RNA–Protein interactions for RNA: ENST00000309615.7

APTX-201, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,859 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-201ENST00000309615 ZUFSPQ96AP4 578 aa12.38□□□□□ -0.43
APTX-201ENST00000309615 TLCD1Q96CP7 247 aa12.38□□□□□ -0.43
APTX-201ENST00000309615 TCTN2Q96GX1 697 aa12.38□□□□□ -0.43
APTX-201ENST00000309615 SH3GL2Q99962 352 aa12.38□□□□□ -0.43
APTX-201ENST00000309615 PLCD4Q9BRC7 762 aa12.38□□□□□ -0.43
APTX-201ENST00000309615 PDE7BQ9NP56 450 aa12.38□□□□□ -0.43
APTX-201ENST00000309615 SSU72Q9NP77 194 aaKnown RBP12.38□□□□□ -0.43
APTX-201ENST00000309615 ACSS2Q9NR19 701 aa12.38□□□□□ -0.43
APTX-201ENST00000309615 DNAJC11Q9NVH1 559 aa12.38□□□□□ -0.43
APTX-201ENST00000309615 SIDT1Q9NXL6 827 aaKnown RBP12.38□□□□□ -0.43
APTX-201ENST00000309615 AKAP7Q9P0M2 348 aaPredicted RBP12.38□□□□□ -0.43
APTX-201ENST00000309615 OPTCQ9UBM4 332 aa12.38□□□□□ -0.43
APTX-201ENST00000309615 TMCO1Q9UM00 188 aa12.38□□□□□ -0.43
APTX-201ENST00000309615 KCNE2Q9Y6J6 123 aa12.38□□□□□ -0.43
APTX-201ENST00000309615 SNRNP200O75643 2136 aaKnown RBP12.38□□□□□ -0.43
APTX-201ENST00000309615 OR2A25A4D2G3 310 aa12.38□□□□□ -0.43
APTX-201ENST00000309615 STX16-NPEPL1H3BU86 382 aa12.38□□□□□ -0.43
APTX-201ENST00000309615 K7EPI3 171 aa12.38□□□□□ -0.43
APTX-201ENST00000309615 E2F3O00716 465 aa12.38□□□□□ -0.43
APTX-201ENST00000309615 STX16O14662 325 aa12.38□□□□□ -0.43
APTX-201ENST00000309615 CTSVO60911 334 aa12.38□□□□□ -0.43
APTX-201ENST00000309615 MYL2P10916 166 aa12.38□□□□□ -0.43
APTX-201ENST00000309615 EPORP19235 508 aa12.38□□□□□ -0.43
APTX-201ENST00000309615 ATP5F1P24539 256 aaPredicted RBP12.38□□□□□ -0.43
APTX-201ENST00000309615 NFKB2Q00653 900 aa12.38□□□□□ -0.43
APTX-201ENST00000309615 CDC16Q13042 620 aa12.38□□□□□ -0.43
APTX-201ENST00000309615 EIF3IQ13347 325 aaKnown RBP12.38□□□□□ -0.43
APTX-201ENST00000309615 PCBP2Q15366 365 aaKnown RBP eCLIP12.38□□□□□ -0.43
APTX-201ENST00000309615 GPR19Q15760 415 aa12.38□□□□□ -0.43
APTX-201ENST00000309615 PDK4Q16654 411 aa12.38□□□□□ -0.43
APTX-201ENST00000309615 DEFB110Q30KQ9 67 aa12.38□□□□□ -0.43
APTX-201ENST00000309615 CATSPEREQ5SY80 951 aa12.38□□□□□ -0.43
APTX-201ENST00000309615 ZNF425Q6IV72 752 aa12.38□□□□□ -0.43
APTX-201ENST00000309615 ZYG11AQ6WRX3 759 aa12.38□□□□□ -0.43
APTX-201ENST00000309615 RPS27LQ71UM5 84 aaKnown RBP12.38□□□□□ -0.43
APTX-201ENST00000309615 LRRC70Q7Z2Q7 622 aa12.38□□□□□ -0.43
APTX-201ENST00000309615 ADCK2Q7Z695 626 aa12.38□□□□□ -0.43
APTX-201ENST00000309615 SLC5A11Q8WWX8 675 aa12.38□□□□□ -0.43
APTX-201ENST00000309615 MOCOSQ96EN8 888 aa12.38□□□□□ -0.43
APTX-201ENST00000309615 FCRL4Q96PJ5 515 aa12.38□□□□□ -0.43
APTX-201ENST00000309615 DYRK1BQ9Y463 629 aa12.38□□□□□ -0.43
APTX-201ENST00000309615 TNPO3Q9Y5L0 923 aaKnown RBP12.38□□□□□ -0.43
APTX-201ENST00000309615 KIF26BQ2KJY2 2108 aa12.37□□□□□ -0.43
APTX-201ENST00000309615 E7EQ34 232 aa12.37□□□□□ -0.43
APTX-201ENST00000309615 MAP3K7O43318 606 aa12.37□□□□□ -0.43
APTX-201ENST00000309615 JMJD7P0C870 316 aa12.37□□□□□ -0.43
APTX-201ENST00000309615 CPA3P15088 417 aa12.37□□□□□ -0.43
APTX-201ENST00000309615 ETV5P41161 510 aa12.37□□□□□ -0.43
APTX-201ENST00000309615 PRKAA2P54646 552 aa12.37□□□□□ -0.43
APTX-201ENST00000309615 MEF2AQ02078 507 aaPredicted RBP12.37□□□□□ -0.43
APTX-201ENST00000309615 FOXM1Q08050 763 aa12.37□□□□□ -0.43
APTX-201ENST00000309615 MPP2Q14168 576 aa12.37□□□□□ -0.43
APTX-201ENST00000309615 TTMPQ5BVD1 217 aa12.37□□□□□ -0.43
APTX-201ENST00000309615 AGBL2Q5U5Z8 902 aa12.37□□□□□ -0.43
APTX-201ENST00000309615 TMPRSS11BQ86T26 416 aa12.37□□□□□ -0.43
APTX-201ENST00000309615 PAQR7Q86WK9 346 aa12.37□□□□□ -0.43
APTX-201ENST00000309615 TEX9Q8N6V9 391 aa12.37□□□□□ -0.43
APTX-201ENST00000309615 ABHD11Q8NFV4 315 aa12.37□□□□□ -0.43
APTX-201ENST00000309615 RDH11Q8TC12 318 aa12.37□□□□□ -0.43
APTX-201ENST00000309615 PMEPA1Q969W9 287 aa12.37□□□□□ -0.43
APTX-201ENST00000309615 PRR11Q96HE9 360 aaPredicted RBP12.37□□□□□ -0.43
APTX-201ENST00000309615 NSUN5Q96P11 429 aaKnown RBP12.37□□□□□ -0.43
APTX-201ENST00000309615 TMEM237Q96Q45 408 aa12.37□□□□□ -0.43
APTX-201ENST00000309615 OR6C1Q96RD1 312 aa12.37□□□□□ -0.43
APTX-201ENST00000309615 CHRNA10Q9GZZ6 450 aa12.37□□□□□ -0.43
APTX-201ENST00000309615 APMAPQ9HDC9 416 aa12.37□□□□□ -0.43
APTX-201ENST00000309615 KCNK9Q9NPC2 374 aa12.37□□□□□ -0.43
APTX-201ENST00000309615 COPG2Q9UBF2 871 aa12.37□□□□□ -0.43
APTX-201ENST00000309615 PISDQ9UG56 409 aa12.37□□□□□ -0.43
APTX-201ENST00000309615 PILRAQ9UKJ1 303 aa12.37□□□□□ -0.43
APTX-201ENST00000309615 SNX7Q9UNH6 387 aa12.37□□□□□ -0.43
APTX-201ENST00000309615 KNTC1P50748 2209 aa12.36□□□□□ -0.43
APTX-201ENST00000309615 ADAMTS20P59510 1910 aa12.36□□□□□ -0.43
APTX-201ENST00000309615 HAT1O14929 419 aa12.36□□□□□ -0.43
APTX-201ENST00000309615 PRAMEF4O60810 478 aa12.36□□□□□ -0.43
APTX-201ENST00000309615 GNAZP19086 355 aa12.36□□□□□ -0.43
APTX-201ENST00000309615 GABRA4P48169 554 aa12.36□□□□□ -0.43
APTX-201ENST00000309615 CCR8P51685 355 aa12.36□□□□□ -0.43
APTX-201ENST00000309615 MAPK10P53779 464 aa12.36□□□□□ -0.43
APTX-201ENST00000309615 HERVK_113P63132 956 aa12.36□□□□□ -0.43
APTX-201ENST00000309615 GABREP78334 506 aa12.36□□□□□ -0.43
APTX-201ENST00000309615 CSNK1G2P78368 415 aa12.36□□□□□ -0.43
APTX-201ENST00000309615 TUBB3Q13509 450 aa12.36□□□□□ -0.43
APTX-201ENST00000309615 NAA25Q14CX7 972 aa12.36□□□□□ -0.43
APTX-201ENST00000309615 PCLAFQ15004 111 aa12.36□□□□□ -0.43
APTX-201ENST00000309615 TMTC4Q5T4D3 741 aa12.36□□□□□ -0.43
APTX-201ENST00000309615 PRAMEF9Q5VWM5 478 aa12.36□□□□□ -0.43
APTX-201ENST00000309615 FBXO42Q6P3S6 717 aa12.36□□□□□ -0.43
APTX-201ENST00000309615 NXPE4Q6UWF7 544 aa12.36□□□□□ -0.43
APTX-201ENST00000309615 SLCO4C1Q6ZQN7 724 aa12.36□□□□□ -0.43
APTX-201ENST00000309615 GOLGA7Q7Z5G4 137 aa12.36□□□□□ -0.43
APTX-201ENST00000309615 PLD3Q8IV08 490 aa12.36□□□□□ -0.43
APTX-201ENST00000309615 SLC22A9Q8IVM8 553 aa12.36□□□□□ -0.43
APTX-201ENST00000309615 DNAJC22Q8N4W6 341 aa12.36□□□□□ -0.43
APTX-201ENST00000309615 CTRCQ99895 268 aa12.36□□□□□ -0.43
APTX-201ENST00000309615 ERVK-6Q9BXR3 956 aa12.36□□□□□ -0.43
APTX-201ENST00000309615 SYNPO2LQ9H987 977 aa12.36□□□□□ -0.43
APTX-201ENST00000309615 POLR1BQ9H9Y6 1135 aa12.36□□□□□ -0.43
APTX-201ENST00000309615 FGF21Q9NSA1 209 aa12.36□□□□□ -0.43
APTX-201ENST00000309615 TMEM184CQ9NVA4 438 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms