RNA–Protein interactions for RNA: ENST00000340058.5

RET-201, Transcript of ret proto-oncogene, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RET, Length 4,149 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RET-201ENST00000340058 ZNHIT3Q15649 155 aaPredicted RBP14.29□□□□□ -0.12
RET-201ENST00000340058 AMZ1Q400G9 498 aa14.29□□□□□ -0.12
RET-201ENST00000340058 ZNF805Q5CZA5 627 aa14.29□□□□□ -0.12
RET-201ENST00000340058 SMARCD3Q6STE5 483 aa14.29□□□□□ -0.12
RET-201ENST00000340058 MACC1Q6ZN28 852 aa14.29□□□□□ -0.12
RET-201ENST00000340058 WFIKKN2Q8TEU8 576 aa14.29□□□□□ -0.12
RET-201ENST00000340058 NODALQ96S42 347 aa14.29□□□□□ -0.12
RET-201ENST00000340058 ZNF382Q96SR6 550 aa14.29□□□□□ -0.12
RET-201ENST00000340058 CHCHD6Q9BRQ6 235 aa14.29□□□□□ -0.12
RET-201ENST00000340058 MAPRE3Q9UPY8 281 aa14.29□□□□□ -0.12
RET-201ENST00000340058 OR1A2Q9Y585 309 aa14.29□□□□□ -0.12
RET-201ENST00000340058 TRIOBPQ9H2D6 2365 aa14.28□□□□□ -0.12
RET-201ENST00000340058 CPSF4LA6NMK7 179 aaKnown RBP14.28□□□□□ -0.12
RET-201ENST00000340058 SCN2BO60939 215 aa14.28□□□□□ -0.12
RET-201ENST00000340058 ERN1O75460 977 aaKnown RBP14.28□□□□□ -0.12
RET-201ENST00000340058 BMP7P18075 431 aa14.28□□□□□ -0.12
RET-201ENST00000340058 HOXD9P28356 352 aaPredicted RBP14.28□□□□□ -0.12
RET-201ENST00000340058 EEFSECP57772 596 aaKnown RBP14.28□□□□□ -0.12
RET-201ENST00000340058 ARF5P84085 180 aa14.28□□□□□ -0.12
RET-201ENST00000340058 NR1D2Q14995 579 aa14.28□□□□□ -0.12
RET-201ENST00000340058 RSBN1Q5VWQ0 802 aaPredicted RBP14.28□□□□□ -0.12
RET-201ENST00000340058 ZNF730Q6ZMV8 503 aa14.28□□□□□ -0.12
RET-201ENST00000340058 GSTO2Q9H4Y5 243 aa14.28□□□□□ -0.12
RET-201ENST00000340058 MRPS30Q9NP92 439 aaKnown RBP14.28□□□□□ -0.12
RET-201ENST00000340058 ACTR3BQ9P1U1 418 aa14.28□□□□□ -0.12
RET-201ENST00000340058 MCM3APO60318 1980 aa14.28□□□□□ -0.12
RET-201ENST00000340058 IGLON5A6NGN9 336 aa14.28□□□□□ -0.12
RET-201ENST00000340058 MED26O95402 600 aa14.28□□□□□ -0.12
RET-201ENST00000340058 SAGP10523 405 aaPredicted RBP14.28□□□□□ -0.12
RET-201ENST00000340058 GRIN2CQ14957 1233 aa14.28□□□□□ -0.12
RET-201ENST00000340058 OTUD1Q5VV17 481 aaPredicted RBP14.28□□□□□ -0.12
RET-201ENST00000340058 CLIP4Q8N3C7 705 aa14.28□□□□□ -0.12
RET-201ENST00000340058 SLC39A13Q96H72 371 aa14.28□□□□□ -0.12
RET-201ENST00000340058 KCNC2Q96PR1 638 aa14.28□□□□□ -0.12
RET-201ENST00000340058 C17orf62Q9BQA9 187 aa14.28□□□□□ -0.12
RET-201ENST00000340058 SEZ6LQ9BYH1 1024 aa14.28□□□□□ -0.12
RET-201ENST00000340058 KRCC1Q9NPI7 259 aaPredicted RBP14.28□□□□□ -0.12
RET-201ENST00000340058 I6L893 689 aaPredicted RBP14.28□□□□□ -0.12
RET-201ENST00000340058 C6orf47O95873 294 aa14.28□□□□□ -0.12
RET-201ENST00000340058 HLA-DQA2P01906 255 aa14.28□□□□□ -0.12
RET-201ENST00000340058 CCDC159P0C7I6 412 aa14.28□□□□□ -0.12
RET-201ENST00000340058 EBLN1P0CF75 366 aa14.28□□□□□ -0.12
RET-201ENST00000340058 AVPR1BP47901 424 aa14.28□□□□□ -0.12
RET-201ENST00000340058 SEPHS1P49903 392 aa14.28□□□□□ -0.12
RET-201ENST00000340058 MXD1Q05195 221 aa14.28□□□□□ -0.12
RET-201ENST00000340058 PIGFQ07326 219 aa14.28□□□□□ -0.12
RET-201ENST00000340058 DAG1Q14118 895 aa14.28□□□□□ -0.12
RET-201ENST00000340058 SNAPC1Q16533 368 aa14.28□□□□□ -0.12
RET-201ENST00000340058 CD200R1Q8TD46 325 aa14.28□□□□□ -0.12
RET-201ENST00000340058 NT5C3BQ969T7 300 aa14.28□□□□□ -0.12
RET-201ENST00000340058 EFCAB11Q9BUY7 163 aa14.28□□□□□ -0.12
RET-201ENST00000340058 HDHD2Q9H0R4 259 aa14.28□□□□□ -0.12
RET-201ENST00000340058 ACSL6Q9UKU0 697 aa14.28□□□□□ -0.12
RET-201ENST00000340058 PDE10AQ9Y233 779 aa14.28□□□□□ -0.12
RET-201ENST00000340058 CCL26Q9Y258 94 aa14.28□□□□□ -0.12
RET-201ENST00000340058 LRRC42Q9Y546 428 aa14.28□□□□□ -0.12
RET-201ENST00000340058 PAPPAQ13219 1627 aa14.27□□□□□ -0.12
RET-201ENST00000340058 NDUFS4O43181 175 aa14.27□□□□□ -0.12
RET-201ENST00000340058 CREG1O75629 220 aa14.27□□□□□ -0.12
RET-201ENST00000340058 SLC16A8O95907 504 aa14.27□□□□□ -0.12
RET-201ENST00000340058 CTSAP10619 480 aa14.27□□□□□ -0.12
RET-201ENST00000340058 CMPK1P30085 196 aa14.27□□□□□ -0.12
RET-201ENST00000340058 BMPR1AP36894 532 aa14.27□□□□□ -0.12
RET-201ENST00000340058 IFNGR2P38484 337 aa14.27□□□□□ -0.12
RET-201ENST00000340058 KCNC1P48547 511 aa14.27□□□□□ -0.12
RET-201ENST00000340058 SPINT3P49223 89 aa14.27□□□□□ -0.12
RET-201ENST00000340058 TOMM20Q15388 145 aa14.27□□□□□ -0.12
RET-201ENST00000340058 DENND5AQ6IQ26 1287 aa14.27□□□□□ -0.12
RET-201ENST00000340058 NOXRED1Q6NXP6 359 aa14.27□□□□□ -0.12
RET-201ENST00000340058 ERICH5Q6P6B1 374 aa14.27□□□□□ -0.12
RET-201ENST00000340058 ZNF655Q8N720 491 aaPredicted RBP14.27□□□□□ -0.12
RET-201ENST00000340058 RHEBL1Q8TAI7 183 aa14.27□□□□□ -0.12
RET-201ENST00000340058 TREX1Q9NSU2 369 aa14.27□□□□□ -0.12
RET-201ENST00000340058 DNAAF2Q9NVR5 837 aaKnown RBP14.27□□□□□ -0.12
RET-201ENST00000340058 DNAJB9Q9UBS3 223 aa14.27□□□□□ -0.12
RET-201ENST00000340058 SLC22A2O15244 555 aa14.27□□□□□ -0.12
RET-201ENST00000340058 LAMP2P13473 410 aa14.27□□□□□ -0.12
RET-201ENST00000340058 HNMTP50135 292 aa14.27□□□□□ -0.12
RET-201ENST00000340058 PGDP52209 483 aa14.27□□□□□ -0.12
RET-201ENST00000340058 NCBP2P52298 156 aaKnown RBP eCLIP14.27□□□□□ -0.12
RET-201ENST00000340058 RPS26P62854 115 aaKnown RBP14.27□□□□□ -0.12
RET-201ENST00000340058 BIKQ13323 160 aa14.27□□□□□ -0.12
RET-201ENST00000340058 C1orf61Q13536 156 aa14.27□□□□□ -0.12
RET-201ENST00000340058 DOC2AQ14183 400 aa14.27□□□□□ -0.12
RET-201ENST00000340058 NFE2L1Q14494 772 aa14.27□□□□□ -0.12
RET-201ENST00000340058 SLC8B1Q6J4K2 584 aa14.27□□□□□ -0.12
RET-201ENST00000340058 ARMCX6Q7L4S7 300 aa14.27□□□□□ -0.12
RET-201ENST00000340058 TCEAL8Q8IYN2 117 aa14.27□□□□□ -0.12
RET-201ENST00000340058 GIPC3Q8TF64 312 aa14.27□□□□□ -0.12
RET-201ENST00000340058 OVCA2Q8WZ82 227 aa14.27□□□□□ -0.12
RET-201ENST00000340058 C1GALT1C1Q96EU7 318 aa14.27□□□□□ -0.12
RET-201ENST00000340058 ITM2CQ9NQX7 267 aa14.27□□□□□ -0.12
RET-201ENST00000340058 C5AR2Q9P296 337 aa14.27□□□□□ -0.12
RET-201ENST00000340058 CLEC4AQ9UMR7 237 aa14.27□□□□□ -0.12
RET-201ENST00000340058 TPRP12270 2363 aaKnown RBP14.27□□□□□ -0.13
RET-201ENST00000340058 MAST2Q6P0Q8 1798 aa14.27□□□□□ -0.13
RET-201ENST00000340058 EDDM13A0A1B0GTR0 161 aa14.27□□□□□ -0.13
RET-201ENST00000340058 URADA6NGE7 173 aa14.27□□□□□ -0.13
RET-201ENST00000340058 B4DGG1 531 aa14.27□□□□□ -0.13
RET-201ENST00000340058 SNAP29O95721 258 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms