RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 ITM2BQ9Y287 266 aa14.11□□□□□ -0.15
TPM3-206ENST00000330188 PRRC2BQ5JSZ5 2229 aaKnown RBP14.1□□□□□ -0.15
TPM3-206ENST00000330188 SOBPA7XYQ1 873 aa14.1□□□□□ -0.15
TPM3-206ENST00000330188 H0YIV9 168 aa14.1□□□□□ -0.15
TPM3-206ENST00000330188 FPGTO14772 594 aa14.1□□□□□ -0.15
TPM3-206ENST00000330188 NPC1O15118 1278 aa14.1□□□□□ -0.15
TPM3-206ENST00000330188 B4GAT1O43505 415 aa14.1□□□□□ -0.15
TPM3-206ENST00000330188 CATP04040 527 aaKnown RBP14.1□□□□□ -0.15
TPM3-206ENST00000330188 ELFN1P0C7U0 828 aa14.1□□□□□ -0.15
TPM3-206ENST00000330188 CDK4P11802 303 aa14.1□□□□□ -0.15
TPM3-206ENST00000330188 HOXB6P17509 224 aaKnown RBP14.1□□□□□ -0.15
TPM3-206ENST00000330188 IMPA1P29218 277 aa14.1□□□□□ -0.15
TPM3-206ENST00000330188 PIGAP37287 484 aa14.1□□□□□ -0.15
TPM3-206ENST00000330188 DCTP40126 519 aa14.1□□□□□ -0.15
TPM3-206ENST00000330188 VAC14Q08AM6 782 aa14.1□□□□□ -0.15
TPM3-206ENST00000330188 TMEM115Q12893 351 aaPredicted RBP14.1□□□□□ -0.15
TPM3-206ENST00000330188 DDX39BQ13838 428 aaKnown RBP14.1□□□□□ -0.15
TPM3-206ENST00000330188 GRIN2CQ14957 1233 aa14.1□□□□□ -0.15
TPM3-206ENST00000330188 CHPFQ8IZ52 775 aa14.1□□□□□ -0.15
TPM3-206ENST00000330188 C8orf59Q8N0T1 100 aaPredicted RBP14.1□□□□□ -0.15
TPM3-206ENST00000330188 EID3Q8N140 333 aa14.1□□□□□ -0.15
TPM3-206ENST00000330188 HCAR2Q8TDS4 363 aa14.1□□□□□ -0.15
TPM3-206ENST00000330188 POF1BQ8WVV4 589 aa14.1□□□□□ -0.15
TPM3-206ENST00000330188 C12orf43Q96C57 262 aaKnown RBP14.1□□□□□ -0.15
TPM3-206ENST00000330188 AP2M1Q96CW1 435 aa14.1□□□□□ -0.15
TPM3-206ENST00000330188 C11orf24Q96F05 449 aaPredicted RBP14.1□□□□□ -0.15
TPM3-206ENST00000330188 LRIG1Q96JA1 1093 aa14.1□□□□□ -0.15
TPM3-206ENST00000330188 ING2Q9H160 280 aa14.1□□□□□ -0.15
TPM3-206ENST00000330188 LTB4R2Q9NPC1 389 aa14.1□□□□□ -0.15
TPM3-206ENST00000330188 RUVBL1Q9Y265 456 aaKnown RBP14.1□□□□□ -0.15
TPM3-206ENST00000330188 LRRK1Q38SD2 2015 aa14.1□□□□□ -0.15
TPM3-206ENST00000330188 EVPLLA8MZ36 301 aa14.09□□□□□ -0.15
TPM3-206ENST00000330188 CLIC1O00299 241 aa14.09□□□□□ -0.15
TPM3-206ENST00000330188 CCNDBP1O95273 360 aa14.09□□□□□ -0.15
TPM3-206ENST00000330188 CPNE6O95741 557 aa14.09□□□□□ -0.15
TPM3-206ENST00000330188 SRPRAP08240 638 aaKnown RBP14.09□□□□□ -0.15
TPM3-206ENST00000330188 CISD3P0C7P0 127 aa14.09□□□□□ -0.15
TPM3-206ENST00000330188 COX7A2P14406 83 aa14.09□□□□□ -0.15
TPM3-206ENST00000330188 EPCAMP16422 314 aa14.09□□□□□ -0.15
TPM3-206ENST00000330188 TTKP33981 857 aa14.09□□□□□ -0.15
TPM3-206ENST00000330188 CTNNB1P35222 781 aa14.09□□□□□ -0.15
TPM3-206ENST00000330188 POLR2IP36954 125 aaKnown RBP14.09□□□□□ -0.15
TPM3-206ENST00000330188 HNF4AP41235 474 aa14.09□□□□□ -0.15
TPM3-206ENST00000330188 MAGEA2P43356 314 aa14.09□□□□□ -0.15
TPM3-206ENST00000330188 VASPP50552 380 aaPredicted RBP14.09□□□□□ -0.15
TPM3-206ENST00000330188 C21orf58P58505 322 aa14.09□□□□□ -0.15
TPM3-206ENST00000330188 PCDH1Q08174 1060 aa14.09□□□□□ -0.15
TPM3-206ENST00000330188 ACOX1Q15067 660 aa14.09□□□□□ -0.15
TPM3-206ENST00000330188 DHCR24Q15392 516 aa14.09□□□□□ -0.15
TPM3-206ENST00000330188 SF1Q15637 639 aaKnown RBP14.09□□□□□ -0.15
TPM3-206ENST00000330188 ZNF773Q6PK81 442 aa14.09□□□□□ -0.15
TPM3-206ENST00000330188 TMEM220Q6QAJ8 160 aa14.09□□□□□ -0.15
TPM3-206ENST00000330188 EP400NLQ6ZTU2 488 aa14.09□□□□□ -0.15
TPM3-206ENST00000330188 RTL10Q7L3V2 364 aa14.09□□□□□ -0.15
TPM3-206ENST00000330188 GPR155Q7Z3F1 870 aa14.09□□□□□ -0.15
TPM3-206ENST00000330188 OR8J2Q8NGG1 315 aa14.09□□□□□ -0.15
TPM3-206ENST00000330188 OR10Q1Q8NGQ4 319 aa14.09□□□□□ -0.15
TPM3-206ENST00000330188 OR56A3Q8NH54 315 aa14.09□□□□□ -0.15
TPM3-206ENST00000330188 ING5Q8WYH8 240 aa14.09□□□□□ -0.15
TPM3-206ENST00000330188 DTNBP1Q96EV8 351 aa14.09□□□□□ -0.15
TPM3-206ENST00000330188 PANX1Q96RD7 426 aa14.09□□□□□ -0.15
TPM3-206ENST00000330188 PKP4Q99569 1192 aa14.09□□□□□ -0.15
TPM3-206ENST00000330188 ERVK-11Q9UQG0 969 aa14.09□□□□□ -0.15
TPM3-206ENST00000330188 HEMK1Q9Y5R4 338 aaPredicted RBP14.09□□□□□ -0.15
TPM3-206ENST00000330188 YY2O15391 372 aa14.09□□□□□ -0.15
TPM3-206ENST00000330188 ETHE1O95571 254 aa14.09□□□□□ -0.15
TPM3-206ENST00000330188 SLC16A8O95907 504 aa14.09□□□□□ -0.15
TPM3-206ENST00000330188 HSD3B1P14060 373 aa14.09□□□□□ -0.15
TPM3-206ENST00000330188 CEBPBP17676 345 aa14.09□□□□□ -0.15
TPM3-206ENST00000330188 ENGP17813 658 aa14.09□□□□□ -0.15
TPM3-206ENST00000330188 PRKACGP22612 351 aa14.09□□□□□ -0.15
TPM3-206ENST00000330188 HSD3B2P26439 372 aa14.09□□□□□ -0.15
TPM3-206ENST00000330188 DCKP27707 260 aa14.09□□□□□ -0.15
TPM3-206ENST00000330188 PDHA2P29803 388 aa14.09□□□□□ -0.15
TPM3-206ENST00000330188 HOXA9P31269 272 aa14.09□□□□□ -0.15
TPM3-206ENST00000330188 ACSM2AQ08AH3 577 aa14.09□□□□□ -0.15
TPM3-206ENST00000330188 KCNAB2Q13303 367 aa14.09□□□□□ -0.15
TPM3-206ENST00000330188 RBM48Q5RL73 367 aaKnown RBP14.09□□□□□ -0.15
TPM3-206ENST00000330188 ACSM2BQ68CK6 577 aa14.09□□□□□ -0.15
TPM3-206ENST00000330188 ADNP2Q6IQ32 1131 aa14.09□□□□□ -0.15
TPM3-206ENST00000330188 ERAP2Q6P179 960 aa14.09□□□□□ -0.15
TPM3-206ENST00000330188 GRASPQ7Z6J2 395 aaPredicted RBP14.09□□□□□ -0.15
TPM3-206ENST00000330188 ZZZ3Q8IYH5 903 aa14.09□□□□□ -0.15
TPM3-206ENST00000330188 NRSN1Q8IZ57 195 aa14.09□□□□□ -0.15
TPM3-206ENST00000330188 ZNF555Q8NEP9 628 aa14.09□□□□□ -0.15
TPM3-206ENST00000330188 SPPL3Q8TCT6 385 aa14.09□□□□□ -0.15
TPM3-206ENST00000330188 LRRC3BQ96PB8 259 aa14.09□□□□□ -0.15
TPM3-206ENST00000330188 DOK1Q99704 481 aa14.09□□□□□ -0.15
TPM3-206ENST00000330188 BRF2Q9HAW0 419 aa14.09□□□□□ -0.15
TPM3-206ENST00000330188 SGK2Q9HBY8 427 aa14.09□□□□□ -0.15
TPM3-206ENST00000330188 AASDHPPTQ9NRN7 309 aa14.09□□□□□ -0.15
TPM3-206ENST00000330188 FAM120CQ9NX05 1096 aaKnown RBP14.09□□□□□ -0.15
TPM3-206ENST00000330188 VNN3Q9NY84 501 aa14.09□□□□□ -0.15
TPM3-206ENST00000330188 CXXC1Q9P0U4 656 aaPredicted RBP14.09□□□□□ -0.15
TPM3-206ENST00000330188 SAMD4AQ9UPU9 718 aaKnown RBP14.09□□□□□ -0.15
TPM3-206ENST00000330188 PCDHGA8Q9Y5G5 932 aa14.09□□□□□ -0.15
TPM3-206ENST00000330188 E2F6O75461 281 aa14.08□□□□□ -0.16
TPM3-206ENST00000330188 CYP17A1P05093 508 aa14.08□□□□□ -0.16
TPM3-206ENST00000330188 IL7RP16871 459 aa14.08□□□□□ -0.16
TPM3-206ENST00000330188 PBLDP30039 288 aaPredicted RBP14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms