RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 PIK3CGP48736 1102 aa12.42□□□□□ -0.42
CCDC60-201ENST00000327554 PGFP49763 221 aa12.42□□□□□ -0.42
CCDC60-201ENST00000327554 GZMKP49863 264 aa12.42□□□□□ -0.42
CCDC60-201ENST00000327554 CDKN1CP49918 316 aaPredicted RBP12.42□□□□□ -0.42
CCDC60-201ENST00000327554 BNC1Q01954 994 aa12.42□□□□□ -0.42
CCDC60-201ENST00000327554 ST3GAL4Q11206 333 aa12.42□□□□□ -0.42
CCDC60-201ENST00000327554 IQCCQ4KMZ1 466 aa12.42□□□□□ -0.42
CCDC60-201ENST00000327554 INO80DQ53TQ3 878 aaPredicted RBP12.42□□□□□ -0.42
CCDC60-201ENST00000327554 OR4F3Q6IEY1 312 aa12.42□□□□□ -0.42
CCDC60-201ENST00000327554 SLC51BQ86UW2 128 aa12.42□□□□□ -0.42
CCDC60-201ENST00000327554 LAX1Q8IWV1 398 aa12.42□□□□□ -0.42
CCDC60-201ENST00000327554 TMEM132CQ8N3T6 1108 aa12.42□□□□□ -0.42
CCDC60-201ENST00000327554 STX19Q8N4C7 294 aa12.42□□□□□ -0.42
CCDC60-201ENST00000327554 GALNT6Q8NCL4 622 aa12.42□□□□□ -0.42
CCDC60-201ENST00000327554 DNAJB8Q8NHS0 232 aa12.42□□□□□ -0.42
CCDC60-201ENST00000327554 CRELD1Q96HD1 420 aa12.42□□□□□ -0.42
CCDC60-201ENST00000327554 OR5M11Q96RB7 305 aa12.42□□□□□ -0.42
CCDC60-201ENST00000327554 SLC22A4Q9H015 551 aa12.42□□□□□ -0.42
CCDC60-201ENST00000327554 FARSBQ9NSD9 589 aaKnown RBP12.42□□□□□ -0.42
CCDC60-201ENST00000327554 ZNF226Q9NYT6 803 aa12.42□□□□□ -0.42
CCDC60-201ENST00000327554 NUDT4Q9NZJ9 180 aa12.42□□□□□ -0.42
CCDC60-201ENST00000327554 RIMKLBQ9ULI2 386 aa12.42□□□□□ -0.42
CCDC60-201ENST00000327554 SNX7Q9UNH6 387 aa12.42□□□□□ -0.42
CCDC60-201ENST00000327554 ITM2BQ9Y287 266 aa12.42□□□□□ -0.42
CCDC60-201ENST00000327554 CCDC182A6NF36 153 aa12.41□□□□□ -0.42
CCDC60-201ENST00000327554 PLK4O00444 970 aa12.41□□□□□ -0.42
CCDC60-201ENST00000327554 RGS5O15539 181 aa12.41□□□□□ -0.42
CCDC60-201ENST00000327554 RGS14O43566 566 aa12.41□□□□□ -0.42
CCDC60-201ENST00000327554 VPS26AO75436 327 aa12.41□□□□□ -0.42
CCDC60-201ENST00000327554 NDUFS3O75489 264 aa12.41□□□□□ -0.42
CCDC60-201ENST00000327554 GABRB1P18505 474 aa12.41□□□□□ -0.42
CCDC60-201ENST00000327554 POLR2CP19387 275 aaPredicted RBP12.41□□□□□ -0.42
CCDC60-201ENST00000327554 HLA-DPA1P20036 260 aa12.41□□□□□ -0.42
CCDC60-201ENST00000327554 PXNP49023 591 aaPredicted RBP12.41□□□□□ -0.42
CCDC60-201ENST00000327554 IL2P60568 153 aa12.41□□□□□ -0.42
CCDC60-201ENST00000327554 MAD2L1Q13257 205 aaPredicted RBP12.41□□□□□ -0.42
CCDC60-201ENST00000327554 TNK1Q13470 666 aa12.41□□□□□ -0.42
CCDC60-201ENST00000327554 TSTQ16762 297 aaKnown RBP12.41□□□□□ -0.42
CCDC60-201ENST00000327554 TTLL9Q3SXZ7 439 aa12.41□□□□□ -0.42
CCDC60-201ENST00000327554 UBXN11Q5T124 520 aa12.41□□□□□ -0.42
CCDC60-201ENST00000327554 CACHD1Q5VU97 1274 aa12.41□□□□□ -0.42
CCDC60-201ENST00000327554 TMPRSS11AQ6ZMR5 421 aa12.41□□□□□ -0.42
CCDC60-201ENST00000327554 DPY19L3Q6ZPD9 716 aa12.41□□□□□ -0.42
CCDC60-201ENST00000327554 ZNF367Q7RTV3 350 aa12.41□□□□□ -0.42
CCDC60-201ENST00000327554 NLRP8Q86W28 1048 aa12.41□□□□□ -0.42
CCDC60-201ENST00000327554 ANKRD46Q86W74 232 aa12.41□□□□□ -0.42
CCDC60-201ENST00000327554 VWA5B2Q8N398 1253 aa12.41□□□□□ -0.42
CCDC60-201ENST00000327554 OR10T2Q8NGX3 314 aa12.41□□□□□ -0.42
CCDC60-201ENST00000327554 DEDD2Q8WXF8 326 aa12.41□□□□□ -0.42
CCDC60-201ENST00000327554 HSH2DQ96JZ2 352 aa12.41□□□□□ -0.42
CCDC60-201ENST00000327554 IPPKQ9H8X2 491 aa12.41□□□□□ -0.42
CCDC60-201ENST00000327554 TIGARQ9NQ88 270 aa12.41□□□□□ -0.42
CCDC60-201ENST00000327554 DIABLOQ9NR28 239 aa12.41□□□□□ -0.42
CCDC60-201ENST00000327554 ABCB8Q9NUT2 735 aa12.41□□□□□ -0.42
CCDC60-201ENST00000327554 NLE1Q9NVX2 485 aaPredicted RBP12.41□□□□□ -0.42
CCDC60-201ENST00000327554 ASIC5Q9NY37 505 aa12.41□□□□□ -0.42
CCDC60-201ENST00000327554 FNIP2Q9P278 1114 aa12.41□□□□□ -0.42
CCDC60-201ENST00000327554 TRMT6Q9UJA5 497 aaKnown RBP12.41□□□□□ -0.42
CCDC60-201ENST00000327554 ALPK3Q96L96 1907 aa12.41□□□□□ -0.42
CCDC60-201ENST00000327554 BRWD3Q6RI45 1802 aa12.41□□□□□ -0.42
CCDC60-201ENST00000327554 SLC35F4A4IF30 521 aa12.4□□□□□ -0.42
CCDC60-201ENST00000327554 LEUTXA8MZ59 168 aa12.4□□□□□ -0.42
CCDC60-201ENST00000327554 PTGESO14684 152 aa12.4□□□□□ -0.42
CCDC60-201ENST00000327554 FFAR3O14843 346 aa12.4□□□□□ -0.42
CCDC60-201ENST00000327554 GPR42O15529 346 aa12.4□□□□□ -0.42
CCDC60-201ENST00000327554 RPS19P39019 145 aaKnown RBP12.4□□□□□ -0.42
CCDC60-201ENST00000327554 IL12RB1P42701 662 aa12.4□□□□□ -0.42
CCDC60-201ENST00000327554 ZNF140P52738 457 aaPredicted RBP12.4□□□□□ -0.42
CCDC60-201ENST00000327554 SSX1Q16384 188 aa12.4□□□□□ -0.42
CCDC60-201ENST00000327554 TRIM60Q495X7 471 aa12.4□□□□□ -0.42
CCDC60-201ENST00000327554 SLC39A12Q504Y0 691 aa12.4□□□□□ -0.42
CCDC60-201ENST00000327554 USP39Q53GS9 565 aaKnown RBP12.4□□□□□ -0.42
CCDC60-201ENST00000327554 ESCO2Q56NI9 601 aa12.4□□□□□ -0.42
CCDC60-201ENST00000327554 CTSL3PQ5NE16 218 aa12.4□□□□□ -0.42
CCDC60-201ENST00000327554 DOK6Q6PKX4 331 aa12.4□□□□□ -0.42
CCDC60-201ENST00000327554 MILR1Q7Z6M3 343 aa12.4□□□□□ -0.42
CCDC60-201ENST00000327554 TRIM48Q8IWZ4 208 aa12.4□□□□□ -0.42
CCDC60-201ENST00000327554 PGBD3Q8N328 593 aa12.4□□□□□ -0.42
CCDC60-201ENST00000327554 YIPF7Q8N8F6 280 aa12.4□□□□□ -0.42
CCDC60-201ENST00000327554 SCAMP5Q8TAC9 235 aa12.4□□□□□ -0.42
CCDC60-201ENST00000327554 WDFY2Q96P53 400 aa12.4□□□□□ -0.42
CCDC60-201ENST00000327554 SEMA3CQ99985 751 aa12.4□□□□□ -0.42
CCDC60-201ENST00000327554 TSEN34Q9BSV6 310 aaKnown RBP12.4□□□□□ -0.42
CCDC60-201ENST00000327554 TTLL2Q9BWV7 592 aa12.4□□□□□ -0.42
CCDC60-201ENST00000327554 C11orf54Q9H0W9 315 aaPredicted RBP12.4□□□□□ -0.42
CCDC60-201ENST00000327554 AASDHPPTQ9NRN7 309 aa12.4□□□□□ -0.42
CCDC60-201ENST00000327554 H3BRB1 525 aa12.4□□□□□ -0.42
CCDC60-201ENST00000327554 HAS3O00219 553 aa12.4□□□□□ -0.42
CCDC60-201ENST00000327554 AKR7A2O43488 359 aa12.4□□□□□ -0.42
CCDC60-201ENST00000327554 OTCP00480 354 aa12.4□□□□□ -0.42
CCDC60-201ENST00000327554 PKMP14618 531 aaKnown RBP12.4□□□□□ -0.42
CCDC60-201ENST00000327554 UQCRC1P31930 480 aa12.4□□□□□ -0.42
CCDC60-201ENST00000327554 GNPDA1P46926 289 aa12.4□□□□□ -0.42
CCDC60-201ENST00000327554 LHX1P48742 406 aa12.4□□□□□ -0.42
CCDC60-201ENST00000327554 PSPHP78330 225 aa12.4□□□□□ -0.42
CCDC60-201ENST00000327554 HOXC5Q00444 222 aa12.4□□□□□ -0.42
CCDC60-201ENST00000327554 SCN1BQ07699 218 aa12.4□□□□□ -0.42
CCDC60-201ENST00000327554 EIF4HQ15056 248 aaKnown RBP12.4□□□□□ -0.42
CCDC60-201ENST00000327554 TIMM50Q3ZCQ8 353 aa12.4□□□□□ -0.42
CCDC60-201ENST00000327554 RGMBQ6NW40 437 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms