RNA–Protein interactions for RNA: ENST00000316399.10

SOX6-201, Transcript of SRY-box 6, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SOX6, Length 8,808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-201ENST00000316399 SPIN1Q9Y657 262 aaPredicted RBP7.03□□□□□ -1.28
SOX6-201ENST00000316399 TRBC2A0A5B9 178 aa7.03□□□□□ -1.28
SOX6-201ENST00000316399 DAPL1A0PJW8 107 aa7.03□□□□□ -1.28
SOX6-201ENST00000316399 TREHO43280 583 aa7.03□□□□□ -1.28
SOX6-201ENST00000316399 CREG1O75629 220 aa7.03□□□□□ -1.28
SOX6-201ENST00000316399 AHSGP02765 367 aa7.03□□□□□ -1.28
SOX6-201ENST00000316399 DCKP27707 260 aa7.03□□□□□ -1.28
SOX6-201ENST00000316399 AVPR1BP47901 424 aa7.03□□□□□ -1.28
SOX6-201ENST00000316399 XKR4Q5GH76 650 aa7.03□□□□□ -1.28
SOX6-201ENST00000316399 C6orf136Q5SQH8 315 aa7.03□□□□□ -1.28
SOX6-201ENST00000316399 AMZ2Q86W34 360 aa7.03□□□□□ -1.28
SOX6-201ENST00000316399 C12orf43Q96C57 262 aaKnown RBP7.03□□□□□ -1.28
SOX6-201ENST00000316399 TMEM80Q96HE8 168 aa7.03□□□□□ -1.28
SOX6-201ENST00000316399 TNFRSF10DQ9UBN6 386 aa7.03□□□□□ -1.28
SOX6-201ENST00000316399 FBXO10Q9UK96 956 aa7.03□□□□□ -1.28
SOX6-201ENST00000316399 MAP4K5Q9Y4K4 846 aa7.03□□□□□ -1.28
SOX6-201ENST00000316399 OAS3Q9Y6K5 1087 aaKnown RBP7.03□□□□□ -1.28
SOX6-201ENST00000316399 ADAMTSL3P82987 1691 aa7.03□□□□□ -1.28
SOX6-201ENST00000316399 LOC100130705A0A1B0GUX0 176 aa7.03□□□□□ -1.28
SOX6-201ENST00000316399 TLX3O43711 291 aaPredicted RBP7.03□□□□□ -1.28
SOX6-201ENST00000316399 RAB36O95755 333 aa7.03□□□□□ -1.28
SOX6-201ENST00000316399 LSM3P62310 102 aaKnown RBP7.03□□□□□ -1.28
SOX6-201ENST00000316399 EVX2Q03828 476 aa7.03□□□□□ -1.28
SOX6-201ENST00000316399 DUSP4Q13115 394 aa7.03□□□□□ -1.28
SOX6-201ENST00000316399 ADAM15Q13444 863 aa7.03□□□□□ -1.28
SOX6-201ENST00000316399 SYPL2Q5VXT5 272 aa7.03□□□□□ -1.28
SOX6-201ENST00000316399 PSRC1Q6PGN9 363 aaPredicted RBP7.03□□□□□ -1.28
SOX6-201ENST00000316399 PAQR3Q6TCH7 311 aa7.03□□□□□ -1.28
SOX6-201ENST00000316399 GOLGA7Q7Z5G4 137 aa7.03□□□□□ -1.28
SOX6-201ENST00000316399 PHTF2Q8N3S3 785 aa7.03□□□□□ -1.28
SOX6-201ENST00000316399 DENND6BQ8NEG7 585 aa7.03□□□□□ -1.28
SOX6-201ENST00000316399 GSDMCQ9BYG8 508 aa7.03□□□□□ -1.28
SOX6-201ENST00000316399 PCDHB16Q9NRJ7 776 aa7.03□□□□□ -1.28
SOX6-201ENST00000316399 HAPLN1P10915 354 aaPredicted RBP7.03□□□□□ -1.28
SOX6-201ENST00000316399 ATP1B2P14415 290 aaPredicted RBP7.03□□□□□ -1.28
SOX6-201ENST00000316399 GGT1P19440 569 aa7.03□□□□□ -1.28
SOX6-201ENST00000316399 C2orf80Q0P641 193 aa7.03□□□□□ -1.28
SOX6-201ENST00000316399 PCBP2Q15366 365 aaKnown RBP eCLIP7.03□□□□□ -1.283e-7■■□□□ 14.5
SOX6-201ENST00000316399 CRTC2Q53ET0 693 aaPredicted RBP7.03□□□□□ -1.28
SOX6-201ENST00000316399 CHERPQ8IWX8 916 aaKnown RBP7.03□□□□□ -1.28
SOX6-201ENST00000316399 CAMKVQ8NCB2 501 aa7.03□□□□□ -1.28
SOX6-201ENST00000316399 HTRA1Q92743 480 aa7.03□□□□□ -1.28
SOX6-201ENST00000316399 RBM18Q96H35 190 aaKnown RBP7.03□□□□□ -1.28
SOX6-201ENST00000316399 FEM1AQ9BSK4 669 aa7.03□□□□□ -1.28
SOX6-201ENST00000316399 OR2B2Q9GZK3 357 aa7.03□□□□□ -1.28
SOX6-201ENST00000316399 TRIM39Q9HCM9 518 aa7.03□□□□□ -1.28
SOX6-201ENST00000316399 PDLIM7Q9NR12 457 aa7.03□□□□□ -1.28
SOX6-201ENST00000316399 TIMM22Q9Y584 194 aa7.03□□□□□ -1.28
SOX6-201ENST00000316399 ZNF541Q9H0D2 1346 aa7.03□□□□□ -1.28
SOX6-201ENST00000316399 ONECUT3O60422 494 aaPredicted RBP7.03□□□□□ -1.28
SOX6-201ENST00000316399 SLITRK5O94991 958 aa7.03□□□□□ -1.28
SOX6-201ENST00000316399 MT-ND2P03891 347 aa7.03□□□□□ -1.28
SOX6-201ENST00000316399 FGF4P08620 206 aa7.03□□□□□ -1.28
SOX6-201ENST00000316399 AMD1P17707 334 aa7.03□□□□□ -1.28
SOX6-201ENST00000316399 CXCR4P61073 352 aa7.03□□□□□ -1.28
SOX6-201ENST00000316399 SLC10A7Q0GE19 358 aa7.03□□□□□ -1.28
SOX6-201ENST00000316399 TOMM5Q8N4H5 51 aa7.03□□□□□ -1.28
SOX6-201ENST00000316399 ZNF461Q8TAF7 563 aa7.03□□□□□ -1.28
SOX6-201ENST00000316399 TNFAIP8L1Q8WVP5 186 aa7.03□□□□□ -1.28
SOX6-201ENST00000316399 SLC5A11Q8WWX8 675 aa7.03□□□□□ -1.28
SOX6-201ENST00000316399 TMEM184CQ9NVA4 438 aa7.03□□□□□ -1.28
SOX6-201ENST00000316399 FKBP14Q9NWM8 211 aa7.03□□□□□ -1.28
SOX6-201ENST00000316399 RBPJLQ9UBG7 517 aa7.03□□□□□ -1.28
SOX6-201ENST00000316399 YIPF1Q9Y548 306 aa7.03□□□□□ -1.28
SOX6-201ENST00000316399 CXorf49A8MYA2 514 aaPredicted RBP7.03□□□□□ -1.28
SOX6-201ENST00000316399 CCRL2O00421 344 aa7.03□□□□□ -1.28
SOX6-201ENST00000316399 MT-ND5P03915 603 aa7.03□□□□□ -1.28
SOX6-201ENST00000316399 MTPNP58546 118 aa7.03□□□□□ -1.28
SOX6-201ENST00000316399 CDK6Q00534 326 aa7.03□□□□□ -1.28
SOX6-201ENST00000316399 TARDBPQ13148 414 aaKnown RBP eCLIP7.03□□□□□ -1.28
SOX6-201ENST00000316399 PRAMEF14Q5SWL7 426 aa7.03□□□□□ -1.28
SOX6-201ENST00000316399 PRAMEF13Q5VWM6 474 aa7.03□□□□□ -1.28
SOX6-201ENST00000316399 TMEM17Q86X19 198 aa7.03□□□□□ -1.28
SOX6-201ENST00000316399 COX18Q8N8Q8 333 aa7.03□□□□□ -1.28
SOX6-201ENST00000316399 ZBTB8BQ8NAP8 495 aaPredicted RBP7.03□□□□□ -1.28
SOX6-201ENST00000316399 KBTBD7Q8WVZ9 684 aa7.03□□□□□ -1.28
SOX6-201ENST00000316399 CLCC1Q96S66 551 aa7.03□□□□□ -1.28
SOX6-201ENST00000316399 SMOQ99835 787 aa7.03□□□□□ -1.28
SOX6-201ENST00000316399 DOHHQ9BU89 302 aa7.03□□□□□ -1.28
SOX6-201ENST00000316399 IFT27Q9BW83 186 aa7.03□□□□□ -1.28
SOX6-201ENST00000316399 TOR3AQ9H497 397 aa7.03□□□□□ -1.28
SOX6-201ENST00000316399 WDR26Q9H7D7 661 aa7.03□□□□□ -1.28
SOX6-201ENST00000316399 MCUBQ9NWR8 336 aa7.03□□□□□ -1.28
SOX6-201ENST00000316399 SOHLH2Q9NX45 425 aa7.03□□□□□ -1.28
SOX6-201ENST00000316399 UBR2Q8IWV8 1755 aa7.03□□□□□ -1.28
SOX6-201ENST00000316399 ISM1B1AKI9 464 aa7.03□□□□□ -1.28
SOX6-201ENST00000316399 PLOD2O00469 737 aa7.03□□□□□ -1.28
SOX6-201ENST00000316399 CTNNB1P35222 781 aa7.03□□□□□ -1.28
SOX6-201ENST00000316399 HMGCLP35914 325 aa7.03□□□□□ -1.28
SOX6-201ENST00000316399 TPTEP56180 551 aa7.03□□□□□ -1.28
SOX6-201ENST00000316399 PTGR1Q14914 329 aa7.03□□□□□ -1.28
SOX6-201ENST00000316399 TIGD5Q53EQ6 642 aa7.03□□□□□ -1.28
SOX6-201ENST00000316399 C22orf39Q6P5X5 142 aa7.03□□□□□ -1.28
SOX6-201ENST00000316399 ZNF517Q6ZMY9 492 aaPredicted RBP7.03□□□□□ -1.28
SOX6-201ENST00000316399 TSEN15Q8WW01 171 aaKnown RBP7.03□□□□□ -1.28
SOX6-201ENST00000316399 MTFMTQ96DP5 389 aaKnown RBP7.03□□□□□ -1.28
SOX6-201ENST00000316399 EXOC2Q96KP1 924 aa7.03□□□□□ -1.28
SOX6-201ENST00000316399 POLR2J2Q9GZM3 115 aaKnown RBP7.03□□□□□ -1.28
SOX6-201ENST00000316399 GOLGA2P5Q9HBQ8 144 aa7.03□□□□□ -1.28
SOX6-201ENST00000316399 NLGN3Q9NZ94 848 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms