RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 ARF5P84085 180 aa5.28□□□□□ -1.56
VPS50-202ENST00000305866 CACNG1Q06432 222 aa5.28□□□□□ -1.56
VPS50-202ENST00000305866 CDK10Q15131 360 aa5.28□□□□□ -1.56
VPS50-202ENST00000305866 ZMAT1Q5H9K5 638 aa5.28□□□□□ -1.56
VPS50-202ENST00000305866 PERM1Q5SV97 790 aa5.28□□□□□ -1.56
VPS50-202ENST00000305866 TTC23Q5W5X9 447 aa5.28□□□□□ -1.56
VPS50-202ENST00000305866 VASNQ6EMK4 673 aa5.28□□□□□ -1.56
VPS50-202ENST00000305866 RSPO2Q6UXX9 243 aaPredicted RBP5.28□□□□□ -1.56
VPS50-202ENST00000305866 Q6ZPB1 254 aaPredicted RBP5.28□□□□□ -1.56
VPS50-202ENST00000305866 CBLL1Q75N03 491 aa5.28□□□□□ -1.56
VPS50-202ENST00000305866 MICU2Q8IYU8 434 aa5.28□□□□□ -1.56
VPS50-202ENST00000305866 ESAMQ96AP7 390 aa5.28□□□□□ -1.56
VPS50-202ENST00000305866 NSMCE2Q96MF7 247 aa5.28□□□□□ -1.56
VPS50-202ENST00000305866 ADAM2Q99965 735 aa5.28□□□□□ -1.56
VPS50-202ENST00000305866 MYOCQ99972 504 aa5.28□□□□□ -1.56
VPS50-202ENST00000305866 CDCA4Q9BXL8 241 aa5.28□□□□□ -1.56
VPS50-202ENST00000305866 MMP27Q9H306 513 aa5.28□□□□□ -1.56
VPS50-202ENST00000305866 RUBCNLQ9H714 662 aa5.28□□□□□ -1.56
VPS50-202ENST00000305866 HMG20AQ9NP66 347 aa5.28□□□□□ -1.56
VPS50-202ENST00000305866 PLSCR3Q9NRY6 295 aa5.28□□□□□ -1.56
VPS50-202ENST00000305866 GPRC5BQ9NZH0 403 aa5.28□□□□□ -1.56
VPS50-202ENST00000305866 PKD2L2Q9NZM6 624 aa5.28□□□□□ -1.56
VPS50-202ENST00000305866 REV1Q9UBZ9 1251 aa5.28□□□□□ -1.56
VPS50-202ENST00000305866 BTBD3Q9Y2F9 522 aa5.28□□□□□ -1.56
VPS50-202ENST00000305866 C5orf42Q9H799 3197 aa5.28□□□□□ -1.56
VPS50-202ENST00000305866 VCANP13611 3396 aa5.28□□□□□ -1.56
VPS50-202ENST00000305866 A0A075B6Q4 140 aa5.28□□□□□ -1.56
VPS50-202ENST00000305866 SYNJ2BP-COX16A0A087WUM0 186 aa5.28□□□□□ -1.56
VPS50-202ENST00000305866 ZNF840PA6NDX5 716 aa5.28□□□□□ -1.56
VPS50-202ENST00000305866 SLC38A8A6NNN8 435 aa5.28□□□□□ -1.56
VPS50-202ENST00000305866 ANGPT2O15123 496 aa5.28□□□□□ -1.56
VPS50-202ENST00000305866 PLA2G10O15496 165 aa5.28□□□□□ -1.56
VPS50-202ENST00000305866 SCELO95171 688 aa5.28□□□□□ -1.56
VPS50-202ENST00000305866 GNRH1P01148 92 aa5.28□□□□□ -1.56
VPS50-202ENST00000305866 PTHP01270 115 aa5.28□□□□□ -1.56
VPS50-202ENST00000305866 CTSAP10619 480 aa5.28□□□□□ -1.56
VPS50-202ENST00000305866 PKMP14618 531 aaKnown RBP5.28□□□□□ -1.56
VPS50-202ENST00000305866 C21orf33P30042 268 aaPredicted RBP5.28□□□□□ -1.56
VPS50-202ENST00000305866 SLC6A12P48065 614 aa5.28□□□□□ -1.56
VPS50-202ENST00000305866 B4GALNT1Q00973 533 aa5.28□□□□□ -1.56
VPS50-202ENST00000305866 RAD51Q06609 339 aa5.28□□□□□ -1.56
VPS50-202ENST00000305866 CACNB2Q08289 660 aaPredicted RBP5.28□□□□□ -1.56
VPS50-202ENST00000305866 TNK1Q13470 666 aa5.28□□□□□ -1.56
VPS50-202ENST00000305866 BAK1Q16611 211 aa5.28□□□□□ -1.56
VPS50-202ENST00000305866 MPEG1Q2M385 716 aa5.28□□□□□ -1.56
VPS50-202ENST00000305866 OTUD3Q5T2D3 398 aaPredicted RBP5.28□□□□□ -1.56
VPS50-202ENST00000305866 CCNJQ5T5M9 372 aa5.28□□□□□ -1.56
VPS50-202ENST00000305866 C1orf53Q5VUE5 145 aa5.28□□□□□ -1.56
VPS50-202ENST00000305866 ANKS6Q68DC2 871 aa5.28□□□□□ -1.56
VPS50-202ENST00000305866 THOC7Q6I9Y2 204 aaKnown RBP5.28□□□□□ -1.56
VPS50-202ENST00000305866 RGMBQ6NW40 437 aa5.28□□□□□ -1.56
VPS50-202ENST00000305866 SCIMPQ6UWF3 145 aa5.28□□□□□ -1.56
VPS50-202ENST00000305866 TMEM150AQ86TG1 271 aa5.28□□□□□ -1.56
VPS50-202ENST00000305866 RNF135Q8IUD6 432 aa5.28□□□□□ -1.56
VPS50-202ENST00000305866 CYP4Z2PQ8N1L4 340 aa5.28□□□□□ -1.56
VPS50-202ENST00000305866 TMCO5AQ8N6Q1 288 aa5.28□□□□□ -1.56
VPS50-202ENST00000305866 SIDT2Q8NBJ9 832 aaKnown RBP5.28□□□□□ -1.56
VPS50-202ENST00000305866 OR56A4Q8NGH8 313 aa5.28□□□□□ -1.56
VPS50-202ENST00000305866 OR10A6Q8NH74 314 aa5.28□□□□□ -1.56
VPS50-202ENST00000305866 SLC38A4Q969I6 547 aa5.28□□□□□ -1.56
VPS50-202ENST00000305866 WDR34Q96EX3 536 aa5.28□□□□□ -1.56
VPS50-202ENST00000305866 TIMP4Q99727 224 aa5.28□□□□□ -1.56
VPS50-202ENST00000305866 ACTR8Q9H981 624 aa5.28□□□□□ -1.56
VPS50-202ENST00000305866 HHATLQ9HCP6 504 aa5.28□□□□□ -1.56
VPS50-202ENST00000305866 NT5MQ9NPB1 228 aa5.28□□□□□ -1.56
VPS50-202ENST00000305866 RLIMQ9NVW2 624 aa5.28□□□□□ -1.56
VPS50-202ENST00000305866 COX16Q9P0S2 106 aa5.28□□□□□ -1.56
VPS50-202ENST00000305866 KCND3Q9UK17 655 aa5.28□□□□□ -1.56
VPS50-202ENST00000305866 NUDT5Q9UKK9 219 aa5.28□□□□□ -1.56
VPS50-202ENST00000305866 PADI2Q9Y2J8 665 aa5.28□□□□□ -1.56
VPS50-202ENST00000305866 TIMM13Q9Y5L4 95 aaPredicted RBP5.28□□□□□ -1.56
VPS50-202ENST00000305866 SLC12A8A0AV02 714 aa5.28□□□□□ -1.56
VPS50-202ENST00000305866 TMEM88BA6NKF7 163 aa5.28□□□□□ -1.56
VPS50-202ENST00000305866 ANKRD66B4E2M5 251 aa5.28□□□□□ -1.56
VPS50-202ENST00000305866 WASH3PC4AMC7 463 aa5.28□□□□□ -1.56
VPS50-202ENST00000305866 ARVCFO00192 962 aa5.28□□□□□ -1.56
VPS50-202ENST00000305866 PRMT3O60678 531 aa5.28□□□□□ -1.56
VPS50-202ENST00000305866 LILRB3O75022 631 aa5.28□□□□□ -1.56
VPS50-202ENST00000305866 AOC2O75106 756 aa5.28□□□□□ -1.56
VPS50-202ENST00000305866 NIPSNAP2O75323 286 aa5.28□□□□□ -1.56
VPS50-202ENST00000305866 GPX5O75715 221 aa5.28□□□□□ -1.56
VPS50-202ENST00000305866 ALX3O95076 343 aa5.28□□□□□ -1.56
VPS50-202ENST00000305866 ASGR1P07306 291 aa5.28□□□□□ -1.56
VPS50-202ENST00000305866 EBLN1P0CF75 366 aa5.28□□□□□ -1.56
VPS50-202ENST00000305866 MYCLP1P12525 358 aaPredicted RBP5.28□□□□□ -1.56
VPS50-202ENST00000305866 LPOP22079 712 aaPredicted RBP5.28□□□□□ -1.56
VPS50-202ENST00000305866 MAP4P27816 1152 aaKnown RBP5.28□□□□□ -1.56
VPS50-202ENST00000305866 GPR15P49685 360 aa5.28□□□□□ -1.56
VPS50-202ENST00000305866 TPTEP56180 551 aa5.28□□□□□ -1.56
VPS50-202ENST00000305866 AP1S1P61966 158 aa5.28□□□□□ -1.56
VPS50-202ENST00000305866 SPANXN4Q5MJ08 99 aa5.28□□□□□ -1.56
VPS50-202ENST00000305866 TMEM201Q5SNT2 666 aa5.28□□□□□ -1.56
VPS50-202ENST00000305866 MFSD14CQ5VZR4 134 aa5.28□□□□□ -1.56
VPS50-202ENST00000305866 LHX8Q68G74 356 aa5.28□□□□□ -1.56
VPS50-202ENST00000305866 SAPCD2Q86UD0 394 aa5.28□□□□□ -1.56
VPS50-202ENST00000305866 PSMA8Q8TAA3 256 aa5.28□□□□□ -1.56
VPS50-202ENST00000305866 C17orf50Q8WW18 174 aa5.28□□□□□ -1.56
VPS50-202ENST00000305866 SLC13A3Q8WWT9 602 aa5.28□□□□□ -1.56
VPS50-202ENST00000305866 MSLNLQ96KJ4 702 aa5.28□□□□□ -1.56
VPS50-202ENST00000305866 OPALINQ96PE5 141 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms