RNA–Protein interactions for RNA: ENST00000331789.9

ACTB-201, Transcript of actin beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTB, Length 1,917 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-201ENST00000331789 KIAA1324Q6UXG2 1013 aaKnown RBP17.27■□□□□ 0.36
ACTB-201ENST00000331789 OR2T34Q8NGX1 318 aa17.27■□□□□ 0.36
ACTB-201ENST00000331789 OR5K2Q8NHB8 316 aa17.27■□□□□ 0.36
ACTB-201ENST00000331789 SLC5A11Q8WWX8 675 aa17.27■□□□□ 0.36
ACTB-201ENST00000331789 WDR34Q96EX3 536 aa17.27■□□□□ 0.36
ACTB-201ENST00000331789 MRGPRX1Q96LB2 322 aa17.27■□□□□ 0.36
ACTB-201ENST00000331789 SPNS1Q9H2V7 528 aa17.27■□□□□ 0.36
ACTB-201ENST00000331789 OSGEPL1Q9H4B0 414 aa17.27■□□□□ 0.36
ACTB-201ENST00000331789 PREBQ9HCU5 417 aa17.27■□□□□ 0.36
ACTB-201ENST00000331789 VAPAQ9P0L0 249 aa17.27■□□□□ 0.36
ACTB-201ENST00000331789 KCNK6Q9Y257 313 aa17.27■□□□□ 0.36
ACTB-201ENST00000331789 NCKAP1Q9Y2A7 1128 aa17.27■□□□□ 0.36
ACTB-201ENST00000331789 C15orf38-AP3S2A0A0A6YYH1 394 aa17.27■□□□□ 0.35
ACTB-201ENST00000331789 KANSL1LA0AUZ9 987 aa17.27■□□□□ 0.35
ACTB-201ENST00000331789 SCAMP1O15126 338 aa17.27■□□□□ 0.35
ACTB-201ENST00000331789 AKAP10O43572 662 aa17.27■□□□□ 0.35
ACTB-201ENST00000331789 B3GALT4O96024 378 aa17.27■□□□□ 0.35
ACTB-201ENST00000331789 SLC35G4P0C7Q5 338 aa17.27■□□□□ 0.35
ACTB-201ENST00000331789 MTHFD1P11586 935 aaKnown RBP17.27■□□□□ 0.35
ACTB-201ENST00000331789 NCK1P16333 377 aa17.27■□□□□ 0.35
ACTB-201ENST00000331789 POU3F3P20264 500 aaPredicted RBP17.27■□□□□ 0.35
ACTB-201ENST00000331789 S100A3P33764 101 aa17.27■□□□□ 0.35
ACTB-201ENST00000331789 CLNS1AP54105 237 aaKnown RBP17.27■□□□□ 0.35
ACTB-201ENST00000331789 RPS13P62277 151 aaKnown RBP17.27■□□□□ 0.35
ACTB-201ENST00000331789 PGS1Q32NB8 556 aa17.27■□□□□ 0.35
ACTB-201ENST00000331789 OGFRL1Q5TC84 451 aaPredicted RBP17.27■□□□□ 0.35
ACTB-201ENST00000331789 NXPE4Q6UWF7 544 aa17.27■□□□□ 0.35
ACTB-201ENST00000331789 ARPINQ7Z6K5 226 aa17.27■□□□□ 0.35
ACTB-201ENST00000331789 RIMKLAQ8IXN7 391 aa17.27■□□□□ 0.35
ACTB-201ENST00000331789 FAM110BQ8TC76 370 aa17.27■□□□□ 0.35
ACTB-201ENST00000331789 SETD7Q8WTS6 366 aaKnown RBP17.27■□□□□ 0.35
ACTB-201ENST00000331789 DUS3LQ96G46 650 aaKnown RBP17.27■□□□□ 0.35
ACTB-201ENST00000331789 C1QTNF7Q9BXJ2 289 aa17.27■□□□□ 0.35
ACTB-201ENST00000331789 BRF2Q9HAW0 419 aa17.27■□□□□ 0.35
ACTB-201ENST00000331789 ACTR3BQ9P1U1 418 aa17.27■□□□□ 0.35
ACTB-201ENST00000331789 FZD4Q9ULV1 537 aa17.27■□□□□ 0.35
ACTB-201ENST00000331789 SCML1Q9UN30 329 aa17.27■□□□□ 0.35
ACTB-201ENST00000331789 SLC17A4Q9Y2C5 497 aa17.27■□□□□ 0.35
ACTB-201ENST00000331789 SHISA7A6NL88 538 aa17.26■□□□□ 0.35
ACTB-201ENST00000331789 PI15O43692 258 aa17.26■□□□□ 0.35
ACTB-201ENST00000331789 HSD3B1P14060 373 aa17.26■□□□□ 0.35
ACTB-201ENST00000331789 ACPPP15309 386 aa17.26■□□□□ 0.35
ACTB-201ENST00000331789 CD72P21854 359 aa17.26■□□□□ 0.35
ACTB-201ENST00000331789 HSD3B2P26439 372 aa17.26■□□□□ 0.35
ACTB-201ENST00000331789 SLC7A1P30825 629 aa17.26■□□□□ 0.35
ACTB-201ENST00000331789 OR4D2P58180 307 aa17.26■□□□□ 0.35
ACTB-201ENST00000331789 TMEM31Q5JXX7 168 aa17.26■□□□□ 0.35
ACTB-201ENST00000331789 PRAMEF14Q5SWL7 426 aa17.26■□□□□ 0.35
ACTB-201ENST00000331789 PRAMEF13Q5VWM6 474 aa17.26■□□□□ 0.35
ACTB-201ENST00000331789 CAPRIN2Q6IMN6 1127 aaKnown RBP17.26■□□□□ 0.35
ACTB-201ENST00000331789 LCN8Q6JVE9 175 aa17.26■□□□□ 0.35
ACTB-201ENST00000331789 DNAJC14Q6Y2X3 702 aaPredicted RBP17.26■□□□□ 0.35
ACTB-201ENST00000331789 PRR23BQ6ZRT6 265 aa17.26■□□□□ 0.35
ACTB-201ENST00000331789 PDSS2Q86YH6 399 aa17.26■□□□□ 0.35
ACTB-201ENST00000331789 MSRB3Q8IXL7 192 aa17.26■□□□□ 0.35
ACTB-201ENST00000331789 TMEM102Q8N9M5 508 aaPredicted RBP17.26■□□□□ 0.35
ACTB-201ENST00000331789 DNASE1L2Q92874 299 aa17.26■□□□□ 0.35
ACTB-201ENST00000331789 INSM2Q96T92 566 aaPredicted RBP17.26■□□□□ 0.35
ACTB-201ENST00000331789 BTBD1Q9H0C5 482 aa17.26■□□□□ 0.35
ACTB-201ENST00000331789 PRO3102Q9H379 93 aa17.26■□□□□ 0.35
ACTB-201ENST00000331789 ACSL5Q9ULC5 683 aa17.26■□□□□ 0.35
ACTB-201ENST00000331789 SUFUQ9UMX1 484 aa17.26■□□□□ 0.35
ACTB-201ENST00000331789 GPSM3Q9Y4H4 160 aa17.26■□□□□ 0.35
ACTB-201ENST00000331789 ACADMP11310 421 aa17.25■□□□□ 0.35
ACTB-201ENST00000331789 CDH1P12830 882 aa17.25■□□□□ 0.35
ACTB-201ENST00000331789 NDUFV2P19404 249 aa17.25■□□□□ 0.35
ACTB-201ENST00000331789 CLDN2P57739 230 aa17.25■□□□□ 0.35
ACTB-201ENST00000331789 RAE1P78406 368 aaKnown RBP17.25■□□□□ 0.35
ACTB-201ENST00000331789 ACSM2AQ08AH3 577 aa17.25■□□□□ 0.35
ACTB-201ENST00000331789 DMPKQ09013 629 aa17.25■□□□□ 0.35
ACTB-201ENST00000331789 GRAMD1BQ3KR37 738 aa17.25■□□□□ 0.35
ACTB-201ENST00000331789 GTDC1Q4AE62 458 aa17.25■□□□□ 0.35
ACTB-201ENST00000331789 PYCR3Q53H96 274 aa17.25■□□□□ 0.35
ACTB-201ENST00000331789 ACSM2BQ68CK6 577 aa17.25■□□□□ 0.35
ACTB-201ENST00000331789 USP30Q70CQ3 517 aa17.25■□□□□ 0.35
ACTB-201ENST00000331789 PTRH1Q86Y79 214 aaKnown RBP17.25■□□□□ 0.35
ACTB-201ENST00000331789 SYT12Q8IV01 421 aa17.25■□□□□ 0.35
ACTB-201ENST00000331789 FAM9CQ8IZT9 166 aa17.25■□□□□ 0.35
ACTB-201ENST00000331789 C1orf52Q8N6N3 182 aaKnown RBP17.25■□□□□ 0.35
ACTB-201ENST00000331789 CANT1Q8WVQ1 401 aa17.25■□□□□ 0.35
ACTB-201ENST00000331789 FERD3LQ96RJ6 166 aa17.25■□□□□ 0.35
ACTB-201ENST00000331789 EFCAB11Q9BUY7 163 aa17.25■□□□□ 0.35
ACTB-201ENST00000331789 ACAT2Q9BWD1 397 aa17.25■□□□□ 0.35
ACTB-201ENST00000331789 VCX3BQ9H321 246 aa17.25■□□□□ 0.35
ACTB-201ENST00000331789 TRIT1Q9H3H1 467 aaKnown RBP17.25■□□□□ 0.35
ACTB-201ENST00000331789 SLC6A13Q9NSD5 602 aa17.25■□□□□ 0.35
ACTB-201ENST00000331789 SLC25A37Q9NYZ2 338 aa17.25■□□□□ 0.35
ACTB-201ENST00000331789 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.25■□□□□ 0.35
ACTB-201ENST00000331789 RUVBL1Q9Y265 456 aaKnown RBP17.25■□□□□ 0.35
ACTB-201ENST00000331789 CA5BQ9Y2D0 317 aa17.25■□□□□ 0.35
ACTB-201ENST00000331789 PIPSLA2A3N6 862 aa17.25■□□□□ 0.35
ACTB-201ENST00000331789 POM121BA6NF01 834 aa17.25■□□□□ 0.35
ACTB-201ENST00000331789 AQP12BA6NM10 295 aa17.25■□□□□ 0.35
ACTB-201ENST00000331789 RPN2P04844 631 aa17.25■□□□□ 0.35
ACTB-201ENST00000331789 ACSL1P33121 698 aa17.25■□□□□ 0.35
ACTB-201ENST00000331789 AQP4P55087 323 aa17.25■□□□□ 0.35
ACTB-201ENST00000331789 HIST2H2ACQ16777 129 aaPredicted RBP17.25■□□□□ 0.35
ACTB-201ENST00000331789 HIST2H2AA3Q6FI13 130 aa17.25■□□□□ 0.35
ACTB-201ENST00000331789 LCTLQ6UWM7 567 aa17.25■□□□□ 0.35
ACTB-201ENST00000331789 ANKRD46Q86W74 232 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms