RNA–Protein interactions for RNA: ENST00000306658.7

KRT28-201, Transcript of keratin 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT28, Length 1,685 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28-201ENST00000306658 OR6C2Q9NZP2 312 aa16.91■□□□□ 0.3
KRT28-201ENST00000306658 CCDC167Q9P0B6 97 aa16.91■□□□□ 0.3
KRT28-201ENST00000306658 ICKQ9UPZ9 632 aa16.91■□□□□ 0.3
KRT28-201ENST00000306658 SH2B3Q9UQQ2 575 aa16.91■□□□□ 0.3
KRT28-201ENST00000306658 EIF3LQ9Y262 564 aaKnown RBP16.91■□□□□ 0.3
KRT28-201ENST00000306658 PCDHB11Q9Y5F2 797 aa16.91■□□□□ 0.3
KRT28-201ENST00000306658 GPR45Q9Y5Y3 372 aa16.91■□□□□ 0.3
KRT28-201ENST00000306658 TRBV23OR9-2A0A075B6M9 112 aa16.91■□□□□ 0.3
KRT28-201ENST00000306658 PRAMEF33A0A0G2JMD5 474 aa16.91■□□□□ 0.3
KRT28-201ENST00000306658 A0A1W2PPV9 198 aa16.91■□□□□ 0.3
KRT28-201ENST00000306658 VILLO15195 856 aa16.91■□□□□ 0.3
KRT28-201ENST00000306658 BCAT2O15382 392 aaPredicted RBP16.91■□□□□ 0.3
KRT28-201ENST00000306658 CDH1P12830 882 aa16.91■□□□□ 0.3
KRT28-201ENST00000306658 GPX3P22352 226 aa16.91■□□□□ 0.3
KRT28-201ENST00000306658 PRPH2P23942 346 aa16.91■□□□□ 0.3
KRT28-201ENST00000306658 CXCR2P25025 360 aa16.91■□□□□ 0.3
KRT28-201ENST00000306658 DIO3P55073 304 aa16.91■□□□□ 0.3
KRT28-201ENST00000306658 SLBPQ14493 270 aaKnown RBP eCLIP16.91■□□□□ 0.3
KRT28-201ENST00000306658 RFTN2Q52LD8 501 aaPredicted RBP16.91■□□□□ 0.3
KRT28-201ENST00000306658 LAYNQ6UX15 382 aa16.91■□□□□ 0.3
KRT28-201ENST00000306658 RINLQ6ZS11 566 aa16.91■□□□□ 0.3
KRT28-201ENST00000306658 LONP2Q86WA8 852 aa16.91■□□□□ 0.3
KRT28-201ENST00000306658 AMIGO1Q86WK6 493 aa16.91■□□□□ 0.3
KRT28-201ENST00000306658 SNX32Q86XE0 403 aa16.91■□□□□ 0.3
KRT28-201ENST00000306658 KIF2BQ8N4N8 673 aa16.91■□□□□ 0.3
KRT28-201ENST00000306658 NRTNQ99748 197 aa16.91■□□□□ 0.3
KRT28-201ENST00000306658 RTKNQ9BST9 563 aa16.91■□□□□ 0.3
KRT28-201ENST00000306658 C1orf50Q9BV19 199 aa16.91■□□□□ 0.3
KRT28-201ENST00000306658 LRRC61Q9BV99 259 aa16.91■□□□□ 0.3
KRT28-201ENST00000306658 BRINP2Q9C0B6 783 aa16.91■□□□□ 0.3
KRT28-201ENST00000306658 PRM3Q9NNZ6 103 aa16.91■□□□□ 0.3
KRT28-201ENST00000306658 SLC40A1Q9NP59 571 aa16.91■□□□□ 0.3
KRT28-201ENST00000306658 POT1Q9NUX5 634 aa16.91■□□□□ 0.3
KRT28-201ENST00000306658 TDRD6O60522 2096 aaKnown RBP16.9■□□□□ 0.3
KRT28-201ENST00000306658 NPIPB8E9PQR5 432 aa16.9■□□□□ 0.3
KRT28-201ENST00000306658 VIPP01282 170 aa16.9■□□□□ 0.3
KRT28-201ENST00000306658 PCNAP12004 261 aa16.9■□□□□ 0.3
KRT28-201ENST00000306658 AFF3P51826 1226 aaKnown RBP16.9■□□□□ 0.3
KRT28-201ENST00000306658 C21orf59P57076 290 aa16.9■□□□□ 0.3
KRT28-201ENST00000306658 NXPH1P58417 271 aa16.9■□□□□ 0.3
KRT28-201ENST00000306658 RPL38P63173 70 aaKnown RBP16.9■□□□□ 0.3
KRT28-201ENST00000306658 PRDX1Q06830 199 aaKnown RBP16.9■□□□□ 0.3
KRT28-201ENST00000306658 STX5Q13190 355 aa16.9■□□□□ 0.3
KRT28-201ENST00000306658 C1orf61Q13536 156 aa16.9■□□□□ 0.3
KRT28-201ENST00000306658 PDCD4Q53EL6 469 aaKnown RBP16.9■□□□□ 0.3
KRT28-201ENST00000306658 TJAP1Q5JTD0 557 aa16.9■□□□□ 0.3
KRT28-201ENST00000306658 CACHD1Q5VU97 1274 aa16.9■□□□□ 0.3
KRT28-201ENST00000306658 IL23RQ5VWK5 629 aa16.9■□□□□ 0.3
KRT28-201ENST00000306658 ICE2Q659A1 982 aa16.9■□□□□ 0.3
KRT28-201ENST00000306658 PAOXQ6QHF9 649 aa16.9■□□□□ 0.3
KRT28-201ENST00000306658 ARMCX6Q7L4S7 300 aa16.9■□□□□ 0.3
KRT28-201ENST00000306658 ZFAND4Q86XD8 727 aa16.9■□□□□ 0.3
KRT28-201ENST00000306658 C1orf210Q8IVY1 113 aa16.9■□□□□ 0.3
KRT28-201ENST00000306658 LAS2Q8IYD9 372 aa16.9■□□□□ 0.3
KRT28-201ENST00000306658 ABHD11Q8NFV4 315 aa16.9■□□□□ 0.3
KRT28-201ENST00000306658 RAB3IPQ96QF0 476 aaPredicted RBP16.9■□□□□ 0.3
KRT28-201ENST00000306658 MTERF1Q99551 399 aaKnown RBP16.9■□□□□ 0.3
KRT28-201ENST00000306658 AIF1LQ9BQI0 150 aa16.9■□□□□ 0.3
KRT28-201ENST00000306658 TMEM45AQ9NWC5 275 aa16.9■□□□□ 0.3
KRT28-201ENST00000306658 VPS29Q9UBQ0 182 aa16.9■□□□□ 0.3
KRT28-201ENST00000306658 THADAQ6YHU6 1953 aa16.89■□□□□ 0.3
KRT28-201ENST00000306658 SPAG17Q6Q759 2223 aa16.89■□□□□ 0.29
KRT28-201ENST00000306658 PIPSLA2A3N6 862 aa16.89■□□□□ 0.29
KRT28-201ENST00000306658 TMEM221A6NGB7 291 aa16.89■□□□□ 0.29
KRT28-201ENST00000306658 H0YHG0 523 aa16.89■□□□□ 0.29
KRT28-201ENST00000306658 M0R296 226 aa16.89■□□□□ 0.29
KRT28-201ENST00000306658 SNRPB2P08579 225 aaKnown RBP16.89■□□□□ 0.29
KRT28-201ENST00000306658 TDGF1P13385 188 aa16.89■□□□□ 0.29
KRT28-201ENST00000306658 NQO1P15559 274 aaKnown RBP16.89■□□□□ 0.29
KRT28-201ENST00000306658 PCSK2P16519 638 aa16.89■□□□□ 0.29
KRT28-201ENST00000306658 CSNK1EP49674 416 aaKnown RBP16.89■□□□□ 0.29
KRT28-201ENST00000306658 CCR8P51685 355 aa16.89■□□□□ 0.29
KRT28-201ENST00000306658 HNRNPKP61978 463 aaKnown RBP eCLIP16.89■□□□□ 0.29
KRT28-201ENST00000306658 PHEXP78562 749 aa16.89■□□□□ 0.29
KRT28-201ENST00000306658 ABATP80404 500 aa16.89■□□□□ 0.29
KRT28-201ENST00000306658 DDX39BQ13838 428 aaKnown RBP16.89■□□□□ 0.29
KRT28-201ENST00000306658 GKN2Q86XP6 184 aa16.89■□□□□ 0.29
KRT28-201ENST00000306658 FAM129CQ86XR2 697 aa16.89■□□□□ 0.29
KRT28-201ENST00000306658 RBM15BQ8NDT2 890 aaKnown RBP16.89■□□□□ 0.29
KRT28-201ENST00000306658 FAM46DQ8NEK8 389 aa16.89■□□□□ 0.29
KRT28-201ENST00000306658 OR4E2Q8NGC2 313 aa16.89■□□□□ 0.29
KRT28-201ENST00000306658 OR2A1Q8NGT9 310 aa16.89■□□□□ 0.29
KRT28-201ENST00000306658 HUS1BQ8NHY5 278 aa16.89■□□□□ 0.29
KRT28-201ENST00000306658 CMTM7Q96FZ5 175 aa16.89■□□□□ 0.29
KRT28-201ENST00000306658 METTL2AQ96IZ6 378 aaKnown RBP16.89■□□□□ 0.29
KRT28-201ENST00000306658 SLC25A23Q9BV35 468 aa16.89■□□□□ 0.29
KRT28-201ENST00000306658 TBC1D10AQ9BXI6 508 aa16.89■□□□□ 0.29
KRT28-201ENST00000306658 PITHD1Q9GZP4 211 aaPredicted RBP16.89■□□□□ 0.29
KRT28-201ENST00000306658 SRMSQ9H3Y6 488 aa16.89■□□□□ 0.29
KRT28-201ENST00000306658 NMRK1Q9NWW6 199 aa16.89■□□□□ 0.29
KRT28-201ENST00000306658 ASIC5Q9NY37 505 aa16.89■□□□□ 0.29
KRT28-201ENST00000306658 ZIM2Q9NZV7 527 aa16.89■□□□□ 0.29
KRT28-201ENST00000306658 CPNE7Q9UBL6 633 aa16.89■□□□□ 0.29
KRT28-201ENST00000306658 SPASTQ9UBP0 616 aa16.89■□□□□ 0.29
KRT28-201ENST00000306658 TMED5Q9Y3A6 229 aa16.89■□□□□ 0.29
KRT28-201ENST00000306658 TSC22D4Q9Y3Q8 395 aa16.89■□□□□ 0.29
KRT28-201ENST00000306658 FOXE1O00358 373 aaPredicted RBP16.88■□□□□ 0.29
KRT28-201ENST00000306658 CCNDBP1O95273 360 aa16.88■□□□□ 0.29
KRT28-201ENST00000306658 CELA2BP08218 269 aaPredicted RBP16.88■□□□□ 0.29
KRT28-201ENST00000306658 PSMB5P28074 263 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms