RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 PCDHGA11Q9Y5H2 935 aa11.49□□□□□ -0.57
TRIM40-205ENST00000307859 MYO15AQ9UKN7 3530 aa11.48□□□□□ -0.57
TRIM40-205ENST00000307859 TCRBV21S2A2A0A5A6 115 aa11.48□□□□□ -0.57
TRIM40-205ENST00000307859 KANSL1LA0AUZ9 987 aa11.48□□□□□ -0.57
TRIM40-205ENST00000307859 CACNB4O00305 520 aaPredicted RBP11.48□□□□□ -0.57
TRIM40-205ENST00000307859 NME4O00746 187 aa11.48□□□□□ -0.57
TRIM40-205ENST00000307859 SLC31A1O15431 190 aa11.48□□□□□ -0.57
TRIM40-205ENST00000307859 PI15O43692 258 aa11.48□□□□□ -0.57
TRIM40-205ENST00000307859 PRPS2P11908 318 aa11.48□□□□□ -0.57
TRIM40-205ENST00000307859 ACP5P13686 325 aa11.48□□□□□ -0.57
TRIM40-205ENST00000307859 AMD1P17707 334 aa11.48□□□□□ -0.57
TRIM40-205ENST00000307859 SLC6A2P23975 617 aa11.48□□□□□ -0.57
TRIM40-205ENST00000307859 MAPK1P28482 360 aa11.48□□□□□ -0.57
TRIM40-205ENST00000307859 HSD17B2P37059 387 aa11.48□□□□□ -0.57
TRIM40-205ENST00000307859 ERFP50548 548 aa11.48□□□□□ -0.57
TRIM40-205ENST00000307859 TPMTP51580 245 aa11.48□□□□□ -0.57
TRIM40-205ENST00000307859 TRAP1Q12931 704 aaKnown RBP11.48□□□□□ -0.57
TRIM40-205ENST00000307859 NFYCQ13952 458 aa11.48□□□□□ -0.57
TRIM40-205ENST00000307859 TRIM25Q14258 630 aaKnown RBP11.48□□□□□ -0.57
TRIM40-205ENST00000307859 C10orf62Q5T681 223 aaPredicted RBP11.48□□□□□ -0.57
TRIM40-205ENST00000307859 WLSQ5T9L3 541 aa11.48□□□□□ -0.57
TRIM40-205ENST00000307859 ATG9BQ674R7 924 aa11.48□□□□□ -0.57
TRIM40-205ENST00000307859 PRR23BQ6ZRT6 265 aa11.48□□□□□ -0.57
TRIM40-205ENST00000307859 TMPRSS11BQ86T26 416 aa11.48□□□□□ -0.57
TRIM40-205ENST00000307859 FAM124AQ86V42 546 aa11.48□□□□□ -0.57
TRIM40-205ENST00000307859 SLC15A3Q8IY34 581 aa11.48□□□□□ -0.57
TRIM40-205ENST00000307859 PHC3Q8NDX5 983 aa11.48□□□□□ -0.57
TRIM40-205ENST00000307859 OR2T34Q8NGX1 318 aa11.48□□□□□ -0.57
TRIM40-205ENST00000307859 SETD7Q8WTS6 366 aaKnown RBP11.48□□□□□ -0.57
TRIM40-205ENST00000307859 APIPQ96GX9 242 aa11.48□□□□□ -0.57
TRIM40-205ENST00000307859 ZBTB18Q99592 522 aa11.48□□□□□ -0.57
TRIM40-205ENST00000307859 MENTQ9BUN1 341 aa11.48□□□□□ -0.57
TRIM40-205ENST00000307859 EFCAB11Q9BUY7 163 aa11.48□□□□□ -0.57
TRIM40-205ENST00000307859 DPY30Q9C005 99 aa11.48□□□□□ -0.57
TRIM40-205ENST00000307859 CLMPQ9H6B4 373 aa11.48□□□□□ -0.57
TRIM40-205ENST00000307859 SGK2Q9HBY8 427 aa11.48□□□□□ -0.57
TRIM40-205ENST00000307859 SPATA7Q9P0W8 599 aa11.48□□□□□ -0.57
TRIM40-205ENST00000307859 PSMD13Q9UNM6 376 aa11.48□□□□□ -0.57
TRIM40-205ENST00000307859 SH2B3Q9UQQ2 575 aa11.48□□□□□ -0.57
TRIM40-205ENST00000307859 DLGAP4Q9Y2H0 992 aa11.48□□□□□ -0.57
TRIM40-205ENST00000307859 PCDHA9Q9Y5H5 950 aa11.48□□□□□ -0.57
TRIM40-205ENST00000307859 ZNF292O60281 2723 aa11.48□□□□□ -0.57
TRIM40-205ENST00000307859 ARHGEF17Q96PE2 2063 aaPredicted RBP11.47□□□□□ -0.57
TRIM40-205ENST00000307859 CEP250Q9BV73 2442 aa11.47□□□□□ -0.57
TRIM40-205ENST00000307859 H3BNX3 289 aa11.47□□□□□ -0.57
TRIM40-205ENST00000307859 IGLV3-19P01714 112 aa11.47□□□□□ -0.57
TRIM40-205ENST00000307859 C1GALT1C1LP0DN25 315 aa11.47□□□□□ -0.57
TRIM40-205ENST00000307859 HSD17B1P14061 328 aa11.47□□□□□ -0.57
TRIM40-205ENST00000307859 ACSL1P33121 698 aa11.47□□□□□ -0.57
TRIM40-205ENST00000307859 MSX2P35548 267 aaPredicted RBP11.47□□□□□ -0.57
TRIM40-205ENST00000307859 CLCNKAP51800 687 aa11.47□□□□□ -0.57
TRIM40-205ENST00000307859 CLDN8P56748 225 aa11.47□□□□□ -0.57
TRIM40-205ENST00000307859 TDGQ13569 410 aa11.47□□□□□ -0.57
TRIM40-205ENST00000307859 CYP2A13Q16696 494 aa11.47□□□□□ -0.57
TRIM40-205ENST00000307859 PRAMEF14Q5SWL7 426 aa11.47□□□□□ -0.57
TRIM40-205ENST00000307859 PRAMEF13Q5VWM6 474 aa11.47□□□□□ -0.57
TRIM40-205ENST00000307859 MED27Q6P2C8 311 aa11.47□□□□□ -0.57
TRIM40-205ENST00000307859 LCTLQ6UWM7 567 aa11.47□□□□□ -0.57
TRIM40-205ENST00000307859 LRRC74BQ6ZQY2 392 aa11.47□□□□□ -0.57
TRIM40-205ENST00000307859 CHST15Q7LFX5 561 aaPredicted RBP11.47□□□□□ -0.57
TRIM40-205ENST00000307859 TBC1D21Q8IYX1 336 aa11.47□□□□□ -0.57
TRIM40-205ENST00000307859 DTWD2Q8NBA8 298 aa11.47□□□□□ -0.57
TRIM40-205ENST00000307859 FAM156AQ8NDB6 213 aa11.47□□□□□ -0.57
TRIM40-205ENST00000307859 BHLHE22Q8NFJ8 381 aaPredicted RBP11.47□□□□□ -0.57
TRIM40-205ENST00000307859 OR7G3Q8NG95 312 aa11.47□□□□□ -0.57
TRIM40-205ENST00000307859 NRG4Q8WWG1 115 aa11.47□□□□□ -0.57
TRIM40-205ENST00000307859 SLC5A11Q8WWX8 675 aa11.47□□□□□ -0.57
TRIM40-205ENST00000307859 PYDC1Q8WXC3 89 aa11.47□□□□□ -0.57
TRIM40-205ENST00000307859 TMEM125Q96AQ2 219 aa11.47□□□□□ -0.57
TRIM40-205ENST00000307859 REPS1Q96D71 796 aa11.47□□□□□ -0.57
TRIM40-205ENST00000307859 C11orf24Q96F05 449 aaPredicted RBP11.47□□□□□ -0.57
TRIM40-205ENST00000307859 TRIT1Q9H3H1 467 aaKnown RBP11.47□□□□□ -0.57
TRIM40-205ENST00000307859 IL1RL2Q9HB29 575 aa11.47□□□□□ -0.57
TRIM40-205ENST00000307859 CMTM6Q9NX76 183 aa11.47□□□□□ -0.57
TRIM40-205ENST00000307859 USP36Q9P275 1121 aaKnown RBP11.47□□□□□ -0.57
TRIM40-205ENST00000307859 VPS29Q9UBQ0 182 aa11.47□□□□□ -0.57
TRIM40-205ENST00000307859 SUFUQ9UMX1 484 aa11.47□□□□□ -0.57
TRIM40-205ENST00000307859 C15orf41Q9Y2V0 281 aa11.47□□□□□ -0.57
TRIM40-205ENST00000307859 ATRXP46100 2492 aa11.47□□□□□ -0.57
TRIM40-205ENST00000307859 NUP214P35658 2090 aaPredicted RBP11.46□□□□□ -0.57
TRIM40-205ENST00000307859 MDC1Q14676 2089 aaKnown RBP11.46□□□□□ -0.57
TRIM40-205ENST00000307859 CEP192Q8TEP8 1941 aa11.46□□□□□ -0.57
TRIM40-205ENST00000307859 C15orf38-AP3S2A0A0A6YYH1 394 aa11.46□□□□□ -0.57
TRIM40-205ENST00000307859 POM121BA6NF01 834 aa11.46□□□□□ -0.57
TRIM40-205ENST00000307859 LRRC72A6NJI9 287 aa11.46□□□□□ -0.57
TRIM40-205ENST00000307859 MAN2B1O00754 1011 aa11.46□□□□□ -0.57
TRIM40-205ENST00000307859 IL6P05231 212 aa11.46□□□□□ -0.57
TRIM40-205ENST00000307859 SDC1P18827 310 aa11.46□□□□□ -0.57
TRIM40-205ENST00000307859 HNRNPA2B1P22626 353 aaKnown RBP11.46□□□□□ -0.57
TRIM40-205ENST00000307859 VHLP40337 213 aa11.46□□□□□ -0.57
TRIM40-205ENST00000307859 DGKQP52824 942 aa11.46□□□□□ -0.57
TRIM40-205ENST00000307859 CLNS1AP54105 237 aaKnown RBP11.46□□□□□ -0.57
TRIM40-205ENST00000307859 SESN3P58005 492 aa11.46□□□□□ -0.57
TRIM40-205ENST00000307859 CTBSQ01459 385 aa11.46□□□□□ -0.57
TRIM40-205ENST00000307859 COL9A2Q14055 689 aaPredicted RBP11.46□□□□□ -0.57
TRIM40-205ENST00000307859 CAPRIN1Q14444 709 aaKnown RBP11.46□□□□□ -0.57
TRIM40-205ENST00000307859 NFATC4Q14934 902 aa11.46□□□□□ -0.57
TRIM40-205ENST00000307859 MLF2Q15773 248 aaPredicted RBP11.46□□□□□ -0.57
TRIM40-205ENST00000307859 RSPO4Q2I0M5 234 aaPredicted RBP11.46□□□□□ -0.57
TRIM40-205ENST00000307859 PAGE2BQ5JRK9 111 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms