RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 PIP5K1BO14986 540 aa9.87□□□□□ -0.83
VIPAS39-201ENST00000327028 GPR42O15529 346 aa9.87□□□□□ -0.83
VIPAS39-201ENST00000327028 NUDT21O43809 227 aaKnown RBP9.87□□□□□ -0.83
VIPAS39-201ENST00000327028 DIAPH2O60879 1101 aa9.87□□□□□ -0.83
VIPAS39-201ENST00000327028 FKBP9O95302 570 aa9.87□□□□□ -0.83
VIPAS39-201ENST00000327028 KRT6AP02538 564 aa9.87□□□□□ -0.83
VIPAS39-201ENST00000327028 KRT6BP04259 564 aa9.87□□□□□ -0.83
VIPAS39-201ENST00000327028 ZNF883P0CG24 379 aa9.87□□□□□ -0.83
VIPAS39-201ENST00000327028 VARSP26640 1264 aaKnown RBP9.87□□□□□ -0.83
VIPAS39-201ENST00000327028 CMPK1P30085 196 aa9.87□□□□□ -0.83
VIPAS39-201ENST00000327028 KRT6CP48668 564 aa9.87□□□□□ -0.83
VIPAS39-201ENST00000327028 HTR6P50406 440 aa9.87□□□□□ -0.83
VIPAS39-201ENST00000327028 EPHA4P54764 986 aa9.87□□□□□ -0.83
VIPAS39-201ENST00000327028 PRDX1Q06830 199 aaKnown RBP9.87□□□□□ -0.83
VIPAS39-201ENST00000327028 LAPTM5Q13571 262 aa9.87□□□□□ -0.83
VIPAS39-201ENST00000327028 ZRSR2Q15696 482 aaKnown RBP9.87□□□□□ -0.83
VIPAS39-201ENST00000327028 SLC9B1Q4ZJI4 515 aa9.87□□□□□ -0.83
VIPAS39-201ENST00000327028 PAGE2BQ5JRK9 111 aa9.87□□□□□ -0.83
VIPAS39-201ENST00000327028 TCHHL1Q5QJ38 904 aaPredicted RBP9.87□□□□□ -0.83
VIPAS39-201ENST00000327028 VWA5B1Q5TIE3 1220 aa9.87□□□□□ -0.83
VIPAS39-201ENST00000327028 TCEAL6Q6IPX3 200 aa9.87□□□□□ -0.83
VIPAS39-201ENST00000327028 KLHL35Q6PF15 583 aa9.87□□□□□ -0.83
VIPAS39-201ENST00000327028 OOSP2Q86WS3 158 aa9.87□□□□□ -0.83
VIPAS39-201ENST00000327028 MINDY1Q8N5J2 469 aa9.87□□□□□ -0.83
VIPAS39-201ENST00000327028 OR2L3Q8NG85 312 aa9.87□□□□□ -0.83
VIPAS39-201ENST00000327028 OR10G6Q8NH81 332 aa9.87□□□□□ -0.83
VIPAS39-201ENST00000327028 TCEAL3Q969E4 200 aa9.87□□□□□ -0.83
VIPAS39-201ENST00000327028 MAELQ96JY0 434 aaKnown RBP9.87□□□□□ -0.83
VIPAS39-201ENST00000327028 PFDN4Q9NQP4 134 aa9.87□□□□□ -0.83
VIPAS39-201ENST00000327028 CUEDC1Q9NWM3 386 aaPredicted RBP9.87□□□□□ -0.83
VIPAS39-201ENST00000327028 ACTR10Q9NZ32 417 aa9.87□□□□□ -0.83
VIPAS39-201ENST00000327028 SNX6Q9UNH7 406 aa9.87□□□□□ -0.83
VIPAS39-201ENST00000327028 BTRCQ9Y297 605 aa9.87□□□□□ -0.83
VIPAS39-201ENST00000327028 RNF215Q9Y6U7 377 aa9.87□□□□□ -0.83
VIPAS39-201ENST00000327028 ARID1BQ8NFD5 2236 aaPredicted RBP9.87□□□□□ -0.83
VIPAS39-201ENST00000327028 OR5K3A6NET4 321 aa9.86□□□□□ -0.83
VIPAS39-201ENST00000327028 RHPN2P1A8MT19 583 aa9.86□□□□□ -0.83
VIPAS39-201ENST00000327028 H0YIV9 168 aa9.86□□□□□ -0.83
VIPAS39-201ENST00000327028 TRIM38O00635 465 aa9.86□□□□□ -0.83
VIPAS39-201ENST00000327028 SDHDO14521 159 aa9.86□□□□□ -0.83
VIPAS39-201ENST00000327028 SNRNP200O75643 2136 aaKnown RBP9.86□□□□□ -0.83
VIPAS39-201ENST00000327028 UGT2B7P16662 529 aa9.86□□□□□ -0.83
VIPAS39-201ENST00000327028 CCR8P51685 355 aa9.86□□□□□ -0.83
VIPAS39-201ENST00000327028 REEP5Q00765 189 aa9.86□□□□□ -0.83
VIPAS39-201ENST00000327028 ZNF33BQ06732 778 aa9.86□□□□□ -0.83
VIPAS39-201ENST00000327028 SLBPQ14493 270 aaKnown RBP eCLIP9.86□□□□□ -0.83
VIPAS39-201ENST00000327028 NR1D2Q14995 579 aa9.86□□□□□ -0.83
VIPAS39-201ENST00000327028 CPSF6Q16630 551 aaKnown RBP eCLIP9.86□□□□□ -0.83
VIPAS39-201ENST00000327028 XKR7Q5GH72 579 aa9.86□□□□□ -0.83
VIPAS39-201ENST00000327028 FAM129CQ86XR2 697 aa9.86□□□□□ -0.83
VIPAS39-201ENST00000327028 DDIASQ8IXT1 998 aa9.86□□□□□ -0.83
VIPAS39-201ENST00000327028 ANKS4BQ8N8V4 417 aa9.86□□□□□ -0.83
VIPAS39-201ENST00000327028 FAM181AQ8N9Y4 354 aa9.86□□□□□ -0.83
VIPAS39-201ENST00000327028 USP7Q93009 1102 aa9.86□□□□□ -0.83
VIPAS39-201ENST00000327028 PRR11Q96HE9 360 aaPredicted RBP9.86□□□□□ -0.83
VIPAS39-201ENST00000327028 OR2A14Q96R47 310 aa9.86□□□□□ -0.83
VIPAS39-201ENST00000327028 SLC38A3Q99624 504 aa9.86□□□□□ -0.83
VIPAS39-201ENST00000327028 EBF4Q9BQW3 602 aa9.86□□□□□ -0.83
VIPAS39-201ENST00000327028 PLCD4Q9BRC7 762 aa9.86□□□□□ -0.83
VIPAS39-201ENST00000327028 TUBB1Q9H4B7 451 aa9.86□□□□□ -0.83
VIPAS39-201ENST00000327028 SLC6A20Q9NP91 592 aa9.86□□□□□ -0.83
VIPAS39-201ENST00000327028 MRPS30Q9NP92 439 aaKnown RBP9.86□□□□□ -0.83
VIPAS39-201ENST00000327028 GEMIN8Q9NWZ8 242 aaKnown RBP9.86□□□□□ -0.83
VIPAS39-201ENST00000327028 GSAPA4D1B5 854 aa9.86□□□□□ -0.83
VIPAS39-201ENST00000327028 UBXN7O94888 489 aa9.86□□□□□ -0.83
VIPAS39-201ENST00000327028 GLB1P16278 677 aa9.86□□□□□ -0.83
VIPAS39-201ENST00000327028 POLR2CP19387 275 aaPredicted RBP9.86□□□□□ -0.83
VIPAS39-201ENST00000327028 HRH2P25021 359 aa9.86□□□□□ -0.83
VIPAS39-201ENST00000327028 YBX1P67809 324 aaKnown RBP9.86□□□□□ -0.83
VIPAS39-201ENST00000327028 IFT88Q13099 833 aa9.86□□□□□ -0.83
VIPAS39-201ENST00000327028 SF1Q15637 639 aaKnown RBP9.86□□□□□ -0.83
VIPAS39-201ENST00000327028 SLC5A12Q1EHB4 618 aa9.86□□□□□ -0.83
VIPAS39-201ENST00000327028 FRG2Q64ET8 278 aa9.86□□□□□ -0.83
VIPAS39-201ENST00000327028 MED27Q6P2C8 311 aa9.86□□□□□ -0.83
VIPAS39-201ENST00000327028 ACAD11Q709F0 780 aa9.86□□□□□ -0.83
VIPAS39-201ENST00000327028 OR4K1Q8NGD4 311 aa9.86□□□□□ -0.83
VIPAS39-201ENST00000327028 ACTRT2Q8TDY3 377 aa9.86□□□□□ -0.83
VIPAS39-201ENST00000327028 RSC1A1Q92681 617 aa9.86□□□□□ -0.83
VIPAS39-201ENST00000327028 REPS1Q96D71 796 aa9.86□□□□□ -0.83
VIPAS39-201ENST00000327028 FRG2BQ96QU4 278 aa9.86□□□□□ -0.83
VIPAS39-201ENST00000327028 AIF1LQ9BQI0 150 aa9.86□□□□□ -0.83
VIPAS39-201ENST00000327028 CCDC28BQ9BUN5 200 aa9.86□□□□□ -0.83
VIPAS39-201ENST00000327028 PITHD1Q9GZP4 211 aaPredicted RBP9.86□□□□□ -0.83
VIPAS39-201ENST00000327028 ELOVL6Q9H5J4 265 aa9.86□□□□□ -0.83
VIPAS39-201ENST00000327028 HRASLS2Q9NWW9 162 aa9.86□□□□□ -0.83
VIPAS39-201ENST00000327028 LRIT1Q9P2V4 623 aa9.86□□□□□ -0.83
VIPAS39-201ENST00000327028 PADI4Q9UM07 663 aa9.86□□□□□ -0.83
VIPAS39-201ENST00000327028 PCDHGB2Q9Y5G2 931 aa9.86□□□□□ -0.83
VIPAS39-201ENST00000327028 PCDHGA11Q9Y5H2 935 aa9.86□□□□□ -0.83
VIPAS39-201ENST00000327028 PTGDR2Q9Y5Y4 395 aa9.86□□□□□ -0.83
VIPAS39-201ENST00000327028 IGKV1-8A0A0C4DH67 115 aa9.86□□□□□ -0.83
VIPAS39-201ENST00000327028 SERTM1A2A2V5 107 aa9.86□□□□□ -0.83
VIPAS39-201ENST00000327028 SIGLEC6O43699 453 aa9.86□□□□□ -0.83
VIPAS39-201ENST00000327028 ULK1O75385 1050 aa9.86□□□□□ -0.83
VIPAS39-201ENST00000327028 PROS1P07225 676 aa9.86□□□□□ -0.83
VIPAS39-201ENST00000327028 CXCR2P25025 360 aa9.86□□□□□ -0.83
VIPAS39-201ENST00000327028 EPHA3P29320 983 aa9.86□□□□□ -0.83
VIPAS39-201ENST00000327028 GPR3P46089 330 aa9.86□□□□□ -0.83
VIPAS39-201ENST00000327028 CAPZBP47756 277 aa9.86□□□□□ -0.83
VIPAS39-201ENST00000327028 ATXN3P54252 364 aaPredicted RBP9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms