RNA–Protein interactions for RNA: ENST00000310397.12

SNED1-201, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SNED1, Length 8,174 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-201ENST00000310397 ALDOAP04075 364 aaKnown RBP12.84□□□□□ -0.35
SNED1-201ENST00000310397 GSTT2P0CG29 244 aa12.84□□□□□ -0.35
SNED1-201ENST00000310397 HTR1EP28566 365 aa12.84□□□□□ -0.35
SNED1-201ENST00000310397 OGDHQ02218 1023 aa12.84□□□□□ -0.35
SNED1-201ENST00000310397 NANOGP8Q6NSW7 305 aa12.84□□□□□ -0.35
SNED1-201ENST00000310397 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.84□□□□□ -0.35
SNED1-201ENST00000310397 ANKFN1Q8N957 763 aa12.84□□□□□ -0.35
SNED1-201ENST00000310397 RHEBL1Q8TAI7 183 aa12.84□□□□□ -0.35
SNED1-201ENST00000310397 LMO3Q8TAP4 145 aa12.84□□□□□ -0.35
SNED1-201ENST00000310397 NANOGQ9H9S0 305 aa12.84□□□□□ -0.35
SNED1-201ENST00000310397 CFAP97Q9P2B7 532 aa12.84□□□□□ -0.35
SNED1-201ENST00000310397 TNFRSF10DQ9UBN6 386 aa12.84□□□□□ -0.35
SNED1-201ENST00000310397 DCLK1O15075 740 aa12.84□□□□□ -0.35
SNED1-201ENST00000310397 STBD1O95210 358 aa12.84□□□□□ -0.35
SNED1-201ENST00000310397 OAS1P00973 400 aaKnown RBP12.84□□□□□ -0.35
SNED1-201ENST00000310397 GIMD1P0DJR0 217 aa12.84□□□□□ -0.35
SNED1-201ENST00000310397 GNG2P59768 71 aa12.84□□□□□ -0.35
SNED1-201ENST00000310397 SYPL2Q5VXT5 272 aa12.84□□□□□ -0.35
SNED1-201ENST00000310397 SLC30A6Q6NXT4 461 aa12.84□□□□□ -0.35
SNED1-201ENST00000310397 CCDC28AQ8IWP9 274 aa12.84□□□□□ -0.35
SNED1-201ENST00000310397 NR4A3Q92570 626 aa12.84□□□□□ -0.35
SNED1-201ENST00000310397 MEAF6Q9HAF1 191 aa12.84□□□□□ -0.35
SNED1-201ENST00000310397 ZDHHC3Q9NYG2 299 aa12.84□□□□□ -0.35
SNED1-201ENST00000310397 MALT1Q9UDY8 824 aa12.84□□□□□ -0.35
SNED1-201ENST00000310397 CLDN4O14493 209 aa12.84□□□□□ -0.35
SNED1-201ENST00000310397 ACVR2AP27037 513 aa12.84□□□□□ -0.35
SNED1-201ENST00000310397 GRK6P43250 576 aa12.84□□□□□ -0.35
SNED1-201ENST00000310397 HMGCS1Q01581 520 aa12.84□□□□□ -0.35
SNED1-201ENST00000310397 MADCAM1Q13477 382 aa12.84□□□□□ -0.35
SNED1-201ENST00000310397 GANABQ14697 944 aaKnown RBP12.84□□□□□ -0.35
SNED1-201ENST00000310397 ZNF678Q5SXM1 525 aa12.84□□□□□ -0.35
SNED1-201ENST00000310397 C10orf62Q5T681 223 aaPredicted RBP12.84□□□□□ -0.35
SNED1-201ENST00000310397 FIBCD1Q8N539 461 aa12.84□□□□□ -0.35
SNED1-201ENST00000310397 MINDY1Q8N5J2 469 aa12.84□□□□□ -0.35
SNED1-201ENST00000310397 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.84□□□□□ -0.35
SNED1-201ENST00000310397 SLC37A3Q8NCC5 494 aa12.84□□□□□ -0.35
SNED1-201ENST00000310397 SIPA1Q96FS4 1042 aa12.84□□□□□ -0.35
SNED1-201ENST00000310397 TMEM80Q96HE8 168 aa12.84□□□□□ -0.35
SNED1-201ENST00000310397 RANBP3Q9H6Z4 567 aaPredicted RBP12.84□□□□□ -0.35
SNED1-201ENST00000310397 A0A0G2JPF8 293 aa12.84□□□□□ -0.35
SNED1-201ENST00000310397 KANTRA0A1W2PQU2 76 aa12.84□□□□□ -0.35
SNED1-201ENST00000310397 HNRNPCL3B7ZW38 293 aa12.84□□□□□ -0.35
SNED1-201ENST00000310397 ITGA10O75578 1167 aa12.84□□□□□ -0.35
SNED1-201ENST00000310397 HNRNPCL4P0DMR1 293 aa12.84□□□□□ -0.35
SNED1-201ENST00000310397 NT5EP21589 574 aa12.84□□□□□ -0.35
SNED1-201ENST00000310397 MAP1SQ66K74 1059 aaPredicted RBP12.84□□□□□ -0.35
SNED1-201ENST00000310397 SLC2A7Q6PXP3 512 aa12.84□□□□□ -0.35
SNED1-201ENST00000310397 HACD2Q6Y1H2 254 aa12.84□□□□□ -0.35
SNED1-201ENST00000310397 OSTF1Q92882 214 aa12.84□□□□□ -0.35
SNED1-201ENST00000310397 CCR8P51685 355 aa12.83□□□□□ -0.35
SNED1-201ENST00000310397 FKBP1BP68106 108 aa12.83□□□□□ -0.35
SNED1-201ENST00000310397 FAM189A2Q15884 450 aa12.83□□□□□ -0.35
SNED1-201ENST00000310397 CTC1Q2NKJ3 1217 aa12.83□□□□□ -0.35
SNED1-201ENST00000310397 CDCA2Q69YH5 1023 aaPredicted RBP12.83□□□□□ -0.35
SNED1-201ENST00000310397 MBOAT1Q6ZNC8 495 aa12.83□□□□□ -0.35
SNED1-201ENST00000310397 IFT27Q9BW83 186 aa12.83□□□□□ -0.35
SNED1-201ENST00000310397 CHIAQ9BZP6 476 aa12.83□□□□□ -0.35
SNED1-201ENST00000310397 MOCS1Q9NZB8 636 aa12.83□□□□□ -0.35
SNED1-201ENST00000310397 NR2E3Q9Y5X4 410 aa12.83□□□□□ -0.35
SNED1-201ENST00000310397 RGPD1P0DJD0 1748 aa12.83□□□□□ -0.35
SNED1-201ENST00000310397 SCN2BO60939 215 aa12.83□□□□□ -0.36
SNED1-201ENST00000310397 CPN2P22792 545 aa12.83□□□□□ -0.36
SNED1-201ENST00000310397 C6orf141Q5SZD1 244 aa12.83□□□□□ -0.36
SNED1-201ENST00000310397 TNFAIP8L2Q6P589 184 aaPredicted RBP12.83□□□□□ -0.36
SNED1-201ENST00000310397 ZNF384Q8TF68 577 aa12.83□□□□□ -0.36
SNED1-201ENST00000310397 MUS81Q96NY9 551 aa12.83□□□□□ -0.36
SNED1-201ENST00000310397 ZNF382Q96SR6 550 aa12.83□□□□□ -0.36
SNED1-201ENST00000310397 SMOC2Q9H3U7 446 aa12.83□□□□□ -0.36
SNED1-201ENST00000310397 MGAT4AQ9UM21 535 aa12.83□□□□□ -0.36
SNED1-201ENST00000310397 HSPB11Q9Y547 144 aa12.83□□□□□ -0.36
SNED1-201ENST00000310397 LRRC37A3O60309 1634 aa12.83□□□□□ -0.36
SNED1-201ENST00000310397 WRBO00258 174 aa12.83□□□□□ -0.36
SNED1-201ENST00000310397 EBLN1P0CF75 366 aa12.83□□□□□ -0.36
SNED1-201ENST00000310397 FAM110CQ1W6H9 321 aa12.83□□□□□ -0.36
SNED1-201ENST00000310397 SDR16C5Q8N3Y7 309 aa12.83□□□□□ -0.36
SNED1-201ENST00000310397 CHST4Q8NCG5 386 aa12.83□□□□□ -0.36
SNED1-201ENST00000310397 STYXL1Q9Y6J8 313 aa12.83□□□□□ -0.36
SNED1-201ENST00000310397 G6PDP11413 515 aa12.83□□□□□ -0.36
SNED1-201ENST00000310397 SLC39A4Q6P5W5 647 aa12.83□□□□□ -0.36
SNED1-201ENST00000310397 ZC3H10Q96K80 434 aaKnown RBP12.83□□□□□ -0.36
SNED1-201ENST00000310397 NDC1Q9BTX1 674 aa12.83□□□□□ -0.36
SNED1-201ENST00000310397 GTPBP2Q9BX10 602 aaKnown RBP12.83□□□□□ -0.36
SNED1-201ENST00000310397 PAK1IP1Q9NWT1 392 aaPredicted RBP12.83□□□□□ -0.36
SNED1-201ENST00000310397 HCN4Q9Y3Q4 1203 aa12.83□□□□□ -0.36
SNED1-201ENST00000310397 TTC3P53804 2025 aa12.83□□□□□ -0.36
SNED1-201ENST00000310397 ZNF541Q9H0D2 1346 aa12.83□□□□□ -0.36
SNED1-201ENST00000310397 ARL6IP5O75915 188 aa12.83□□□□□ -0.36
SNED1-201ENST00000310397 DNASE1L1P49184 302 aa12.83□□□□□ -0.36
SNED1-201ENST00000310397 SERINC3Q13530 473 aa12.83□□□□□ -0.36
SNED1-201ENST00000310397 TOMM20Q15388 145 aa12.83□□□□□ -0.36
SNED1-201ENST00000310397 C4orf46Q504U0 113 aa12.83□□□□□ -0.36
SNED1-201ENST00000310397 COX18Q8N8Q8 333 aa12.83□□□□□ -0.36
SNED1-201ENST00000310397 KAT2AQ92830 837 aa12.83□□□□□ -0.36
SNED1-201ENST00000310397 ESAMQ96AP7 390 aa12.83□□□□□ -0.36
SNED1-201ENST00000310397 RBM7Q9Y580 266 aaKnown RBP12.83□□□□□ -0.36
SNED1-201ENST00000310397 ANKRD66B4E2M5 251 aa12.83□□□□□ -0.36
SNED1-201ENST00000310397 IDSP22304 550 aa12.83□□□□□ -0.36
SNED1-201ENST00000310397 MYLK3Q32MK0 819 aa12.83□□□□□ -0.36
SNED1-201ENST00000310397 PIM3Q86V86 326 aa12.83□□□□□ -0.36
SNED1-201ENST00000310397 CIR1Q86X95 450 aaPredicted RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms