RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 PCM1Q15154 2024 aa15.9■□□□□ 0.14
SHOX-201ENST00000334060 OR4F21O95013 312 aa15.9■□□□□ 0.14
SHOX-201ENST00000334060 ST6GAL1P15907 406 aa15.9■□□□□ 0.14
SHOX-201ENST00000334060 ACADVLP49748 655 aa15.9■□□□□ 0.14
SHOX-201ENST00000334060 PDX1P52945 283 aa15.9■□□□□ 0.14
SHOX-201ENST00000334060 DNAJB13P59910 316 aa15.9■□□□□ 0.14
SHOX-201ENST00000334060 NR1D2Q14995 579 aa15.9■□□□□ 0.14
SHOX-201ENST00000334060 DEFB110Q30KQ9 67 aa15.9■□□□□ 0.14
SHOX-201ENST00000334060 CAPN13Q6MZZ7 669 aaPredicted RBP15.9■□□□□ 0.14
SHOX-201ENST00000334060 SHISA5Q8N114 240 aa15.9■□□□□ 0.14
SHOX-201ENST00000334060 ZNF781Q8N8C0 355 aa15.9■□□□□ 0.14
SHOX-201ENST00000334060 OR2L3Q8NG85 312 aa15.9■□□□□ 0.14
SHOX-201ENST00000334060 SMPDL3AQ92484 453 aa15.9■□□□□ 0.14
SHOX-201ENST00000334060 FAM60AQ9NP50 221 aa15.9■□□□□ 0.14
SHOX-201ENST00000334060 DNAJC11Q9NVH1 559 aa15.9■□□□□ 0.14
SHOX-201ENST00000334060 OR6C2Q9NZP2 312 aa15.9■□□□□ 0.14
SHOX-201ENST00000334060 PCNX2A6NKB5 2137 aa15.9■□□□□ 0.14
SHOX-201ENST00000334060 IGHV5-51A0A0C4DH38 117 aa15.89■□□□□ 0.13
SHOX-201ENST00000334060 PMS2P1A4D2B8 440 aa15.89■□□□□ 0.13
SHOX-201ENST00000334060 FFAR3O14843 346 aa15.89■□□□□ 0.13
SHOX-201ENST00000334060 GPR42O15529 346 aa15.89■□□□□ 0.13
SHOX-201ENST00000334060 MDH1P40925 334 aaKnown RBP15.89■□□□□ 0.13
SHOX-201ENST00000334060 HNMTP50135 292 aa15.89■□□□□ 0.13
SHOX-201ENST00000334060 HTR6P50406 440 aa15.89■□□□□ 0.13
SHOX-201ENST00000334060 ACTN3Q08043 901 aaPredicted RBP15.89■□□□□ 0.13
SHOX-201ENST00000334060 KCNAB1Q14722 419 aa15.89■□□□□ 0.13
SHOX-201ENST00000334060 SF1Q15637 639 aaKnown RBP15.89■□□□□ 0.13
SHOX-201ENST00000334060 PDK4Q16654 411 aa15.89■□□□□ 0.13
SHOX-201ENST00000334060 SCIMPQ6UWF3 145 aa15.89■□□□□ 0.13
SHOX-201ENST00000334060 OR4F6Q8NGB9 312 aa15.89■□□□□ 0.13
SHOX-201ENST00000334060 HMGCLL1Q8TB92 370 aa15.89■□□□□ 0.13
SHOX-201ENST00000334060 DYDC1Q8WWB3 177 aa15.89■□□□□ 0.13
SHOX-201ENST00000334060 C1QTNF3Q9BXJ4 246 aa15.89■□□□□ 0.13
SHOX-201ENST00000334060 SEMA6CQ9H3T2 930 aa15.89■□□□□ 0.13
SHOX-201ENST00000334060 MANSC1Q9H8J5 431 aa15.89■□□□□ 0.13
SHOX-201ENST00000334060 FARSBQ9NSD9 589 aaKnown RBP15.89■□□□□ 0.13
SHOX-201ENST00000334060 PNPOQ9NVS9 261 aa15.89■□□□□ 0.13
SHOX-201ENST00000334060 ZDHHC2Q9UIJ5 367 aa15.89■□□□□ 0.13
SHOX-201ENST00000334060 HEATR5BQ9P2D3 2071 aa15.89■□□□□ 0.13
SHOX-201ENST00000334060 PABPN1LA6NDY0 278 aaKnown RBP15.89■□□□□ 0.13
SHOX-201ENST00000334060 BIRC5O15392 142 aa15.89■□□□□ 0.13
SHOX-201ENST00000334060 HYAL3O43820 417 aaPredicted RBP15.89■□□□□ 0.13
SHOX-201ENST00000334060 SH3BGRLO75368 114 aa15.89■□□□□ 0.13
SHOX-201ENST00000334060 NEFHP12036 1026 aa15.89■□□□□ 0.13
SHOX-201ENST00000334060 CKMT2P17540 419 aa15.89■□□□□ 0.13
SHOX-201ENST00000334060 SEC24CP53992 1094 aa15.89■□□□□ 0.13
SHOX-201ENST00000334060 CDC16Q13042 620 aa15.89■□□□□ 0.13
SHOX-201ENST00000334060 SUZ12Q15022 739 aaKnown RBP15.89■□□□□ 0.13
SHOX-201ENST00000334060 RBBP7Q16576 425 aa15.89■□□□□ 0.13
SHOX-201ENST00000334060 FCRL6Q6DN72 434 aa15.89■□□□□ 0.13
SHOX-201ENST00000334060 SPESP1Q6UW49 350 aa15.89■□□□□ 0.13
SHOX-201ENST00000334060 SLCO6A1Q86UG4 719 aa15.89■□□□□ 0.13
SHOX-201ENST00000334060 MYLK4Q86YV6 388 aaPredicted RBP15.89■□□□□ 0.13
SHOX-201ENST00000334060 SLC22A9Q8IVM8 553 aa15.89■□□□□ 0.13
SHOX-201ENST00000334060 POMT2Q9UKY4 750 aa15.89■□□□□ 0.13
SHOX-201ENST00000334060 COL5A1P20908 1838 aaPredicted RBP15.88■□□□□ 0.13
SHOX-201ENST00000334060 FREM2Q5SZK8 3169 aa15.88■□□□□ 0.13
SHOX-201ENST00000334060 TCP11X1B4DZS4 312 aa15.88■□□□□ 0.13
SHOX-201ENST00000334060 HAT1O14929 419 aa15.88■□□□□ 0.13
SHOX-201ENST00000334060 LCMT2O60294 686 aaKnown RBP15.88■□□□□ 0.13
SHOX-201ENST00000334060 CTSVO60911 334 aa15.88■□□□□ 0.13
SHOX-201ENST00000334060 SERPINE1P05121 402 aa15.88■□□□□ 0.13
SHOX-201ENST00000334060 KITP10721 976 aa15.88■□□□□ 0.13
SHOX-201ENST00000334060 EZRP15311 586 aaKnown RBP15.88■□□□□ 0.13
SHOX-201ENST00000334060 ARL1P40616 181 aaPredicted RBP15.88■□□□□ 0.13
SHOX-201ENST00000334060 SEPHS1P49903 392 aa15.88■□□□□ 0.13
SHOX-201ENST00000334060 NEK2P51955 445 aa15.88■□□□□ 0.13
SHOX-201ENST00000334060 IRX1P78414 480 aaPredicted RBP15.88■□□□□ 0.13
SHOX-201ENST00000334060 CHIT1Q13231 466 aa15.88■□□□□ 0.13
SHOX-201ENST00000334060 SLC14A1Q13336 389 aa15.88■□□□□ 0.13
SHOX-201ENST00000334060 DOC2AQ14183 400 aa15.88■□□□□ 0.13
SHOX-201ENST00000334060 ARHGAP19Q14CB8 494 aa15.88■□□□□ 0.13
SHOX-201ENST00000334060 SLCO4C1Q6ZQN7 724 aa15.88■□□□□ 0.13
SHOX-201ENST00000334060 OOSP2Q86WS3 158 aa15.88■□□□□ 0.13
SHOX-201ENST00000334060 AVL9Q8NBF6 648 aa15.88■□□□□ 0.13
SHOX-201ENST00000334060 PPP1R14CQ8TAE6 165 aa15.88■□□□□ 0.13
SHOX-201ENST00000334060 AGAP11Q8TF27 550 aa15.88■□□□□ 0.13
SHOX-201ENST00000334060 PPP1R36Q96LQ0 422 aa15.88■□□□□ 0.13
SHOX-201ENST00000334060 DPH7Q9BTV6 452 aa15.88■□□□□ 0.13
SHOX-201ENST00000334060 STN1Q9H668 368 aaKnown RBP15.88■□□□□ 0.13
SHOX-201ENST00000334060 MID1IP1Q9NPA3 183 aa15.88■□□□□ 0.13
SHOX-201ENST00000334060 SPTBN2O15020 2390 aa15.88■□□□□ 0.13
SHOX-201ENST00000334060 SLC9B1P1A6NJY1 282 aa15.87■□□□□ 0.13
SHOX-201ENST00000334060 SNNO75324 88 aaPredicted RBP15.87■□□□□ 0.13
SHOX-201ENST00000334060 SLC1A6P48664 564 aa15.87■□□□□ 0.13
SHOX-201ENST00000334060 ABCE1P61221 599 aaKnown RBP15.87■□□□□ 0.13
SHOX-201ENST00000334060 OCRLQ01968 901 aa15.87■□□□□ 0.13
SHOX-201ENST00000334060 RCN2Q14257 317 aa15.87■□□□□ 0.13
SHOX-201ENST00000334060 CFAP157Q5JU67 520 aa15.87■□□□□ 0.13
SHOX-201ENST00000334060 FBXW10Q5XX13 1052 aa15.87■□□□□ 0.13
SHOX-201ENST00000334060 CGB2Q6NT52 195 aa15.87■□□□□ 0.13
SHOX-201ENST00000334060 LCTLQ6UWM7 567 aa15.87■□□□□ 0.13
SHOX-201ENST00000334060 LRRC70Q7Z2Q7 622 aa15.87■□□□□ 0.13
SHOX-201ENST00000334060 CUZD1Q86UP6 607 aa15.87■□□□□ 0.13
SHOX-201ENST00000334060 KLHDC8AQ8IYD2 350 aa15.87■□□□□ 0.13
SHOX-201ENST00000334060 DTWD1Q8N5C7 304 aa15.87■□□□□ 0.13
SHOX-201ENST00000334060 CDYL2Q8N8U2 506 aa15.87■□□□□ 0.13
SHOX-201ENST00000334060 PPP4R1Q8TF05 950 aa15.87■□□□□ 0.13
SHOX-201ENST00000334060 ATL1Q8WXF7 558 aa15.87■□□□□ 0.13
SHOX-201ENST00000334060 MIEF2Q96C03 454 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms