RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 UBTD2Q8WUN7 234 aa13.06□□□□□ -0.32
SKA3-202ENST00000314759 YME1L1Q96TA2 773 aa13.06□□□□□ -0.32
SKA3-202ENST00000314759 KIF17Q9P2E2 1029 aa13.06□□□□□ -0.32
SKA3-202ENST00000314759 N6AMT1Q9Y5N5 214 aa13.06□□□□□ -0.32
SKA3-202ENST00000314759 M0R082 166 aa13.06□□□□□ -0.32
SKA3-202ENST00000314759 AIREO43918 545 aa13.06□□□□□ -0.32
SKA3-202ENST00000314759 CLDN11O75508 207 aa13.06□□□□□ -0.32
SKA3-202ENST00000314759 CLDN9O95484 217 aa13.06□□□□□ -0.32
SKA3-202ENST00000314759 VNN2O95498 520 aa13.06□□□□□ -0.32
SKA3-202ENST00000314759 BMP1P13497 986 aa13.06□□□□□ -0.32
SKA3-202ENST00000314759 ALOX12P18054 663 aa13.06□□□□□ -0.32
SKA3-202ENST00000314759 C21orf33P30042 268 aaPredicted RBP13.06□□□□□ -0.32
SKA3-202ENST00000314759 NPRL3Q12980 569 aa13.06□□□□□ -0.32
SKA3-202ENST00000314759 ARHGEF7Q14155 803 aa13.06□□□□□ -0.32
SKA3-202ENST00000314759 GPRC6AQ5T6X5 926 aa13.06□□□□□ -0.32
SKA3-202ENST00000314759 OR4F3Q6IEY1 312 aa13.06□□□□□ -0.32
SKA3-202ENST00000314759 SERPINA11Q86U17 422 aa13.06□□□□□ -0.32
SKA3-202ENST00000314759 RASAL3Q86YV0 1011 aa13.06□□□□□ -0.32
SKA3-202ENST00000314759 PARP16Q8N5Y8 322 aa13.06□□□□□ -0.32
SKA3-202ENST00000314759 PROX1Q92786 737 aa13.06□□□□□ -0.32
SKA3-202ENST00000314759 BOLA1Q9Y3E2 137 aa13.06□□□□□ -0.32
SKA3-202ENST00000314759 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.05□□□□□ -0.32
SKA3-202ENST00000314759 A0A1W2PQ67 120 aa13.05□□□□□ -0.32
SKA3-202ENST00000314759 NOTOA8MTQ0 251 aa13.05□□□□□ -0.32
SKA3-202ENST00000314759 TMEM189-UBE2V1I3L0A0 370 aa13.05□□□□□ -0.32
SKA3-202ENST00000314759 IDH3BO43837 385 aa13.05□□□□□ -0.32
SKA3-202ENST00000314759 STK16O75716 305 aa13.05□□□□□ -0.32
SKA3-202ENST00000314759 KCNK5O95279 499 aa13.05□□□□□ -0.32
SKA3-202ENST00000314759 KRT6AP02538 564 aa13.05□□□□□ -0.32
SKA3-202ENST00000314759 KRT6BP04259 564 aa13.05□□□□□ -0.32
SKA3-202ENST00000314759 SDC1P18827 310 aa13.05□□□□□ -0.32
SKA3-202ENST00000314759 RPS3P23396 243 aaKnown RBP eCLIP13.05□□□□□ -0.32
SKA3-202ENST00000314759 KRT6CP48668 564 aa13.05□□□□□ -0.32
SKA3-202ENST00000314759 SLC11A2P49281 568 aa13.05□□□□□ -0.32
SKA3-202ENST00000314759 TUBA1BP68363 451 aa13.05□□□□□ -0.32
SKA3-202ENST00000314759 ZNF177Q13360 481 aaPredicted RBP13.05□□□□□ -0.32
SKA3-202ENST00000314759 VMACQ2NL98 169 aa13.05□□□□□ -0.32
SKA3-202ENST00000314759 RNF219Q5W0B1 726 aaPredicted RBP13.05□□□□□ -0.32
SKA3-202ENST00000314759 TUBA1AQ71U36 451 aa13.05□□□□□ -0.32
SKA3-202ENST00000314759 C16orf59Q7L2K0 433 aa13.05□□□□□ -0.32
SKA3-202ENST00000314759 RTN4RL1Q86UN2 441 aaPredicted RBP13.05□□□□□ -0.32
SKA3-202ENST00000314759 HEATR4Q86WZ0 1026 aa13.05□□□□□ -0.32
SKA3-202ENST00000314759 IL17RDQ8NFM7 739 aa13.05□□□□□ -0.32
SKA3-202ENST00000314759 CDK5RAP1Q96SZ6 601 aaKnown RBP13.05□□□□□ -0.32
SKA3-202ENST00000314759 PITX2Q99697 317 aa13.05□□□□□ -0.32
SKA3-202ENST00000314759 ABCG8Q9H221 673 aa13.05□□□□□ -0.32
SKA3-202ENST00000314759 UGT2A1Q9Y4X1 527 aa13.05□□□□□ -0.32
SKA3-202ENST00000314759 MICAL3Q7RTP6 2002 aa13.05□□□□□ -0.32
SKA3-202ENST00000314759 MTMR11A4FU01 709 aa13.05□□□□□ -0.32
SKA3-202ENST00000314759 AP3D1O14617 1153 aa13.05□□□□□ -0.32
SKA3-202ENST00000314759 KLKB1P03952 638 aa13.05□□□□□ -0.32
SKA3-202ENST00000314759 DNTTP04053 509 aa13.05□□□□□ -0.32
SKA3-202ENST00000314759 GADD45AP24522 165 aa13.05□□□□□ -0.32
SKA3-202ENST00000314759 KDELR2P33947 212 aa13.05□□□□□ -0.32
SKA3-202ENST00000314759 UGT2B10P36537 528 aa13.05□□□□□ -0.32
SKA3-202ENST00000314759 FAHD1Q6P587 224 aa13.05□□□□□ -0.32
SKA3-202ENST00000314759 RSPO2Q6UXX9 243 aaPredicted RBP13.05□□□□□ -0.32
SKA3-202ENST00000314759 Q6ZPB1 254 aaPredicted RBP13.05□□□□□ -0.32
SKA3-202ENST00000314759 RBFAQ8N0V3 343 aa13.05□□□□□ -0.32
SKA3-202ENST00000314759 ZBTB2Q8N680 514 aa13.05□□□□□ -0.32
SKA3-202ENST00000314759 SELENOMQ8WWX9 145 aa13.05□□□□□ -0.32
SKA3-202ENST00000314759 TESCQ96BS2 214 aa13.05□□□□□ -0.32
SKA3-202ENST00000314759 SLC29A3Q9BZD2 475 aa13.05□□□□□ -0.32
SKA3-202ENST00000314759 ASB8Q9H765 288 aa13.05□□□□□ -0.32
SKA3-202ENST00000314759 LATS2Q9NRM7 1088 aa13.05□□□□□ -0.32
SKA3-202ENST00000314759 THUMPD1Q9NXG2 353 aaKnown RBP13.05□□□□□ -0.32
SKA3-202ENST00000314759 DNMT3LQ9UJW3 386 aa13.05□□□□□ -0.32
SKA3-202ENST00000314759 PCDHGA6Q9Y5G7 932 aa13.05□□□□□ -0.32
SKA3-202ENST00000314759 A8MV72 311 aaPredicted RBP13.04□□□□□ -0.32
SKA3-202ENST00000314759 EVPLLA8MZ36 301 aa13.04□□□□□ -0.32
SKA3-202ENST00000314759 E9PQ18 207 aa13.04□□□□□ -0.32
SKA3-202ENST00000314759 TAF4O00268 1085 aa13.04□□□□□ -0.32
SKA3-202ENST00000314759 CLIC1O00299 241 aa13.04□□□□□ -0.32
SKA3-202ENST00000314759 DSCR3O14972 297 aa13.04□□□□□ -0.32
SKA3-202ENST00000314759 FZD6O60353 706 aa13.04□□□□□ -0.32
SKA3-202ENST00000314759 FKBP9O95302 570 aa13.04□□□□□ -0.32
SKA3-202ENST00000314759 GJB5O95377 273 aa13.04□□□□□ -0.32
SKA3-202ENST00000314759 IGHA2P01877 340 aa13.04□□□□□ -0.32
SKA3-202ENST00000314759 ATP5C1P36542 298 aaKnown RBP13.04□□□□□ -0.32
SKA3-202ENST00000314759 DUSP4Q13115 394 aa13.04□□□□□ -0.32
SKA3-202ENST00000314759 CAMK2GQ13555 558 aaPredicted RBP13.04□□□□□ -0.32
SKA3-202ENST00000314759 FAM209AQ5JX71 171 aa13.04□□□□□ -0.32
SKA3-202ENST00000314759 C9orf131Q5VYM1 1079 aa13.04□□□□□ -0.32
SKA3-202ENST00000314759 GATAD2AQ86YP4 633 aa13.04□□□□□ -0.32
SKA3-202ENST00000314759 ZZZ3Q8IYH5 903 aa13.04□□□□□ -0.32
SKA3-202ENST00000314759 PGBD3Q8N328 593 aa13.04□□□□□ -0.32
SKA3-202ENST00000314759 HSH2DQ96JZ2 352 aa13.04□□□□□ -0.32
SKA3-202ENST00000314759 DPH2Q9BQC3 489 aaPredicted RBP13.04□□□□□ -0.32
SKA3-202ENST00000314759 COPS4Q9BT78 406 aa13.04□□□□□ -0.32
SKA3-202ENST00000314759 RNF6Q9Y252 685 aa13.04□□□□□ -0.32
SKA3-202ENST00000314759 VWA8A3KMH1 1905 aa13.04□□□□□ -0.32
SKA3-202ENST00000314759 SAGE2PA6NJ88 616 aa13.04□□□□□ -0.32
SKA3-202ENST00000314759 NBNO60934 754 aa13.04□□□□□ -0.32
SKA3-202ENST00000314759 MFN2O95140 757 aa13.04□□□□□ -0.32
SKA3-202ENST00000314759 PRPS2P11908 318 aa13.04□□□□□ -0.32
SKA3-202ENST00000314759 ENGP17813 658 aa13.04□□□□□ -0.32
SKA3-202ENST00000314759 GRK5P34947 590 aa13.04□□□□□ -0.32
SKA3-202ENST00000314759 NFATC2Q13469 925 aa13.04□□□□□ -0.32
SKA3-202ENST00000314759 MRPL58Q14197 206 aaKnown RBP13.04□□□□□ -0.32
SKA3-202ENST00000314759 TPRG1LQ5T0D9 272 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms