RNA–Protein interactions for RNA: ENST00000334352.8

USP16-201, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP16, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-201ENST00000334352 RNASEH2BQ5TBB1 312 aaKnown RBP6.07□□□□□ -1.44
USP16-201ENST00000334352 PTRHD1Q6GMV3 140 aaKnown RBP6.07□□□□□ -1.44
USP16-201ENST00000334352 NEPROQ6NW34 567 aa6.07□□□□□ -1.44
USP16-201ENST00000334352 QSOX2Q6ZRP7 698 aa6.07□□□□□ -1.44
USP16-201ENST00000334352 PPIL6Q8IXY8 311 aa6.07□□□□□ -1.44
USP16-201ENST00000334352 CLDN19Q8N6F1 224 aa6.07□□□□□ -1.44
USP16-201ENST00000334352 DNAAF3Q8N9W5 541 aa6.07□□□□□ -1.44
USP16-201ENST00000334352 PKP4Q99569 1192 aa6.07□□□□□ -1.44
USP16-201ENST00000334352 SLC39A10Q9ULF5 831 aa6.07□□□□□ -1.44
USP16-201ENST00000334352 PCDHGB3Q9Y5G1 929 aa6.07□□□□□ -1.44
USP16-201ENST00000334352 SHANK1Q9Y566 2161 aa6.07□□□□□ -1.44
USP16-201ENST00000334352 ISM1B1AKI9 464 aa6.07□□□□□ -1.44
USP16-201ENST00000334352 E7ENX8 843 aa6.07□□□□□ -1.44
USP16-201ENST00000334352 E7EVH7 732 aa6.07□□□□□ -1.44
USP16-201ENST00000334352 BUD23O43709 281 aaKnown RBP6.07□□□□□ -1.44
USP16-201ENST00000334352 PRAMEF2O60811 474 aa6.07□□□□□ -1.44
USP16-201ENST00000334352 ACPPP15309 386 aa6.07□□□□□ -1.44
USP16-201ENST00000334352 HPDP32754 393 aaPredicted RBP6.07□□□□□ -1.44
USP16-201ENST00000334352 CASP2P42575 452 aa6.07□□□□□ -1.44
USP16-201ENST00000334352 AVPR1BP47901 424 aa6.07□□□□□ -1.44
USP16-201ENST00000334352 TAP2Q03519 686 aa6.07□□□□□ -1.44
USP16-201ENST00000334352 DHX9Q08211 1270 aaKnown RBP6.07□□□□□ -1.44
USP16-201ENST00000334352 Q0VFX4 171 aa6.07□□□□□ -1.44
USP16-201ENST00000334352 WASHC2DQ5SRD0 308 aa6.07□□□□□ -1.44
USP16-201ENST00000334352 FAM199XQ6PEV8 388 aaPredicted RBP6.07□□□□□ -1.44
USP16-201ENST00000334352 LRRC8AQ8IWT6 810 aa6.07□□□□□ -1.44
USP16-201ENST00000334352 TCAIMQ8N3R3 496 aa6.07□□□□□ -1.44
USP16-201ENST00000334352 CAMKVQ8NCB2 501 aa6.07□□□□□ -1.44
USP16-201ENST00000334352 OR8K3Q8NH51 312 aa6.07□□□□□ -1.44
USP16-201ENST00000334352 CD200R1Q8TD46 325 aa6.07□□□□□ -1.44
USP16-201ENST00000334352 FAR1Q8WVX9 515 aa6.07□□□□□ -1.44
USP16-201ENST00000334352 SPOCK3Q9BQ16 436 aa6.07□□□□□ -1.44
USP16-201ENST00000334352 FUT8Q9BYC5 575 aa6.07□□□□□ -1.44
USP16-201ENST00000334352 RUBCNLQ9H714 662 aa6.07□□□□□ -1.44
USP16-201ENST00000334352 MRPS30Q9NP92 439 aaKnown RBP6.07□□□□□ -1.44
USP16-201ENST00000334352 CHRAC1Q9NRG0 131 aa6.07□□□□□ -1.44
USP16-201ENST00000334352 SYBUQ9NX95 663 aa6.07□□□□□ -1.44
USP16-201ENST00000334352 PLAAQ9Y263 795 aa6.07□□□□□ -1.44
USP16-201ENST00000334352 COPG1Q9Y678 874 aaKnown RBP6.07□□□□□ -1.44
USP16-201ENST00000334352 APC2O95996 2303 aa6.07□□□□□ -1.44
USP16-201ENST00000334352 UNC13CQ8NB66 2214 aa6.07□□□□□ -1.44
USP16-201ENST00000334352 PIKFYVEQ9Y2I7 2098 aa6.07□□□□□ -1.44
USP16-201ENST00000334352 IGKV3D-11A0A0A0MRZ8 115 aa6.07□□□□□ -1.44
USP16-201ENST00000334352 MAGEB17A8MXT2 336 aa6.07□□□□□ -1.44
USP16-201ENST00000334352 HCRTR1O43613 425 aa6.07□□□□□ -1.44
USP16-201ENST00000334352 SCELO95171 688 aa6.07□□□□□ -1.44
USP16-201ENST00000334352 FTCDO95954 541 aa6.07□□□□□ -1.44
USP16-201ENST00000334352 TPH1P17752 444 aa6.07□□□□□ -1.44
USP16-201ENST00000334352 TFEBP19484 476 aa6.07□□□□□ -1.44
USP16-201ENST00000334352 RPA3P35244 121 aaPredicted RBP6.07□□□□□ -1.44
USP16-201ENST00000334352 LMAN1P49257 510 aa6.07□□□□□ -1.44
USP16-201ENST00000334352 HNMTP50135 292 aa6.07□□□□□ -1.44
USP16-201ENST00000334352 TNFSF10P50591 281 aa6.07□□□□□ -1.44
USP16-201ENST00000334352 CCL11P51671 97 aa6.07□□□□□ -1.44
USP16-201ENST00000334352 RPS18P62269 152 aaKnown RBP6.07□□□□□ -1.44
USP16-201ENST00000334352 REEP5Q00765 189 aa6.07□□□□□ -1.44
USP16-201ENST00000334352 RHAGQ02094 409 aa6.07□□□□□ -1.44
USP16-201ENST00000334352 MORF4L2Q15014 288 aa6.07□□□□□ -1.44
USP16-201ENST00000334352 HYAL4Q2M3T9 481 aa6.07□□□□□ -1.44
USP16-201ENST00000334352 ZNF549Q6P9A3 640 aa6.07□□□□□ -1.44
USP16-201ENST00000334352 PTRH1Q86Y79 214 aaKnown RBP6.07□□□□□ -1.44
USP16-201ENST00000334352 BCORP1Q8N888 145 aa6.07□□□□□ -1.44
USP16-201ENST00000334352 TTLQ8NG68 377 aa6.07□□□□□ -1.44
USP16-201ENST00000334352 MIEF2Q96C03 454 aa6.07□□□□□ -1.44
USP16-201ENST00000334352 SNRNP40Q96DI7 357 aaKnown RBP6.07□□□□□ -1.44
USP16-201ENST00000334352 C14orf79Q96F83 325 aa6.07□□□□□ -1.44
USP16-201ENST00000334352 PPM1MQ96MI6 270 aa6.07□□□□□ -1.44
USP16-201ENST00000334352 MIPEPQ99797 713 aa6.07□□□□□ -1.44
USP16-201ENST00000334352 APOL2Q9BQE5 337 aa6.07□□□□□ -1.44
USP16-201ENST00000334352 C10orf88Q9H8K7 445 aa6.07□□□□□ -1.44
USP16-201ENST00000334352 PARVBQ9HBI1 364 aa6.07□□□□□ -1.44
USP16-201ENST00000334352 PLSCR2Q9NRY7 297 aa6.07□□□□□ -1.44
USP16-201ENST00000334352 PLEKHB1Q9UF11 243 aaPredicted RBP6.07□□□□□ -1.44
USP16-201ENST00000334352 H0YGG7 62 aa6.06□□□□□ -1.44
USP16-201ENST00000334352 DNALI1O14645 258 aaPredicted RBP6.06□□□□□ -1.44
USP16-201ENST00000334352 PRR35P0CG20 571 aa6.06□□□□□ -1.44
USP16-201ENST00000334352 PRSS56P0CW18 603 aa6.06□□□□□ -1.44
USP16-201ENST00000334352 GNLYP22749 145 aa6.06□□□□□ -1.44
USP16-201ENST00000334352 ARF3P61204 181 aaPredicted RBP6.06□□□□□ -1.44
USP16-201ENST00000334352 TMPRSS15P98073 1019 aa6.06□□□□□ -1.44
USP16-201ENST00000334352 HERC3Q15034 1050 aa6.06□□□□□ -1.44
USP16-201ENST00000334352 IGFBP7Q16270 282 aa6.06□□□□□ -1.44
USP16-201ENST00000334352 RBBP7Q16576 425 aa6.06□□□□□ -1.44
USP16-201ENST00000334352 RGS9BPQ6ZS82 235 aa6.06□□□□□ -1.44
USP16-201ENST00000334352 OTOAQ7RTW8 1153 aa6.06□□□□□ -1.44
USP16-201ENST00000334352 SIAH3Q8IW03 269 aa6.06□□□□□ -1.44
USP16-201ENST00000334352 EID3Q8N140 333 aa6.06□□□□□ -1.44
USP16-201ENST00000334352 ZNF808Q8N4W9 903 aaPredicted RBP6.06□□□□□ -1.44
USP16-201ENST00000334352 ELP5Q8TE02 316 aa6.06□□□□□ -1.44
USP16-201ENST00000334352 UBTD2Q8WUN7 234 aa6.06□□□□□ -1.44
USP16-201ENST00000334352 ZNF480Q8WV37 535 aa6.06□□□□□ -1.44
USP16-201ENST00000334352 TFR2Q9UP52 801 aa6.06□□□□□ -1.44
USP16-201ENST00000334352 CFAP20Q9Y6A4 193 aaKnown RBP6.06□□□□□ -1.44
USP16-201ENST00000334352 CACNA1GO43497 2377 aa6.06□□□□□ -1.44
USP16-201ENST00000334352 BAHCC1Q9P281 2608 aa6.06□□□□□ -1.44
USP16-201ENST00000334352 TCP11X1B4DZS4 312 aa6.06□□□□□ -1.44
USP16-201ENST00000334352 KRT14P02533 472 aa6.06□□□□□ -1.44
USP16-201ENST00000334352 MAGP20916 626 aa6.06□□□□□ -1.44
USP16-201ENST00000334352 IVDP26440 423 aa6.06□□□□□ -1.44
USP16-201ENST00000334352 EIF3BP55884 814 aaKnown RBP6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms