RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 B2RBV5 119 aa14.17□□□□□ -0.14
CBX3-201ENST00000337620 VILLO15195 856 aa14.17□□□□□ -0.14
CBX3-201ENST00000337620 HNRNPCL1O60812 293 aaKnown RBP14.17□□□□□ -0.14
CBX3-201ENST00000337620 SEC22BO75396 215 aa14.17□□□□□ -0.14
CBX3-201ENST00000337620 IDO1P14902 403 aa14.17□□□□□ -0.14
CBX3-201ENST00000337620 RPL38P63173 70 aaKnown RBP14.17□□□□□ -0.14
CBX3-201ENST00000337620 MXRA7P84157 204 aa14.17□□□□□ -0.14
CBX3-201ENST00000337620 GSTA3Q16772 222 aa14.17□□□□□ -0.14
CBX3-201ENST00000337620 AGKQ53H12 422 aa14.17□□□□□ -0.14
CBX3-201ENST00000337620 LYSMD4Q5XG99 296 aa14.17□□□□□ -0.14
CBX3-201ENST00000337620 PAOXQ6QHF9 649 aa14.17□□□□□ -0.14
CBX3-201ENST00000337620 RINLQ6ZS11 566 aa14.17□□□□□ -0.14
CBX3-201ENST00000337620 SNX32Q86XE0 403 aa14.17□□□□□ -0.14
CBX3-201ENST00000337620 NAGSQ8N159 534 aa14.17□□□□□ -0.14
CBX3-201ENST00000337620 ZDHHC1Q8WTX9 485 aa14.17□□□□□ -0.14
CBX3-201ENST00000337620 WDR34Q96EX3 536 aa14.17□□□□□ -0.14
CBX3-201ENST00000337620 SRMSQ9H3Y6 488 aa14.17□□□□□ -0.14
CBX3-201ENST00000337620 EHD1Q9H4M9 534 aa14.17□□□□□ -0.14
CBX3-201ENST00000337620 LRTM1Q9HBL6 345 aa14.17□□□□□ -0.14
CBX3-201ENST00000337620 SLC40A1Q9NP59 571 aa14.17□□□□□ -0.14
CBX3-201ENST00000337620 CUEDC1Q9NWM3 386 aaPredicted RBP14.17□□□□□ -0.14
CBX3-201ENST00000337620 CPNE7Q9UBL6 633 aa14.17□□□□□ -0.14
CBX3-201ENST00000337620 DOLKQ9UPQ8 538 aa14.17□□□□□ -0.14
CBX3-201ENST00000337620 PCDHB11Q9Y5F2 797 aa14.17□□□□□ -0.14
CBX3-201ENST00000337620 LAMA1P25391 3075 aa14.17□□□□□ -0.14
CBX3-201ENST00000337620 PIPSLA2A3N6 862 aa14.16□□□□□ -0.14
CBX3-201ENST00000337620 THRAP10827 490 aa14.16□□□□□ -0.14
CBX3-201ENST00000337620 XRCC1P18887 633 aaPredicted RBP14.16□□□□□ -0.14
CBX3-201ENST00000337620 PTPN4P29074 926 aa14.16□□□□□ -0.14
CBX3-201ENST00000337620 PRDX6P30041 224 aa14.16□□□□□ -0.14
CBX3-201ENST00000337620 SHMT2P34897 504 aa14.16□□□□□ -0.14
CBX3-201ENST00000337620 ATP4BP51164 291 aa14.16□□□□□ -0.14
CBX3-201ENST00000337620 EMX2Q04743 252 aa14.16□□□□□ -0.14
CBX3-201ENST00000337620 LAPTM5Q13571 262 aa14.16□□□□□ -0.14
CBX3-201ENST00000337620 CYLC2Q14093 348 aaPredicted RBP14.16□□□□□ -0.14
CBX3-201ENST00000337620 E2F2Q14209 437 aa14.16□□□□□ -0.14
CBX3-201ENST00000337620 ICE2Q659A1 982 aa14.16□□□□□ -0.14
CBX3-201ENST00000337620 ADNP2Q6IQ32 1131 aa14.16□□□□□ -0.14
CBX3-201ENST00000337620 ASRGL1Q7L266 308 aa14.16□□□□□ -0.14
CBX3-201ENST00000337620 MIER2Q8N344 545 aa14.16□□□□□ -0.14
CBX3-201ENST00000337620 ZNF740Q8NDX6 193 aa14.16□□□□□ -0.14
CBX3-201ENST00000337620 OR9I1Q8NGQ6 314 aa14.16□□□□□ -0.14
CBX3-201ENST00000337620 SLC37A2Q8TED4 501 aa14.16□□□□□ -0.14
CBX3-201ENST00000337620 REPS1Q96D71 796 aa14.16□□□□□ -0.14
CBX3-201ENST00000337620 SPNS1Q9H2V7 528 aa14.16□□□□□ -0.14
CBX3-201ENST00000337620 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.16□□□□□ -0.14
CBX3-201ENST00000337620 SPHK1Q9NYA1 384 aa14.16□□□□□ -0.14
CBX3-201ENST00000337620 ZDBF2Q9HCK1 2354 aa14.16□□□□□ -0.14
CBX3-201ENST00000337620 KIR2DS5A0A0G2JLQ3 304 aa14.15□□□□□ -0.14
CBX3-201ENST00000337620 A0A0G2JNG1 304 aa14.15□□□□□ -0.14
CBX3-201ENST00000337620 B4DGG1 531 aa14.15□□□□□ -0.14
CBX3-201ENST00000337620 H7BY64 318 aa14.15□□□□□ -0.14
CBX3-201ENST00000337620 KIR2DS3K7RE56 304 aa14.15□□□□□ -0.14
CBX3-201ENST00000337620 EZRP15311 586 aaKnown RBP14.15□□□□□ -0.14
CBX3-201ENST00000337620 GPX3P22352 226 aa14.15□□□□□ -0.14
CBX3-201ENST00000337620 MNAT1P51948 309 aa14.15□□□□□ -0.14
CBX3-201ENST00000337620 HNRNPKP61978 463 aaKnown RBP eCLIP14.15□□□□□ -0.14
CBX3-201ENST00000337620 GPR18Q14330 331 aa14.15□□□□□ -0.14
CBX3-201ENST00000337620 KIR2DS5Q14953 304 aa14.15□□□□□ -0.14
CBX3-201ENST00000337620 IL23RQ5VWK5 629 aa14.15□□□□□ -0.14
CBX3-201ENST00000337620 GK5Q6ZS86 529 aa14.15□□□□□ -0.14
CBX3-201ENST00000337620 GKN2Q86XP6 184 aa14.15□□□□□ -0.14
CBX3-201ENST00000337620 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.15□□□□□ -0.14
CBX3-201ENST00000337620 FAM20CQ8IXL6 584 aa14.15□□□□□ -0.14
CBX3-201ENST00000337620 OR2A1Q8NGT9 310 aa14.15□□□□□ -0.14
CBX3-201ENST00000337620 HUS1BQ8NHY5 278 aa14.15□□□□□ -0.14
CBX3-201ENST00000337620 RP9Q8TA86 221 aaKnown RBP14.15□□□□□ -0.14
CBX3-201ENST00000337620 GAB3Q8WWW8 586 aa14.15□□□□□ -0.14
CBX3-201ENST00000337620 PRAP1Q96NZ9 151 aa14.15□□□□□ -0.14
CBX3-201ENST00000337620 LRMDAQ9H2I8 198 aa14.15□□□□□ -0.14
CBX3-201ENST00000337620 AIG1Q9NVV5 245 aa14.15□□□□□ -0.14
CBX3-201ENST00000337620 C1orf109Q9NX04 203 aa14.15□□□□□ -0.14
CBX3-201ENST00000337620 OR6C2Q9NZP2 312 aa14.15□□□□□ -0.14
CBX3-201ENST00000337620 SPASTQ9UBP0 616 aa14.15□□□□□ -0.14
CBX3-201ENST00000337620 POLR3HQ9Y535 204 aaPredicted RBP14.15□□□□□ -0.14
CBX3-201ENST00000337620 GPR45Q9Y5Y3 372 aa14.15□□□□□ -0.14
CBX3-201ENST00000337620 A0A1B0GVT2 93 aa14.15□□□□□ -0.14
CBX3-201ENST00000337620 MAGEB17A8MXT2 336 aa14.15□□□□□ -0.14
CBX3-201ENST00000337620 ISM1B1AKI9 464 aa14.15□□□□□ -0.14
CBX3-201ENST00000337620 GYG2O15488 501 aa14.15□□□□□ -0.14
CBX3-201ENST00000337620 SH3BGRLO75368 114 aa14.15□□□□□ -0.14
CBX3-201ENST00000337620 DNAJC8O75937 253 aaPredicted RBP14.15□□□□□ -0.14
CBX3-201ENST00000337620 CCR8P51685 355 aa14.15□□□□□ -0.14
CBX3-201ENST00000337620 CORO7P57737 925 aa14.15□□□□□ -0.14
CBX3-201ENST00000337620 PRDX1Q06830 199 aaKnown RBP14.15□□□□□ -0.14
CBX3-201ENST00000337620 RBBP5Q15291 538 aaKnown RBP14.15□□□□□ -0.14
CBX3-201ENST00000337620 TEAD4Q15561 434 aa14.15□□□□□ -0.14
CBX3-201ENST00000337620 SF1Q15637 639 aaKnown RBP14.15□□□□□ -0.14
CBX3-201ENST00000337620 PMS2CLQ68D20 193 aa14.15□□□□□ -0.14
CBX3-201ENST00000337620 ADCK2Q7Z695 626 aa14.15□□□□□ -0.14
CBX3-201ENST00000337620 KRT78Q8N1N4 520 aa14.15□□□□□ -0.14
CBX3-201ENST00000337620 DTWD2Q8NBA8 298 aa14.15□□□□□ -0.14
CBX3-201ENST00000337620 FBXO27Q8NI29 283 aa14.15□□□□□ -0.14
CBX3-201ENST00000337620 BTBD10Q9BSF8 475 aa14.15□□□□□ -0.14
CBX3-201ENST00000337620 PELI2Q9HAT8 420 aa14.15□□□□□ -0.14
CBX3-201ENST00000337620 SDR39U1Q9NRG7 319 aaPredicted RBP14.15□□□□□ -0.14
CBX3-201ENST00000337620 POT1Q9NUX5 634 aa14.15□□□□□ -0.14
CBX3-201ENST00000337620 TAS2R1Q9NYW7 299 aa14.15□□□□□ -0.14
CBX3-201ENST00000337620 NOP53Q9NZM5 478 aaKnown RBP14.15□□□□□ -0.14
CBX3-201ENST00000337620 PRDM4Q9UKN5 801 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms