RNA–Protein interactions for RNA: ENST00000320017.10

SCAP-202, Transcript of SREBF chaperone, humanhuman

TSL 2

Gene SCAP, Length 3,430 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-202ENST00000320017 USP3Q9Y6I4 520 aa14.6□□□□□ -0.07
SCAP-202ENST00000320017 SHROOM3Q8TF72 1996 aa14.6□□□□□ -0.07
SCAP-202ENST00000320017 ARID2Q68CP9 1835 aa14.6□□□□□ -0.07
SCAP-202ENST00000320017 ELOVL7A1L3X0 281 aa14.6□□□□□ -0.07
SCAP-202ENST00000320017 PSIP1O75475 530 aaKnown RBP14.6□□□□□ -0.07
SCAP-202ENST00000320017 C1QBP02746 253 aa14.6□□□□□ -0.07
SCAP-202ENST00000320017 NPR3P17342 541 aa14.6□□□□□ -0.07
SCAP-202ENST00000320017 JUNDP17535 347 aa14.6□□□□□ -0.07
SCAP-202ENST00000320017 LILRA4P59901 499 aa14.6□□□□□ -0.07
SCAP-202ENST00000320017 RPA4Q13156 261 aa14.6□□□□□ -0.07
SCAP-202ENST00000320017 GPR19Q15760 415 aa14.6□□□□□ -0.07
SCAP-202ENST00000320017 KLHL12Q53G59 568 aa14.6□□□□□ -0.07
SCAP-202ENST00000320017 HECTD2Q5U5R9 776 aa14.6□□□□□ -0.07
SCAP-202ENST00000320017 KIAA0319Q5VV43 1072 aa14.6□□□□□ -0.07
SCAP-202ENST00000320017 ANKRD54Q6NXT1 300 aa14.6□□□□□ -0.07
SCAP-202ENST00000320017 CLEC20AQ6ZU45 233 aa14.6□□□□□ -0.07
SCAP-202ENST00000320017 C19orf18Q8NEA5 215 aa14.6□□□□□ -0.07
SCAP-202ENST00000320017 NLGN4YQ8NFZ3 816 aaPredicted RBP14.6□□□□□ -0.07
SCAP-202ENST00000320017 SCAMP5Q8TAC9 235 aa14.6□□□□□ -0.07
SCAP-202ENST00000320017 IPCEF1Q8WWN9 437 aaPredicted RBP14.6□□□□□ -0.07
SCAP-202ENST00000320017 FCGR1BQ92637 280 aa14.6□□□□□ -0.07
SCAP-202ENST00000320017 PPA2Q9H2U2 334 aa14.6□□□□□ -0.07
SCAP-202ENST00000320017 ZNF222Q9UK12 451 aa14.6□□□□□ -0.07
SCAP-202ENST00000320017 GABRQQ9UN88 632 aa14.6□□□□□ -0.07
SCAP-202ENST00000320017 COMMD10Q9Y6G5 202 aa14.6□□□□□ -0.07
SCAP-202ENST00000320017 TANC1Q9C0D5 1861 aa14.6□□□□□ -0.07
SCAP-202ENST00000320017 TTC3P53804 2025 aa14.6□□□□□ -0.07
SCAP-202ENST00000320017 C17orf102A2RUQ5 167 aa14.59□□□□□ -0.07
SCAP-202ENST00000320017 M0R129 80 aa14.59□□□□□ -0.07
SCAP-202ENST00000320017 PCDHGA12O60330 932 aa14.59□□□□□ -0.07
SCAP-202ENST00000320017 PTHP01270 115 aa14.59□□□□□ -0.07
SCAP-202ENST00000320017 TEKQ02763 1124 aa14.59□□□□□ -0.07
SCAP-202ENST00000320017 RGS1Q08116 209 aa14.59□□□□□ -0.07
SCAP-202ENST00000320017 ZBTB37Q5TC79 503 aa14.59□□□□□ -0.07
SCAP-202ENST00000320017 FAM171BQ6P995 826 aa14.59□□□□□ -0.07
SCAP-202ENST00000320017 LIPIQ6XZB0 460 aa14.59□□□□□ -0.07
SCAP-202ENST00000320017 ZNF431Q8TF32 576 aaPredicted RBP14.59□□□□□ -0.07
SCAP-202ENST00000320017 TSPAN17Q96FV3 270 aa14.59□□□□□ -0.07
SCAP-202ENST00000320017 AIG1Q9NVV5 245 aa14.59□□□□□ -0.07
SCAP-202ENST00000320017 ZNF451Q9Y4E5 1061 aa14.59□□□□□ -0.07
SCAP-202ENST00000320017 FABP12A6NFH5 140 aa14.59□□□□□ -0.07
SCAP-202ENST00000320017 POU1F1P28069 291 aa14.59□□□□□ -0.07
SCAP-202ENST00000320017 SRP54P61011 504 aaKnown RBP14.59□□□□□ -0.07
SCAP-202ENST00000320017 RPP38P78345 283 aaKnown RBP14.59□□□□□ -0.07
SCAP-202ENST00000320017 WSCD2Q2TBF2 565 aa14.59□□□□□ -0.07
SCAP-202ENST00000320017 TRIQKQ629K1 86 aa14.59□□□□□ -0.07
SCAP-202ENST00000320017 PRSS42Q7Z5A4 293 aa14.59□□□□□ -0.07
SCAP-202ENST00000320017 GALNT10Q86SR1 603 aa14.59□□□□□ -0.07
SCAP-202ENST00000320017 SH3RF2Q8TEC5 729 aa14.59□□□□□ -0.07
SCAP-202ENST00000320017 ST8SIA4Q92187 359 aa14.59□□□□□ -0.07
SCAP-202ENST00000320017 TNIP3Q96KP6 325 aa14.59□□□□□ -0.07
SCAP-202ENST00000320017 KCNC2Q96PR1 638 aa14.59□□□□□ -0.07
SCAP-202ENST00000320017 USB1Q9BQ65 265 aaKnown RBP14.59□□□□□ -0.07
SCAP-202ENST00000320017 ASPNQ9BXN1 380 aa14.59□□□□□ -0.07
SCAP-202ENST00000320017 GALNT9Q9HCQ5 603 aa14.59□□□□□ -0.07
SCAP-202ENST00000320017 A3GALT2U3KPV4 340 aa14.59□□□□□ -0.07
SCAP-202ENST00000320017 HTTP42858 3142 aa14.59□□□□□ -0.07
SCAP-202ENST00000320017 PLOD3O60568 738 aa14.59□□□□□ -0.07
SCAP-202ENST00000320017 HMBSP08397 361 aa14.59□□□□□ -0.07
SCAP-202ENST00000320017 PRDX3P30048 256 aaKnown RBP14.59□□□□□ -0.07
SCAP-202ENST00000320017 MAGEA11P43364 429 aa14.59□□□□□ -0.07
SCAP-202ENST00000320017 CYP4F8P98187 520 aa14.59□□□□□ -0.07
SCAP-202ENST00000320017 TMEM81Q6P7N7 255 aa14.59□□□□□ -0.07
SCAP-202ENST00000320017 SLC37A3Q8NCC5 494 aa14.59□□□□□ -0.07
SCAP-202ENST00000320017 POF1BQ8WVV4 589 aa14.59□□□□□ -0.07
SCAP-202ENST00000320017 DNAJA4Q8WW22 397 aaPredicted RBP14.59□□□□□ -0.07
SCAP-202ENST00000320017 MYDGFQ969H8 173 aa14.59□□□□□ -0.07
SCAP-202ENST00000320017 VAPAQ9P0L0 249 aa14.59□□□□□ -0.07
SCAP-202ENST00000320017 UBA6A0AVT1 1052 aaPredicted RBP14.58□□□□□ -0.08
SCAP-202ENST00000320017 WASHC1A8K0Z3 465 aa14.58□□□□□ -0.08
SCAP-202ENST00000320017 THPOP40225 353 aa14.58□□□□□ -0.08
SCAP-202ENST00000320017 KIR2DL3P43628 341 aa14.58□□□□□ -0.08
SCAP-202ENST00000320017 RGS6P49758 472 aa14.58□□□□□ -0.08
SCAP-202ENST00000320017 CPT1AP50416 773 aa14.58□□□□□ -0.08
SCAP-202ENST00000320017 DAPP51397 102 aa14.58□□□□□ -0.08
SCAP-202ENST00000320017 FKBP1BP68106 108 aa14.58□□□□□ -0.08
SCAP-202ENST00000320017 ZNF33BQ06732 778 aa14.58□□□□□ -0.08
SCAP-202ENST00000320017 HYAL2Q12891 473 aa14.58□□□□□ -0.08
SCAP-202ENST00000320017 VEPH1Q14D04 833 aa14.58□□□□□ -0.08
SCAP-202ENST00000320017 COQ5Q5HYK3 327 aa14.58□□□□□ -0.08
SCAP-202ENST00000320017 NADSYN1Q6IA69 706 aa14.58□□□□□ -0.08
SCAP-202ENST00000320017 PHYKPLQ8IUZ5 450 aa14.58□□□□□ -0.08
SCAP-202ENST00000320017 DUSP16Q9BY84 665 aa14.58□□□□□ -0.08
SCAP-202ENST00000320017 NIPAL2Q9H841 368 aa14.58□□□□□ -0.08
SCAP-202ENST00000320017 RBM22Q9NW64 420 aaKnown RBP eCLIP14.58□□□□□ -0.08
SCAP-202ENST00000320017 UBQLN1Q9UMX0 589 aaKnown RBP14.58□□□□□ -0.08
SCAP-202ENST00000320017 SBF1O95248 1867 aa14.58□□□□□ -0.08
SCAP-202ENST00000320017 MANSC4A6NHS7 340 aaPredicted RBP14.58□□□□□ -0.08
SCAP-202ENST00000320017 RRN3P2A6NIE6 340 aa14.58□□□□□ -0.08
SCAP-202ENST00000320017 LZTS3O60299 673 aaPredicted RBP14.58□□□□□ -0.08
SCAP-202ENST00000320017 CD72P21854 359 aa14.58□□□□□ -0.08
SCAP-202ENST00000320017 SSTR2P30874 369 aa14.58□□□□□ -0.08
SCAP-202ENST00000320017 CDH18Q13634 790 aa14.58□□□□□ -0.08
SCAP-202ENST00000320017 NR6A1Q15406 480 aa14.58□□□□□ -0.08
SCAP-202ENST00000320017 AANATQ16613 207 aa14.58□□□□□ -0.08
SCAP-202ENST00000320017 SPATS1Q496A3 300 aa14.58□□□□□ -0.08
SCAP-202ENST00000320017 GTDC1Q4AE62 458 aa14.58□□□□□ -0.08
SCAP-202ENST00000320017 IFNL1Q8IU54 200 aa14.58□□□□□ -0.08
SCAP-202ENST00000320017 TCTE3Q8IZS6 198 aa14.58□□□□□ -0.08
SCAP-202ENST00000320017 ANKRD53Q8N9V6 530 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms