RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 AP1G1O43747 822 aa12.93□□□□□ -0.34
DDX54-201ENST00000306014 SLC15A1P46059 708 aa12.93□□□□□ -0.34
DDX54-201ENST00000306014 CENPAP49450 140 aa12.93□□□□□ -0.34
DDX54-201ENST00000306014 SLC13A2Q13183 592 aa12.93□□□□□ -0.34
DDX54-201ENST00000306014 KIAA0319Q5VV43 1072 aa12.93□□□□□ -0.34
DDX54-201ENST00000306014 KRT74Q7RTS7 529 aa12.93□□□□□ -0.34
DDX54-201ENST00000306014 C16orf62Q7Z3J2 963 aa12.93□□□□□ -0.34
DDX54-201ENST00000306014 FGD2Q7Z6J4 655 aa12.93□□□□□ -0.34
DDX54-201ENST00000306014 LAPTM4BQ86VI4 370 aa12.93□□□□□ -0.34
DDX54-201ENST00000306014 VAPAQ9P0L0 249 aa12.93□□□□□ -0.34
DDX54-201ENST00000306014 MPZL2O60487 215 aa12.92□□□□□ -0.34
DDX54-201ENST00000306014 TGFB1P01137 390 aa12.92□□□□□ -0.34
DDX54-201ENST00000306014 OR1E2P47887 323 aa12.92□□□□□ -0.34
DDX54-201ENST00000306014 TUBA1BP68363 451 aa12.92□□□□□ -0.34
DDX54-201ENST00000306014 TGM3Q08188 693 aa12.92□□□□□ -0.34
DDX54-201ENST00000306014 ANGPT1Q15389 498 aa12.92□□□□□ -0.34
DDX54-201ENST00000306014 TSTQ16762 297 aaKnown RBP12.92□□□□□ -0.34
DDX54-201ENST00000306014 ATG9BQ674R7 924 aa12.92□□□□□ -0.34
DDX54-201ENST00000306014 MAMDC4Q6UXC1 1216 aa12.92□□□□□ -0.34
DDX54-201ENST00000306014 TUBA1AQ71U36 451 aa12.92□□□□□ -0.34
DDX54-201ENST00000306014 RD3Q7Z3Z2 195 aa12.92□□□□□ -0.34
DDX54-201ENST00000306014 C17orf64Q86WR6 236 aa12.92□□□□□ -0.34
DDX54-201ENST00000306014 TMEM203Q969S6 136 aa12.92□□□□□ -0.34
DDX54-201ENST00000306014 ISL2Q96A47 359 aa12.92□□□□□ -0.34
DDX54-201ENST00000306014 FAIM2Q9BWQ8 316 aa12.92□□□□□ -0.34
DDX54-201ENST00000306014 KCNH6Q9H252 994 aa12.92□□□□□ -0.34
DDX54-201ENST00000306014 PCDHGA8Q9Y5G5 932 aa12.92□□□□□ -0.34
DDX54-201ENST00000306014 ZNF701M0R085 212 aaPredicted RBP12.92□□□□□ -0.34
DDX54-201ENST00000306014 GRM6O15303 877 aa12.92□□□□□ -0.34
DDX54-201ENST00000306014 NME6O75414 186 aaPredicted RBP12.92□□□□□ -0.34
DDX54-201ENST00000306014 GJB5O95377 273 aa12.92□□□□□ -0.34
DDX54-201ENST00000306014 POP4O95707 220 aaKnown RBP12.92□□□□□ -0.34
DDX54-201ENST00000306014 SSR2P43308 183 aa12.92□□□□□ -0.34
DDX54-201ENST00000306014 TAS2R41P59536 307 aa12.92□□□□□ -0.34
DDX54-201ENST00000306014 RPP38P78345 283 aaKnown RBP12.92□□□□□ -0.34
DDX54-201ENST00000306014 LRRC70Q7Z2Q7 622 aa12.92□□□□□ -0.34
DDX54-201ENST00000306014 TRIM48Q8IWZ4 208 aa12.92□□□□□ -0.34
DDX54-201ENST00000306014 GFM1Q96RP9 751 aaKnown RBP12.92□□□□□ -0.34
DDX54-201ENST00000306014 SLC35A5Q9BS91 424 aa12.92□□□□□ -0.34
DDX54-201ENST00000306014 WRAP53Q9BUR4 548 aaKnown RBP12.92□□□□□ -0.34
DDX54-201ENST00000306014 SP140LQ9H930 580 aa12.92□□□□□ -0.34
DDX54-201ENST00000306014 MOV10Q9HCE1 1003 aaKnown RBP12.92□□□□□ -0.34
DDX54-201ENST00000306014 EQTNQ9NQ60 294 aa12.92□□□□□ -0.34
DDX54-201ENST00000306014 ING3Q9NXR8 418 aa12.92□□□□□ -0.34
DDX54-201ENST00000306014 ZNF222Q9UK12 451 aa12.92□□□□□ -0.34
DDX54-201ENST00000306014 EVPLQ92817 2033 aa12.92□□□□□ -0.34
DDX54-201ENST00000306014 FABP12A6NFH5 140 aa12.92□□□□□ -0.34
DDX54-201ENST00000306014 GTF2E2P29084 291 aaKnown RBP12.92□□□□□ -0.34
DDX54-201ENST00000306014 MAGEA12P43365 314 aa12.92□□□□□ -0.34
DDX54-201ENST00000306014 MAPK12P53778 367 aa12.92□□□□□ -0.34
DDX54-201ENST00000306014 FAM189BP81408 668 aa12.92□□□□□ -0.34
DDX54-201ENST00000306014 CYP27C1Q4G0S4 372 aa12.92□□□□□ -0.34
DDX54-201ENST00000306014 KLHL12Q53G59 568 aa12.92□□□□□ -0.34
DDX54-201ENST00000306014 TMEM220Q6QAJ8 160 aa12.92□□□□□ -0.34
DDX54-201ENST00000306014 UBXN10Q96LJ8 280 aa12.92□□□□□ -0.34
DDX54-201ENST00000306014 HTATIP2Q9BUP3 242 aa12.92□□□□□ -0.34
DDX54-201ENST00000306014 YIPF2Q9BWQ6 316 aa12.92□□□□□ -0.34
DDX54-201ENST00000306014 ABCB8Q9NUT2 735 aa12.92□□□□□ -0.34
DDX54-201ENST00000306014 GTF2A1LQ9UNN4 478 aa12.92□□□□□ -0.34
DDX54-201ENST00000306014 SPACA6W5XKT8 324 aa12.92□□□□□ -0.34
DDX54-201ENST00000306014 AREL1O15033 823 aa12.92□□□□□ -0.34
DDX54-201ENST00000306014 GJB3O75712 270 aa12.92□□□□□ -0.34
DDX54-201ENST00000306014 SELPP16109 830 aa12.92□□□□□ -0.34
DDX54-201ENST00000306014 PTX3P26022 381 aaPredicted RBP12.92□□□□□ -0.34
DDX54-201ENST00000306014 GPR17Q13304 367 aa12.92□□□□□ -0.34
DDX54-201ENST00000306014 RAPSNQ13702 412 aa12.92□□□□□ -0.34
DDX54-201ENST00000306014 CLCA4Q14CN2 919 aa12.92□□□□□ -0.34
DDX54-201ENST00000306014 ANKDD1AQ495B1 522 aa12.92□□□□□ -0.34
DDX54-201ENST00000306014 PIANPQ8IYJ0 282 aa12.92□□□□□ -0.34
DDX54-201ENST00000306014 TTC9BQ8N6N2 239 aa12.92□□□□□ -0.34
DDX54-201ENST00000306014 DPH2Q9BQC3 489 aaPredicted RBP12.92□□□□□ -0.34
DDX54-201ENST00000306014 POLR2J3Q9H1A7 115 aaKnown RBP12.92□□□□□ -0.34
DDX54-201ENST00000306014 UBFD1O14562 309 aaKnown RBP12.91□□□□□ -0.34
DDX54-201ENST00000306014 PDYNP01213 254 aa12.91□□□□□ -0.34
DDX54-201ENST00000306014 VIPP01282 170 aa12.91□□□□□ -0.34
DDX54-201ENST00000306014 PCSK2P16519 638 aa12.91□□□□□ -0.34
DDX54-201ENST00000306014 KDELR2P33947 212 aa12.91□□□□□ -0.34
DDX54-201ENST00000306014 CCT3P49368 545 aaKnown RBP12.91□□□□□ -0.34
DDX54-201ENST00000306014 HNMTP50135 292 aa12.91□□□□□ -0.34
DDX54-201ENST00000306014 TARDBPQ13148 414 aaKnown RBP eCLIP12.91□□□□□ -0.342e-9■■■■■ 31.7
DDX54-201ENST00000306014 NFATC2Q13469 925 aa12.91□□□□□ -0.34
DDX54-201ENST00000306014 CYBRD1Q53TN4 286 aa12.91□□□□□ -0.34
DDX54-201ENST00000306014 NHSL2Q5HYW2 709 aa12.91□□□□□ -0.34
DDX54-201ENST00000306014 NEK10Q6ZWH5 1172 aa12.91□□□□□ -0.34
DDX54-201ENST00000306014 CDH24Q86UP0 819 aa12.91□□□□□ -0.34
DDX54-201ENST00000306014 NT5C3BQ969T7 300 aa12.91□□□□□ -0.34
DDX54-201ENST00000306014 ACDQ96AP0 544 aa12.91□□□□□ -0.34
DDX54-201ENST00000306014 SMIM14Q96QK8 99 aa12.91□□□□□ -0.34
DDX54-201ENST00000306014 PCDHGB5Q9Y5G0 923 aa12.91□□□□□ -0.34
DDX54-201ENST00000306014 RBM47A0AV96 593 aaKnown RBP12.91□□□□□ -0.34
DDX54-201ENST00000306014 AP3D1O14617 1153 aa12.91□□□□□ -0.34
DDX54-201ENST00000306014 SLC30A4O14863 429 aa12.91□□□□□ -0.34
DDX54-201ENST00000306014 CCNYL3P0C7X3 344 aa12.91□□□□□ -0.34
DDX54-201ENST00000306014 DCTP40126 519 aa12.91□□□□□ -0.34
DDX54-201ENST00000306014 KCNC1P48547 511 aa12.91□□□□□ -0.34
DDX54-201ENST00000306014 STX4Q12846 297 aa12.91□□□□□ -0.34
DDX54-201ENST00000306014 VMACQ2NL98 169 aa12.91□□□□□ -0.34
DDX54-201ENST00000306014 CRTC2Q53ET0 693 aaPredicted RBP12.91□□□□□ -0.34
DDX54-201ENST00000306014 TXNDC8Q6A555 127 aa12.91□□□□□ -0.34
DDX54-201ENST00000306014 BHLHB9Q6PI77 547 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms