72■□□□□ 0.27
CLDN4-201ENST00000340958 DNAJC8O75937 253 aaPredicted RBP16.72■□□□□ 0.27
CLDN4-201ENST00000340958 PRR35P0CG20 571 aa16.72■□□□□ 0.27
CLDN4-201ENST00000340958 NME1P15531 152 aaKnown RBP16.72■□□□□ 0.27
CLDN4-201ENST00000340958 CXCR2P25025 360 aa16.72■□□□□ 0.27
CLDN4-201ENST00000340958 PSMB5P28074 263 aa16.72■□□□□ 0.27
CLDN4-201ENST00000340958 CCR8P51685 355 aa16.72■□□□□ 0.27
CLDN4-201ENST00000340958 DIO3P55073 304 aa16.72■□□□□ 0.27
CLDN4-201ENST00000340958 PHEXP78562 749 aa16.72■□□□□ 0.27
CLDN4-201ENST00000340958 MEF2AQ02078 507 aaPredicted RBP16.72■□□□□ 0.27
CLDN4-201ENST00000340958 EMX2Q04743 252 aa16.72■□□□□ 0.27
CLDN4-201ENST00000340958 PCDH1Q08174 1060 aa16.72■□□□□ 0.27
CLDN4-201ENST00000340958 BIRC2Q13490 618 aa16.72■□□□□ 0.27
CLDN4-201ENST00000340958 CUL3Q13618 768 aa16.72■□□□□ 0.27
CLDN4-201ENST00000340958 KIR2DS5Q14953 304 aa16.72■□□□□ 0.27
CLDN4-201ENST00000340958 RBBP5Q15291 538 aaKnown RBP16.72■□□□□ 0.27
CLDN4-201ENST00000340958 CACHD1Q5VU97 1274 aa16.72■□□□□ 0.27
CLDN4-201ENST00000340958 C11orf74Q86VG3 221 aa16.72■□□□□ 0.27
CLDN4-201ENST00000340958 ZDHHC1Q8WTX9 485 aa16.72■□□□□ 0.27
CLDN4-201ENST00000340958 DNASE2BQ8WZ79 361 aa16.72■□□□□ 0.27
CLDN4-201ENST00000340958 LRMDAQ9H2I8 198 aa16.72■□□□□ 0.27
CLDN4-201ENST00000340958 GEMIN8Q9NWZ8 242 aaKnown RBP16.72■□□□□ 0.27
CLDN4-201ENST00000340958 C1orf109Q9NX04 203 aa16.72■□□□□ 0.27
CLDN4-201ENST00000340958 PIEZO1Q92508 2521 aa16.72■□□□□ 0.27
CLDN4-201ENST00000340958 PIPSLA2A3N6 862 aa16.71■□□□□ 0.27
CLDN4-201ENST00000340958 A6NCN8 305 aa16.71■□□□□ 0.27
CLDN4-201ENST00000340958 ISM1B1AKI9 464 aa16.71■□□□□ 0.27
CLDN4-201ENST00000340958 VILLO15195 856 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms