RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 CD244Q9BZW8 370 aa15.52■□□□□ 0.08
USP42-201ENST00000306177 NSUN3Q9H649 340 aaKnown RBP15.52■□□□□ 0.08
USP42-201ENST00000306177 B4GALT6Q9UBX8 382 aa15.52■□□□□ 0.08
USP42-201ENST00000306177 ADAMTS5Q9UNA0 930 aa15.52■□□□□ 0.08
USP42-201ENST00000306177 FAM72CH0Y354 149 aa15.52■□□□□ 0.08
USP42-201ENST00000306177 KMOO15229 486 aa15.52■□□□□ 0.08
USP42-201ENST00000306177 BEST1O76090 585 aa15.52■□□□□ 0.08
USP42-201ENST00000306177 CYP11A1P05108 521 aa15.52■□□□□ 0.08
USP42-201ENST00000306177 GNSP15586 552 aa15.52■□□□□ 0.08
USP42-201ENST00000306177 EMX2Q04743 252 aa15.52■□□□□ 0.08
USP42-201ENST00000306177 CRB2Q5IJ48 1285 aa15.52■□□□□ 0.08
USP42-201ENST00000306177 FAM72AQ5TYM5 149 aa15.52■□□□□ 0.08
USP42-201ENST00000306177 EGFLAMQ63HQ2 1017 aa15.52■□□□□ 0.08
USP42-201ENST00000306177 FAM72DQ6L9T8 149 aa15.52■□□□□ 0.08
USP42-201ENST00000306177 FAM72BQ86X60 149 aa15.52■□□□□ 0.08
USP42-201ENST00000306177 IFNLR1Q8IU57 520 aaPredicted RBP15.52■□□□□ 0.08
USP42-201ENST00000306177 LGI4Q8N135 537 aa15.52■□□□□ 0.08
USP42-201ENST00000306177 NXPE1Q8N323 547 aa15.52■□□□□ 0.08
USP42-201ENST00000306177 PHF12Q96QT6 1004 aa15.52■□□□□ 0.08
USP42-201ENST00000306177 POLE3Q9NRF9 147 aa15.52■□□□□ 0.08
USP42-201ENST00000306177 NKIRAS2Q9NYR9 191 aa15.52■□□□□ 0.08
USP42-201ENST00000306177 MATN2O00339 956 aa15.52■□□□□ 0.07
USP42-201ENST00000306177 G6PDP11413 515 aa15.52■□□□□ 0.07
USP42-201ENST00000306177 MAGP20916 626 aa15.52■□□□□ 0.07
USP42-201ENST00000306177 CCKBRP32239 447 aa15.52■□□□□ 0.07
USP42-201ENST00000306177 DGKEP52429 567 aa15.52■□□□□ 0.07
USP42-201ENST00000306177 PITX1P78337 314 aaPredicted RBP15.52■□□□□ 0.07
USP42-201ENST00000306177 RAB30Q15771 203 aa15.52■□□□□ 0.07
USP42-201ENST00000306177 PDCD4Q53EL6 469 aaKnown RBP15.52■□□□□ 0.07
USP42-201ENST00000306177 NUP54Q7Z3B4 507 aa15.52■□□□□ 0.07
USP42-201ENST00000306177 RAB43Q86YS6 212 aa15.52■□□□□ 0.07
USP42-201ENST00000306177 UMODL1-AS1Q8N2C9 162 aa15.52■□□□□ 0.07
USP42-201ENST00000306177 SLC5A11Q8WWX8 675 aa15.52■□□□□ 0.07
USP42-201ENST00000306177 COMMD4Q9H0A8 199 aa15.52■□□□□ 0.07
USP42-201ENST00000306177 TBC1D17Q9HA65 648 aa15.52■□□□□ 0.07
USP42-201ENST00000306177 FAM120CQ9NX05 1096 aaKnown RBP15.52■□□□□ 0.07
USP42-201ENST00000306177 ACTR3BQ9P1U1 418 aa15.52■□□□□ 0.07
USP42-201ENST00000306177 CDC14AQ9UNH5 594 aa15.52■□□□□ 0.07
USP42-201ENST00000306177 CFAP20Q9Y6A4 193 aaKnown RBP15.52■□□□□ 0.07
USP42-201ENST00000306177 CCDC88AQ3V6T2 1871 aa15.52■□□□□ 0.07
USP42-201ENST00000306177 A0A0J9YVX5 310 aa15.52■□□□□ 0.07
USP42-201ENST00000306177 KCNA5P22460 613 aa15.52■□□□□ 0.07
USP42-201ENST00000306177 SCN1BQ07699 218 aa15.52■□□□□ 0.07
USP42-201ENST00000306177 KCNC3Q14003 757 aa15.52■□□□□ 0.07
USP42-201ENST00000306177 RBM48Q5RL73 367 aaKnown RBP15.52■□□□□ 0.07
USP42-201ENST00000306177 ARHGAP39Q9C0H5 1083 aa15.52■□□□□ 0.07
USP42-201ENST00000306177 MBD2Q9UBB5 411 aa15.52■□□□□ 0.07
USP42-201ENST00000306177 PGLSO95336 258 aa15.51■□□□□ 0.07
USP42-201ENST00000306177 XKP51811 444 aa15.51■□□□□ 0.07
USP42-201ENST00000306177 GMFBP60983 142 aa15.51■□□□□ 0.07
USP42-201ENST00000306177 MXD1Q05195 221 aa15.51■□□□□ 0.07
USP42-201ENST00000306177 PEX13Q92968 403 aa15.51■□□□□ 0.07
USP42-201ENST00000306177 OTUB2Q96DC9 234 aa15.51■□□□□ 0.07
USP42-201ENST00000306177 ZNF641Q96N77 438 aaPredicted RBP15.51■□□□□ 0.07
USP42-201ENST00000306177 YIPF4Q9BSR8 244 aa15.51■□□□□ 0.07
USP42-201ENST00000306177 BTBD1Q9H0C5 482 aa15.51■□□□□ 0.07
USP42-201ENST00000306177 PTTG2Q9NZH5 202 aa15.51■□□□□ 0.07
USP42-201ENST00000306177 CYTH4Q9UIA0 394 aa15.51■□□□□ 0.07
USP42-201ENST00000306177 FAM25EA8MYX2 175 aa15.51■□□□□ 0.07
USP42-201ENST00000306177 B4DGG1 531 aa15.51■□□□□ 0.07
USP42-201ENST00000306177 BHMG1C9JSJ3 638 aaPredicted RBP15.51■□□□□ 0.07
USP42-201ENST00000306177 RSL1D1O76021 490 aaKnown RBP15.51■□□□□ 0.07
USP42-201ENST00000306177 CREB5Q02930 508 aa15.51■□□□□ 0.07
USP42-201ENST00000306177 PLEKHG6Q3KR16 790 aa15.51■□□□□ 0.07
USP42-201ENST00000306177 OR2T5Q6IEZ7 315 aa15.51■□□□□ 0.07
USP42-201ENST00000306177 AVL9Q8NBF6 648 aa15.51■□□□□ 0.07
USP42-201ENST00000306177 KCT2Q8NC54 265 aa15.51■□□□□ 0.07
USP42-201ENST00000306177 OR2T29Q8NH02 315 aa15.51■□□□□ 0.07
USP42-201ENST00000306177 HPS1Q92902 700 aa15.51■□□□□ 0.07
USP42-201ENST00000306177 TMBIM1Q969X1 311 aa15.51■□□□□ 0.07
USP42-201ENST00000306177 IMP4Q96G21 291 aaKnown RBP15.51■□□□□ 0.07
USP42-201ENST00000306177 TAS2R7Q9NYW3 318 aa15.51■□□□□ 0.07
USP42-201ENST00000306177 HCN3Q9P1Z3 774 aa15.51■□□□□ 0.07
USP42-201ENST00000306177 UTS2RQ9UKP6 389 aa15.51■□□□□ 0.07
USP42-201ENST00000306177 RNF11Q9Y3C5 154 aa15.51■□□□□ 0.07
USP42-201ENST00000306177 CLDN25C9JDP6 229 aa15.51■□□□□ 0.07
USP42-201ENST00000306177 BTN3A3O00478 584 aa15.51■□□□□ 0.07
USP42-201ENST00000306177 TYROBPO43914 113 aa15.51■□□□□ 0.07
USP42-201ENST00000306177 PTPRCAPQ14761 206 aa15.51■□□□□ 0.07
USP42-201ENST00000306177 EOGTQ5NDL2 527 aa15.51■□□□□ 0.07
USP42-201ENST00000306177 TMIGD1Q6UXZ0 262 aa15.51■□□□□ 0.07
USP42-201ENST00000306177 CEP295NLQ96MC4 621 aa15.51■□□□□ 0.07
USP42-201ENST00000306177 SIRPGQ9P1W8 387 aa15.51■□□□□ 0.07
USP42-201ENST00000306177 TLX3O43711 291 aaPredicted RBP15.51■□□□□ 0.07
USP42-201ENST00000306177 RFPL1O75677 317 aa15.51■□□□□ 0.07
USP42-201ENST00000306177 ZNF823P16415 610 aa15.51■□□□□ 0.07
USP42-201ENST00000306177 FMO3P31513 532 aa15.51■□□□□ 0.07
USP42-201ENST00000306177 AMZ1Q400G9 498 aa15.51■□□□□ 0.07
USP42-201ENST00000306177 SPATS1Q496A3 300 aa15.51■□□□□ 0.07
USP42-201ENST00000306177 CRTC2Q53ET0 693 aaPredicted RBP15.51■□□□□ 0.07
USP42-201ENST00000306177 IQCHQ86VS3 1027 aa15.51■□□□□ 0.07
USP42-201ENST00000306177 OR9I1Q8NGQ6 314 aa15.51■□□□□ 0.07
USP42-201ENST00000306177 GSDMCQ9BYG8 508 aa15.51■□□□□ 0.07
USP42-201ENST00000306177 GPR62Q9BZJ7 368 aa15.51■□□□□ 0.07
USP42-201ENST00000306177 SMG9Q9H0W8 520 aaKnown RBP15.51■□□□□ 0.07
USP42-201ENST00000306177 NEUROD4Q9HD90 331 aa15.51■□□□□ 0.07
USP42-201ENST00000306177 PCDHGB7Q9Y5F8 929 aa15.51■□□□□ 0.07
USP42-201ENST00000306177 HMGN1P05114 100 aa15.5■□□□□ 0.07
USP42-201ENST00000306177 RPL10P27635 214 aaKnown RBP15.5■□□□□ 0.07
USP42-201ENST00000306177 HOXA11P31270 313 aaPredicted RBP15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms