RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 VPS26AO75436 327 aa18.93■□□□□ 0.62
PDZRN3-202ENST00000308537 ALBP02768 609 aa18.93■□□□□ 0.62
PDZRN3-202ENST00000308537 ALAS2P22557 587 aa18.93■□□□□ 0.62
PDZRN3-202ENST00000308537 CMPK1P30085 196 aa18.93■□□□□ 0.62
PDZRN3-202ENST00000308537 OTX2P32243 289 aa18.93■□□□□ 0.62
PDZRN3-202ENST00000308537 HSD17B2P37059 387 aa18.93■□□□□ 0.62
PDZRN3-202ENST00000308537 FOLR3P41439 243 aa18.93■□□□□ 0.62
PDZRN3-202ENST00000308537 RPL21P46778 160 aaKnown RBP18.93■□□□□ 0.62
PDZRN3-202ENST00000308537 OR1D4P47884 311 aa18.93■□□□□ 0.62
PDZRN3-202ENST00000308537 RELAQ04206 551 aa18.93■□□□□ 0.62
PDZRN3-202ENST00000308537 FRG1Q14331 258 aaKnown RBP18.93■□□□□ 0.62
PDZRN3-202ENST00000308537 RAB43Q86YS6 212 aa18.93■□□□□ 0.62
PDZRN3-202ENST00000308537 PDIK1LQ8N165 341 aa18.93■□□□□ 0.62
PDZRN3-202ENST00000308537 PTERQ96BW5 349 aa18.93■□□□□ 0.62
PDZRN3-202ENST00000308537 RUNDC3BQ96NL0 473 aa18.93■□□□□ 0.62
PDZRN3-202ENST00000308537 CLMPQ9H6B4 373 aa18.93■□□□□ 0.62
PDZRN3-202ENST00000308537 WDR54Q9H977 334 aa18.93■□□□□ 0.62
PDZRN3-202ENST00000308537 MRPS30Q9NP92 439 aaKnown RBP18.93■□□□□ 0.62
PDZRN3-202ENST00000308537 STOX2Q9P2F5 926 aaPredicted RBP18.93■□□□□ 0.62
PDZRN3-202ENST00000308537 CTSFQ9UBX1 484 aa18.93■□□□□ 0.62
PDZRN3-202ENST00000308537 NDOR1Q9UHB4 597 aa18.93■□□□□ 0.62
PDZRN3-202ENST00000308537 SH2B3Q9UQQ2 575 aa18.93■□□□□ 0.62
PDZRN3-202ENST00000308537 PDE10AQ9Y233 779 aa18.93■□□□□ 0.62
PDZRN3-202ENST00000308537 HYKKA2RU49 373 aa18.92■□□□□ 0.62
PDZRN3-202ENST00000308537 H0YGG7 62 aa18.92■□□□□ 0.62
PDZRN3-202ENST00000308537 SMAPO00193 183 aa18.92■□□□□ 0.62
PDZRN3-202ENST00000308537 ATXN8OSP0DMR3 200 aa18.92■□□□□ 0.62
PDZRN3-202ENST00000308537 ARF3P61204 181 aaPredicted RBP18.92■□□□□ 0.62
PDZRN3-202ENST00000308537 MRPS25P82663 173 aaKnown RBP18.92■□□□□ 0.62
PDZRN3-202ENST00000308537 KCNC4Q03721 635 aa18.92■□□□□ 0.62
PDZRN3-202ENST00000308537 IGFBP7Q16270 282 aa18.92■□□□□ 0.62
PDZRN3-202ENST00000308537 PHKG1Q16816 387 aa18.92■□□□□ 0.62
PDZRN3-202ENST00000308537 MBOAT1Q6ZNC8 495 aa18.92■□□□□ 0.62
PDZRN3-202ENST00000308537 UBE2R2Q712K3 238 aaPredicted RBP18.92■□□□□ 0.62
PDZRN3-202ENST00000308537 C17orf53Q8N3J3 647 aaPredicted RBP18.92■□□□□ 0.62
PDZRN3-202ENST00000308537 METTL27Q8N6F8 245 aaPredicted RBP18.92■□□□□ 0.62
PDZRN3-202ENST00000308537 LRRC39Q96DD0 335 aa18.92■□□□□ 0.62
PDZRN3-202ENST00000308537 SMAD5Q99717 465 aaKnown RBP18.92■□□□□ 0.62
PDZRN3-202ENST00000308537 OLFM1Q99784 485 aa18.92■□□□□ 0.62
PDZRN3-202ENST00000308537 MESP1Q9BRJ9 268 aa18.92■□□□□ 0.62
PDZRN3-202ENST00000308537 MCMBPQ9BTE3 642 aa18.92■□□□□ 0.62
PDZRN3-202ENST00000308537 P4HTMQ9NXG6 502 aa18.92■□□□□ 0.62
PDZRN3-202ENST00000308537 ZC3H7BQ9UGR2 993 aaKnown RBP18.92■□□□□ 0.62
PDZRN3-202ENST00000308537 TRMT6Q9UJA5 497 aaKnown RBP18.92■□□□□ 0.62
PDZRN3-202ENST00000308537 PSAT1Q9Y617 370 aa18.92■□□□□ 0.62
PDZRN3-202ENST00000308537 IGLV3-12A0A075B6K2 115 aa18.91■□□□□ 0.62
PDZRN3-202ENST00000308537 P2RX6O15547 441 aa18.91■□□□□ 0.62
PDZRN3-202ENST00000308537 ZBTB14O43829 449 aa18.91■□□□□ 0.62
PDZRN3-202ENST00000308537 SORBS2O94875 1100 aaKnown RBP18.91■□□□□ 0.62
PDZRN3-202ENST00000308537 FDXRP22570 491 aa18.91■□□□□ 0.62
PDZRN3-202ENST00000308537 RPA3P35244 121 aaPredicted RBP18.91■□□□□ 0.62
PDZRN3-202ENST00000308537 HIF1AQ16665 826 aa18.91■□□□□ 0.62
PDZRN3-202ENST00000308537 FAM214AQ32MH5 1076 aa18.91■□□□□ 0.62
PDZRN3-202ENST00000308537 NADK2Q4G0N4 442 aa18.91■□□□□ 0.62
PDZRN3-202ENST00000308537 DCAF10Q5QP82 559 aa18.91■□□□□ 0.62
PDZRN3-202ENST00000308537 TTC29Q8NA56 475 aaPredicted RBP18.91■□□□□ 0.62
PDZRN3-202ENST00000308537 MIB2Q96AX9 1013 aa18.91■□□□□ 0.62
PDZRN3-202ENST00000308537 CFAP36Q96G28 342 aa18.91■□□□□ 0.62
PDZRN3-202ENST00000308537 SNF8Q96H20 258 aa18.91■□□□□ 0.62
PDZRN3-202ENST00000308537 IP6K3Q96PC2 410 aa18.91■□□□□ 0.62
PDZRN3-202ENST00000308537 KRT12Q99456 494 aa18.91■□□□□ 0.62
PDZRN3-202ENST00000308537 TAS2R13Q9NYV9 303 aa18.91■□□□□ 0.62
PDZRN3-202ENST00000308537 MOCS1Q9NZB8 636 aa18.91■□□□□ 0.62
PDZRN3-202ENST00000308537 RNF14Q9UBS8 474 aa18.91■□□□□ 0.62
PDZRN3-202ENST00000308537 GPN3Q9UHW5 284 aaPredicted RBP18.91■□□□□ 0.62
PDZRN3-202ENST00000308537 IKZF3Q9UKT9 509 aa18.91■□□□□ 0.62
PDZRN3-202ENST00000308537 RUVBL1Q9Y265 456 aaKnown RBP18.91■□□□□ 0.62
PDZRN3-202ENST00000308537 HS3ST3B1Q9Y662 390 aa18.91■□□□□ 0.62
PDZRN3-202ENST00000308537 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.91■□□□□ 0.62
PDZRN3-202ENST00000308537 SOCS6O14544 535 aa18.9■□□□□ 0.62
PDZRN3-202ENST00000308537 CD63P08962 238 aa18.9■□□□□ 0.62
PDZRN3-202ENST00000308537 MMP11P24347 488 aa18.9■□□□□ 0.62
PDZRN3-202ENST00000308537 PGDP52209 483 aa18.9■□□□□ 0.62
PDZRN3-202ENST00000308537 EMP3P54852 163 aa18.9■□□□□ 0.62
PDZRN3-202ENST00000308537 SOX8P57073 446 aa18.9■□□□□ 0.62
PDZRN3-202ENST00000308537 TBPL1P62380 186 aa18.9■□□□□ 0.62
PDZRN3-202ENST00000308537 ABATP80404 500 aa18.9■□□□□ 0.62
PDZRN3-202ENST00000308537 NAA25Q14CX7 972 aa18.9■□□□□ 0.62
PDZRN3-202ENST00000308537 HKDC1Q2TB90 917 aa18.9■□□□□ 0.62
PDZRN3-202ENST00000308537 TMEM207Q6UWW9 146 aa18.9■□□□□ 0.62
PDZRN3-202ENST00000308537 TEX19Q8NA77 164 aa18.9■□□□□ 0.62
PDZRN3-202ENST00000308537 Q8NA96 180 aa18.9■□□□□ 0.62
PDZRN3-202ENST00000308537 TRIM31Q9BZY9 425 aa18.9■□□□□ 0.62
PDZRN3-202ENST00000308537 SNX24Q9Y343 169 aa18.9■□□□□ 0.62
PDZRN3-202ENST00000308537 PCDHGB7Q9Y5F8 929 aa18.9■□□□□ 0.62
PDZRN3-202ENST00000308537 MAU2Q9Y6X3 613 aa18.9■□□□□ 0.62
PDZRN3-202ENST00000308537 SPTAN1Q13813 2472 aaKnown RBP18.89■□□□□ 0.61
PDZRN3-202ENST00000308537 ZNF839A8K0R7 811 aa18.89■□□□□ 0.61
PDZRN3-202ENST00000308537 EFCAB8A8MWE9 144 aa18.89■□□□□ 0.61
PDZRN3-202ENST00000308537 HAT1O14929 419 aa18.89■□□□□ 0.61
PDZRN3-202ENST00000308537 SYF2O95926 243 aaKnown RBP18.89■□□□□ 0.61
PDZRN3-202ENST00000308537 EZRP15311 586 aaKnown RBP18.89■□□□□ 0.61
PDZRN3-202ENST00000308537 CD97P48960 835 aa18.89■□□□□ 0.61
PDZRN3-202ENST00000308537 RRADP55042 308 aa18.89■□□□□ 0.61
PDZRN3-202ENST00000308537 MLLT10P55197 1068 aa18.89■□□□□ 0.61
PDZRN3-202ENST00000308537 SP140Q13342 867 aa18.89■□□□□ 0.61
PDZRN3-202ENST00000308537 HECTD2Q5U5R9 776 aa18.89■□□□□ 0.61
PDZRN3-202ENST00000308537 LRRC8EQ6NSJ5 796 aa18.89■□□□□ 0.61
PDZRN3-202ENST00000308537 KIRREL2Q6UWL6 708 aa18.89■□□□□ 0.61
PDZRN3-202ENST00000308537 VN1R4Q7Z5H5 301 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms