RNA–Protein interactions for RNA: ENST00000334859.8

LRCH3-201, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LRCH3, Length 2,258 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-201ENST00000334859 TMEM215Q68D42 235 aa17.16■□□□□ 0.34
LRCH3-201ENST00000334859 XAF1Q6GPH4 301 aa17.16■□□□□ 0.34
LRCH3-201ENST00000334859 GALNT5Q7Z7M9 940 aa17.16■□□□□ 0.34
LRCH3-201ENST00000334859 SERPINA11Q86U17 422 aa17.16■□□□□ 0.34
LRCH3-201ENST00000334859 GPR65Q8IYL9 337 aa17.16■□□□□ 0.34
LRCH3-201ENST00000334859 CLP1Q92989 425 aaKnown RBP17.16■□□□□ 0.34
LRCH3-201ENST00000334859 POP5Q969H6 163 aaKnown RBP17.16■□□□□ 0.34
LRCH3-201ENST00000334859 MTG2Q9H4K7 406 aa17.16■□□□□ 0.34
LRCH3-201ENST00000334859 PREBQ9HCU5 417 aa17.16■□□□□ 0.34
LRCH3-201ENST00000334859 SPHK2Q9NRA0 654 aa17.16■□□□□ 0.34
LRCH3-201ENST00000334859 TMEM9Q9P0T7 183 aa17.16■□□□□ 0.34
LRCH3-201ENST00000334859 ERVW-1Q9UQF0 538 aa17.16■□□□□ 0.34
LRCH3-201ENST00000334859 MAGEB17A8MXT2 336 aa17.16■□□□□ 0.34
LRCH3-201ENST00000334859 MYO1GB0I1T2 1018 aa17.16■□□□□ 0.34
LRCH3-201ENST00000334859 WASH3PC4AMC7 463 aa17.16■□□□□ 0.34
LRCH3-201ENST00000334859 NPIPB8E9PQR5 432 aa17.16■□□□□ 0.34
LRCH3-201ENST00000334859 RFPL2O75678 378 aa17.16■□□□□ 0.34
LRCH3-201ENST00000334859 SLCO2B1O94956 709 aa17.16■□□□□ 0.34
LRCH3-201ENST00000334859 HOXB6P17509 224 aaKnown RBP17.16■□□□□ 0.34
LRCH3-201ENST00000334859 POLR2EP19388 210 aaKnown RBP17.16■□□□□ 0.34
LRCH3-201ENST00000334859 AGXTP21549 392 aa17.16■□□□□ 0.34
LRCH3-201ENST00000334859 IGFBP5P24593 272 aa17.16■□□□□ 0.34
LRCH3-201ENST00000334859 TRPC1P48995 793 aa17.16■□□□□ 0.34
LRCH3-201ENST00000334859 DCDC1P59894 354 aa17.16■□□□□ 0.34
LRCH3-201ENST00000334859 IL1RL1Q01638 556 aa17.16■□□□□ 0.34
LRCH3-201ENST00000334859 DOC2AQ14183 400 aa17.16■□□□□ 0.34
LRCH3-201ENST00000334859 CLECL1Q8IZS7 167 aa17.16■□□□□ 0.34
LRCH3-201ENST00000334859 KLHL23Q8NBE8 558 aa17.16■□□□□ 0.34
LRCH3-201ENST00000334859 DDHD1Q8NEL9 900 aa17.16■□□□□ 0.34
LRCH3-201ENST00000334859 CCDC138Q96M89 665 aa17.16■□□□□ 0.34
LRCH3-201ENST00000334859 HHIPQ96QV1 700 aa17.16■□□□□ 0.34
LRCH3-201ENST00000334859 ZSCAN5AQ9BUG6 496 aa17.16■□□□□ 0.34
LRCH3-201ENST00000334859 LHPPQ9H008 270 aa17.16■□□□□ 0.34
LRCH3-201ENST00000334859 TDP1Q9NUW8 608 aa17.16■□□□□ 0.34
LRCH3-201ENST00000334859 ABCG2Q9UNQ0 655 aa17.16■□□□□ 0.34
LRCH3-201ENST00000334859 A0A0J9YVX5 310 aa17.15■□□□□ 0.34
LRCH3-201ENST00000334859 BCKDKO14874 412 aa17.15■□□□□ 0.34
LRCH3-201ENST00000334859 ITGB8P26012 769 aa17.15■□□□□ 0.34
LRCH3-201ENST00000334859 PBLDP30039 288 aaPredicted RBP17.15■□□□□ 0.34
LRCH3-201ENST00000334859 BDKRB1P46663 353 aa17.15■□□□□ 0.34
LRCH3-201ENST00000334859 VEGFBP49765 207 aa17.15■□□□□ 0.34
LRCH3-201ENST00000334859 CTSCP53634 463 aa17.15■□□□□ 0.34
LRCH3-201ENST00000334859 SRSF11Q05519 484 aaKnown RBP17.15■□□□□ 0.34
LRCH3-201ENST00000334859 PIGFQ07326 219 aa17.15■□□□□ 0.34
LRCH3-201ENST00000334859 KCNC3Q14003 757 aa17.15■□□□□ 0.34
LRCH3-201ENST00000334859 C16orf72Q14CZ0 275 aa17.15■□□□□ 0.34
LRCH3-201ENST00000334859 CCSMST1Q4G0I0 132 aa17.15■□□□□ 0.34
LRCH3-201ENST00000334859 HENMT1Q5T8I9 393 aaKnown RBP17.15■□□□□ 0.34
LRCH3-201ENST00000334859 AGTRAPQ6RW13 159 aa17.15■□□□□ 0.34
LRCH3-201ENST00000334859 OTOP2Q7RTS6 562 aa17.15■□□□□ 0.34
LRCH3-201ENST00000334859 DCP2Q8IU60 420 aaKnown RBP17.15■□□□□ 0.34
LRCH3-201ENST00000334859 SPARTQ8N0X7 666 aa17.15■□□□□ 0.34
LRCH3-201ENST00000334859 TRAM1L1Q8N609 369 aa17.15■□□□□ 0.34
LRCH3-201ENST00000334859 LILRA3Q8N6C8 439 aaPredicted RBP17.15■□□□□ 0.34
LRCH3-201ENST00000334859 SNX19Q92543 992 aa17.15■□□□□ 0.34
LRCH3-201ENST00000334859 DPH2Q9BQC3 489 aaPredicted RBP17.15■□□□□ 0.34
LRCH3-201ENST00000334859 TMEFF2Q9UIK5 374 aaPredicted RBP17.15■□□□□ 0.34
LRCH3-201ENST00000334859 PLXNA2O75051 1894 aa17.15■□□□□ 0.34
LRCH3-201ENST00000334859 hCG_2039718K7EN88 272 aa17.14■□□□□ 0.33
LRCH3-201ENST00000334859 UGDHO60701 494 aa17.14■□□□□ 0.33
LRCH3-201ENST00000334859 MITFO75030 526 aaPredicted RBP17.14■□□□□ 0.33
LRCH3-201ENST00000334859 SEC14L2O76054 403 aa17.14■□□□□ 0.33
LRCH3-201ENST00000334859 PCSK2P16519 638 aa17.14■□□□□ 0.33
LRCH3-201ENST00000334859 JUNBP17275 347 aaPredicted RBP17.14■□□□□ 0.33
LRCH3-201ENST00000334859 CCNA2P20248 432 aa17.14■□□□□ 0.33
LRCH3-201ENST00000334859 CD247P20963 164 aa17.14■□□□□ 0.33
LRCH3-201ENST00000334859 TMED1Q13445 227 aa17.14■□□□□ 0.33
LRCH3-201ENST00000334859 VMACQ2NL98 169 aa17.14■□□□□ 0.33
LRCH3-201ENST00000334859 RFX4Q33E94 735 aa17.14■□□□□ 0.33
LRCH3-201ENST00000334859 CPZQ66K79 652 aa17.14■□□□□ 0.33
LRCH3-201ENST00000334859 ADNP2Q6IQ32 1131 aa17.14■□□□□ 0.33
LRCH3-201ENST00000334859 SHQ1Q6PI26 577 aaKnown RBP17.14■□□□□ 0.33
LRCH3-201ENST00000334859 SH3KBP1Q96B97 665 aa17.14■□□□□ 0.33
LRCH3-201ENST00000334859 TCF25Q9BQ70 676 aa17.14■□□□□ 0.33
LRCH3-201ENST00000334859 PLGRKTQ9HBL7 147 aa17.14■□□□□ 0.33
LRCH3-201ENST00000334859 STOX2Q9P2F5 926 aaPredicted RBP17.14■□□□□ 0.33
LRCH3-201ENST00000334859 WARS2Q9UGM6 360 aaKnown RBP17.14■□□□□ 0.33
LRCH3-201ENST00000334859 WNT6Q9Y6F9 365 aa17.14■□□□□ 0.33
LRCH3-201ENST00000334859 PRMT3O60678 531 aa17.14■□□□□ 0.33
LRCH3-201ENST00000334859 MYO1DO94832 1006 aa17.14■□□□□ 0.33
LRCH3-201ENST00000334859 CATP04040 527 aaKnown RBP17.14■□□□□ 0.33
LRCH3-201ENST00000334859 CYP4B1P13584 511 aa17.14■□□□□ 0.33
LRCH3-201ENST00000334859 TIMP2P16035 220 aa17.14■□□□□ 0.33
LRCH3-201ENST00000334859 GSTM2P28161 218 aa17.14■□□□□ 0.33
LRCH3-201ENST00000334859 NNMTP40261 264 aa17.14■□□□□ 0.33
LRCH3-201ENST00000334859 MAGEA2P43356 314 aa17.14■□□□□ 0.33
LRCH3-201ENST00000334859 DMC1Q14565 340 aa17.14■□□□□ 0.33
LRCH3-201ENST00000334859 ZNF691Q5VV52 312 aa17.14■□□□□ 0.33
LRCH3-201ENST00000334859 ZNF366Q8N895 744 aa17.14■□□□□ 0.33
LRCH3-201ENST00000334859 WDR20Q8TBZ3 569 aa17.14■□□□□ 0.33
LRCH3-201ENST00000334859 ATL1Q8WXF7 558 aa17.14■□□□□ 0.33
LRCH3-201ENST00000334859 TIFAQ96CG3 184 aa17.14■□□□□ 0.33
LRCH3-201ENST00000334859 MAGED4Q96JG8 741 aa17.14■□□□□ 0.33
LRCH3-201ENST00000334859 CNDP2Q96KP4 475 aaKnown RBP17.14■□□□□ 0.33
LRCH3-201ENST00000334859 FCRL1Q96LA6 429 aa17.14■□□□□ 0.33
LRCH3-201ENST00000334859 DGCR6LQ9BY27 220 aa17.14■□□□□ 0.33
LRCH3-201ENST00000334859 RIBC2Q9H4K1 309 aa17.14■□□□□ 0.33
LRCH3-201ENST00000334859 SGK2Q9HBY8 427 aa17.14■□□□□ 0.33
LRCH3-201ENST00000334859 FAM120CQ9NX05 1096 aaKnown RBP17.14■□□□□ 0.33
LRCH3-201ENST00000334859 GALNT8Q9NY28 637 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms