RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 CCNA2P20248 432 aa10.48□□□□□ -0.73
RTN3-201ENST00000338850 SPAM1P38567 509 aa10.48□□□□□ -0.73
RTN3-201ENST00000338850 NSG1P42857 185 aa10.48□□□□□ -0.73
RTN3-201ENST00000338850 TRPC1P48995 793 aa10.48□□□□□ -0.73
RTN3-201ENST00000338850 HNMTP50135 292 aa10.48□□□□□ -0.73
RTN3-201ENST00000338850 RPL38P63173 70 aaKnown RBP10.48□□□□□ -0.73
RTN3-201ENST00000338850 YBX1P67809 324 aaKnown RBP10.48□□□□□ -0.73
RTN3-201ENST00000338850 NFATC3Q12968 1075 aa10.48□□□□□ -0.73
RTN3-201ENST00000338850 SRSF5Q13243 272 aaKnown RBP10.48□□□□□ -0.73
RTN3-201ENST00000338850 KEAP1Q14145 624 aa10.48□□□□□ -0.73
RTN3-201ENST00000338850 ABRAXAS2Q15018 415 aa10.48□□□□□ -0.73
RTN3-201ENST00000338850 PDGFRLQ15198 375 aa10.48□□□□□ -0.73
RTN3-201ENST00000338850 ZNF77Q15935 545 aa10.48□□□□□ -0.73
RTN3-201ENST00000338850 MAPKAPK3Q16644 382 aa10.48□□□□□ -0.73
RTN3-201ENST00000338850 RSPO4Q2I0M5 234 aaPredicted RBP10.48□□□□□ -0.73
RTN3-201ENST00000338850 KLHL35Q6PF15 583 aa10.48□□□□□ -0.73
RTN3-201ENST00000338850 DET1Q7L5Y6 550 aa10.48□□□□□ -0.73
RTN3-201ENST00000338850 TAS2R42Q7RTR8 314 aa10.48□□□□□ -0.73
RTN3-201ENST00000338850 DGLUCYQ7Z3D6 616 aa10.48□□□□□ -0.73
RTN3-201ENST00000338850 IFNEQ86WN2 208 aa10.48□□□□□ -0.73
RTN3-201ENST00000338850 KLHDC8AQ8IYD2 350 aa10.48□□□□□ -0.73
RTN3-201ENST00000338850 L3MBTL4Q8NA19 623 aa10.48□□□□□ -0.73
RTN3-201ENST00000338850 SMYD1Q8NB12 490 aa10.48□□□□□ -0.73
RTN3-201ENST00000338850 TBC1D15Q8TC07 691 aa10.48□□□□□ -0.73
RTN3-201ENST00000338850 TRUB1Q8WWH5 349 aaKnown RBP10.48□□□□□ -0.73
RTN3-201ENST00000338850 SLC47A1Q96FL8 570 aa10.48□□□□□ -0.73
RTN3-201ENST00000338850 CIPCQ9C0C6 399 aa10.48□□□□□ -0.73
RTN3-201ENST00000338850 KAT8Q9H7Z6 458 aaKnown RBP10.48□□□□□ -0.73
RTN3-201ENST00000338850 ZFYVE1Q9HBF4 777 aa10.48□□□□□ -0.73
RTN3-201ENST00000338850 PREBQ9HCU5 417 aa10.48□□□□□ -0.73
RTN3-201ENST00000338850 GIN1Q9NXP7 522 aa10.48□□□□□ -0.73
RTN3-201ENST00000338850 WWOXQ9NZC7 414 aa10.48□□□□□ -0.73
RTN3-201ENST00000338850 VAPAQ9P0L0 249 aa10.48□□□□□ -0.73
RTN3-201ENST00000338850 SLAMF8Q9P0V8 285 aa10.48□□□□□ -0.73
RTN3-201ENST00000338850 NFKBIL1Q9UBC1 381 aaPredicted RBP10.48□□□□□ -0.73
RTN3-201ENST00000338850 EBF1Q9UH73 591 aa10.48□□□□□ -0.73
RTN3-201ENST00000338850 PSME2Q9UL46 239 aa10.48□□□□□ -0.73
RTN3-201ENST00000338850 RAB23Q9ULC3 237 aa10.48□□□□□ -0.73
RTN3-201ENST00000338850 KCNE1BA0A087WTH5 132 aa10.47□□□□□ -0.73
RTN3-201ENST00000338850 TRAV19A0A0A6YYK7 116 aa10.47□□□□□ -0.73
RTN3-201ENST00000338850 MED19A0JLT2 244 aaPredicted RBP10.47□□□□□ -0.73
RTN3-201ENST00000338850 C2orf78A6NCI8 922 aa10.47□□□□□ -0.73
RTN3-201ENST00000338850 NCF1BA6NI72 391 aaPredicted RBP10.47□□□□□ -0.73
RTN3-201ENST00000338850 NCF1CA8MVU1 366 aaPredicted RBP10.47□□□□□ -0.73
RTN3-201ENST00000338850 C9JVG2 144 aa10.47□□□□□ -0.73
RTN3-201ENST00000338850 CXCR6O00574 342 aa10.47□□□□□ -0.73
RTN3-201ENST00000338850 NUAK1O60285 661 aa10.47□□□□□ -0.73
RTN3-201ENST00000338850 ATE1O95260 518 aa10.47□□□□□ -0.73
RTN3-201ENST00000338850 CLDN9O95484 217 aa10.47□□□□□ -0.73
RTN3-201ENST00000338850 IGSF6O95976 241 aa10.47□□□□□ -0.73
RTN3-201ENST00000338850 CKMP06732 381 aa10.47□□□□□ -0.73
RTN3-201ENST00000338850 ANXA5P08758 320 aa10.47□□□□□ -0.73
RTN3-201ENST00000338850 NCF1P14598 390 aaPredicted RBP10.47□□□□□ -0.73
RTN3-201ENST00000338850 CNR2P34972 360 aa10.47□□□□□ -0.73
RTN3-201ENST00000338850 AP1S2P56377 157 aa10.47□□□□□ -0.73
RTN3-201ENST00000338850 MTPNP58546 118 aa10.47□□□□□ -0.73
RTN3-201ENST00000338850 MVKQ03426 396 aa10.47□□□□□ -0.73
RTN3-201ENST00000338850 KCNC4Q03721 635 aa10.47□□□□□ -0.73
RTN3-201ENST00000338850 LRRC74AQ0VAA2 488 aa10.47□□□□□ -0.73
RTN3-201ENST00000338850 SIM2Q14190 667 aaPredicted RBP10.47□□□□□ -0.73
RTN3-201ENST00000338850 SELPLGQ14242 412 aa10.47□□□□□ -0.73
RTN3-201ENST00000338850 TBC1D25Q3MII6 688 aa10.47□□□□□ -0.73
RTN3-201ENST00000338850 RFTN2Q52LD8 501 aaPredicted RBP10.47□□□□□ -0.73
RTN3-201ENST00000338850 C6orf141Q5SZD1 244 aa10.47□□□□□ -0.73
RTN3-201ENST00000338850 ZNF691Q5VV52 312 aa10.47□□□□□ -0.73
RTN3-201ENST00000338850 XAF1Q6GPH4 301 aa10.47□□□□□ -0.73
RTN3-201ENST00000338850 SHQ1Q6PI26 577 aaKnown RBP10.47□□□□□ -0.73
RTN3-201ENST00000338850 TPGS1Q6ZTW0 290 aa10.47□□□□□ -0.73
RTN3-201ENST00000338850 GPR155Q7Z3F1 870 aa10.47□□□□□ -0.73
RTN3-201ENST00000338850 SERPINA11Q86U17 422 aa10.47□□□□□ -0.73
RTN3-201ENST00000338850 WDR5BQ86VZ2 330 aa10.47□□□□□ -0.73
RTN3-201ENST00000338850 EGFL6Q8IUX8 553 aa10.47□□□□□ -0.73
RTN3-201ENST00000338850 SPNS2Q8IVW8 549 aa10.47□□□□□ -0.73
RTN3-201ENST00000338850 MSRB3Q8IXL7 192 aa10.47□□□□□ -0.73
RTN3-201ENST00000338850 CLEC4FQ8N1N0 589 aa10.47□□□□□ -0.73
RTN3-201ENST00000338850 NXPE1Q8N323 547 aa10.47□□□□□ -0.73
RTN3-201ENST00000338850 TMEM132CQ8N3T6 1108 aa10.47□□□□□ -0.73
RTN3-201ENST00000338850 ARL14EPQ8N8R7 260 aaPredicted RBP10.47□□□□□ -0.73
RTN3-201ENST00000338850 CHDHQ8NE62 594 aaPredicted RBP10.47□□□□□ -0.73
RTN3-201ENST00000338850 PIK3C3Q8NEB9 887 aa10.47□□□□□ -0.73
RTN3-201ENST00000338850 MUL1Q969V5 352 aa10.47□□□□□ -0.73
RTN3-201ENST00000338850 EID2BQ96D98 161 aa10.47□□□□□ -0.73
RTN3-201ENST00000338850 ECHDC3Q96DC8 303 aa10.47□□□□□ -0.73
RTN3-201ENST00000338850 THAP11Q96EK4 314 aa10.47□□□□□ -0.73
RTN3-201ENST00000338850 CMTM7Q96FZ5 175 aa10.47□□□□□ -0.73
RTN3-201ENST00000338850 ITCHQ96J02 903 aa10.47□□□□□ -0.73
RTN3-201ENST00000338850 EXOC2Q96KP1 924 aa10.47□□□□□ -0.73
RTN3-201ENST00000338850 PPM1MQ96MI6 270 aa10.47□□□□□ -0.73
RTN3-201ENST00000338850 MCCC1Q96RQ3 725 aaPredicted RBP10.47□□□□□ -0.73
RTN3-201ENST00000338850 PAIP1Q9H074 479 aaKnown RBP10.47□□□□□ -0.73
RTN3-201ENST00000338850 ING2Q9H160 280 aa10.47□□□□□ -0.73
RTN3-201ENST00000338850 TNKS2Q9H2K2 1166 aa10.47□□□□□ -0.73
RTN3-201ENST00000338850 TRIT1Q9H3H1 467 aaKnown RBP10.47□□□□□ -0.73
RTN3-201ENST00000338850 SLC32A1Q9H598 525 aa10.47□□□□□ -0.73
RTN3-201ENST00000338850 ACTR8Q9H981 624 aa10.47□□□□□ -0.73
RTN3-201ENST00000338850 ANKHQ9HCJ1 492 aa10.47□□□□□ -0.73
RTN3-201ENST00000338850 FAM118AQ9NWS6 357 aa10.47□□□□□ -0.73
RTN3-201ENST00000338850 ELOVL2Q9NXB9 296 aa10.47□□□□□ -0.73
RTN3-201ENST00000338850 VPS51Q9UID3 782 aa10.47□□□□□ -0.73
RTN3-201ENST00000338850 CDC14AQ9UNH5 594 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms