RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 CDH1P12830 882 aa9.12□□□□□ -0.95
RFX3-201ENST00000302303 ST6GAL1P15907 406 aa9.12□□□□□ -0.95
RFX3-201ENST00000302303 EPB42P16452 691 aa9.12□□□□□ -0.95
RFX3-201ENST00000302303 MAGP20916 626 aa9.12□□□□□ -0.95
RFX3-201ENST00000302303 CSRP1P21291 193 aaKnown RBP9.12□□□□□ -0.95
RFX3-201ENST00000302303 CCND1P24385 295 aa9.12□□□□□ -0.95
RFX3-201ENST00000302303 MPSTP25325 297 aa9.12□□□□□ -0.95
RFX3-201ENST00000302303 VARSP26640 1264 aaKnown RBP9.12□□□□□ -0.95
RFX3-201ENST00000302303 FOXA1P55317 472 aa9.12□□□□□ -0.95
RFX3-201ENST00000302303 CLDN6P56747 220 aa9.12□□□□□ -0.95
RFX3-201ENST00000302303 INSM1Q01101 510 aaPredicted RBP9.12□□□□□ -0.95
RFX3-201ENST00000302303 OCRLQ01968 901 aa9.12□□□□□ -0.95
RFX3-201ENST00000302303 GUCY1A3Q02108 690 aa9.12□□□□□ -0.95
RFX3-201ENST00000302303 GALNT1Q10472 559 aaPredicted RBP9.12□□□□□ -0.95
RFX3-201ENST00000302303 GPS2Q13227 327 aa9.12□□□□□ -0.95
RFX3-201ENST00000302303 DOC2AQ14183 400 aa9.12□□□□□ -0.95
RFX3-201ENST00000302303 SF1Q15637 639 aaKnown RBP9.12□□□□□ -0.95
RFX3-201ENST00000302303 UGT3A2Q3SY77 523 aa9.12□□□□□ -0.95
RFX3-201ENST00000302303 CDCP2Q5VXM1 449 aa9.12□□□□□ -0.95
RFX3-201ENST00000302303 TMEM71Q6P5X7 295 aa9.12□□□□□ -0.95
RFX3-201ENST00000302303 NXPE4Q6UWF7 544 aa9.12□□□□□ -0.95
RFX3-201ENST00000302303 RGS9BPQ6ZS82 235 aa9.12□□□□□ -0.95
RFX3-201ENST00000302303 FAM92BQ6ZTR7 304 aa9.12□□□□□ -0.95
RFX3-201ENST00000302303 ARHGAP22Q7Z5H3 698 aa9.12□□□□□ -0.95
RFX3-201ENST00000302303 B3GNT8Q7Z7M8 397 aa9.12□□□□□ -0.95
RFX3-201ENST00000302303 PAQR7Q86WK9 346 aa9.12□□□□□ -0.95
RFX3-201ENST00000302303 CCNYL1Q8N7R7 359 aa9.12□□□□□ -0.95
RFX3-201ENST00000302303 DCBLD1Q8N8Z6 715 aa9.12□□□□□ -0.95
RFX3-201ENST00000302303 L3MBTL4Q8NA19 623 aa9.12□□□□□ -0.95
RFX3-201ENST00000302303 AGAP11Q8TF27 550 aa9.12□□□□□ -0.95
RFX3-201ENST00000302303 CNDP1Q96KN2 507 aa9.12□□□□□ -0.95
RFX3-201ENST00000302303 TGM7Q96PF1 710 aa9.12□□□□□ -0.95
RFX3-201ENST00000302303 SARGQ9BW04 601 aa9.12□□□□□ -0.95
RFX3-201ENST00000302303 KLHL25Q9H0H3 589 aa9.12□□□□□ -0.95
RFX3-201ENST00000302303 PCBD2Q9H0N5 130 aa9.12□□□□□ -0.95
RFX3-201ENST00000302303 ABCF3Q9NUQ8 709 aa9.12□□□□□ -0.95
RFX3-201ENST00000302303 GPRC5BQ9NZH0 403 aa9.12□□□□□ -0.95
RFX3-201ENST00000302303 HAO1Q9UJM8 370 aa9.12□□□□□ -0.95
RFX3-201ENST00000302303 RNF11Q9Y3C5 154 aa9.12□□□□□ -0.95
RFX3-201ENST00000302303 PTPRZ1P23471 2315 aaPredicted RBP9.12□□□□□ -0.95
RFX3-201ENST00000302303 A0A0J9YY10 115 aa9.11□□□□□ -0.95
RFX3-201ENST00000302303 SPAARA0A1B0GVQ0 90 aa9.11□□□□□ -0.95
RFX3-201ENST00000302303 GSAPA4D1B5 854 aa9.11□□□□□ -0.95
RFX3-201ENST00000302303 SLC9B1P1A6NJY1 282 aa9.11□□□□□ -0.95
RFX3-201ENST00000302303 H3BMH7 237 aa9.11□□□□□ -0.95
RFX3-201ENST00000302303 H7BY64 318 aa9.11□□□□□ -0.95
RFX3-201ENST00000302303 DUX1O43812 170 aa9.11□□□□□ -0.95
RFX3-201ENST00000302303 CPNE6O95741 557 aa9.11□□□□□ -0.95
RFX3-201ENST00000302303 CTSBP07858 339 aa9.11□□□□□ -0.95
RFX3-201ENST00000302303 C1GALT1C1LP0DN25 315 aa9.11□□□□□ -0.95
RFX3-201ENST00000302303 MDH1P40925 334 aaKnown RBP9.11□□□□□ -0.95
RFX3-201ENST00000302303 SNRPNP63162 240 aaKnown RBP9.11□□□□□ -0.95
RFX3-201ENST00000302303 ABATP80404 500 aa9.11□□□□□ -0.95
RFX3-201ENST00000302303 MEF2AQ02078 507 aaPredicted RBP9.11□□□□□ -0.95
RFX3-201ENST00000302303 CHIT1Q13231 466 aa9.11□□□□□ -0.95
RFX3-201ENST00000302303 ILKQ13418 452 aa9.11□□□□□ -0.95
RFX3-201ENST00000302303 BIRC2Q13490 618 aa9.11□□□□□ -0.95
RFX3-201ENST00000302303 TSTA3Q13630 321 aaPredicted RBP9.11□□□□□ -0.95
RFX3-201ENST00000302303 RCN2Q14257 317 aa9.11□□□□□ -0.95
RFX3-201ENST00000302303 TBCCQ15814 346 aa9.11□□□□□ -0.95
RFX3-201ENST00000302303 ATG9BQ674R7 924 aa9.11□□□□□ -0.95
RFX3-201ENST00000302303 ADNP2Q6IQ32 1131 aa9.11□□□□□ -0.95
RFX3-201ENST00000302303 IRGCQ6NXR0 463 aa9.11□□□□□ -0.95
RFX3-201ENST00000302303 KLHL35Q6PF15 583 aa9.11□□□□□ -0.95
RFX3-201ENST00000302303 FIGLAQ6QHK4 219 aa9.11□□□□□ -0.95
RFX3-201ENST00000302303 VN1R5Q7Z5H4 357 aa9.11□□□□□ -0.95
RFX3-201ENST00000302303 RAB42Q8N4Z0 105 aa9.11□□□□□ -0.95
RFX3-201ENST00000302303 ANKRD53Q8N9V6 530 aa9.11□□□□□ -0.95
RFX3-201ENST00000302303 OR4F6Q8NGB9 312 aa9.11□□□□□ -0.95
RFX3-201ENST00000302303 OR4D9Q8NGE8 314 aa9.11□□□□□ -0.95
RFX3-201ENST00000302303 FAM76AQ8TAV0 307 aa9.11□□□□□ -0.95
RFX3-201ENST00000302303 SLC5A11Q8WWX8 675 aa9.11□□□□□ -0.95
RFX3-201ENST00000302303 KLHL6Q8WZ60 621 aa9.11□□□□□ -0.95
RFX3-201ENST00000302303 SLC22A18Q96BI1 424 aa9.11□□□□□ -0.95
RFX3-201ENST00000302303 PRAP1Q96NZ9 151 aa9.11□□□□□ -0.95
RFX3-201ENST00000302303 FCRL4Q96PJ5 515 aa9.11□□□□□ -0.95
RFX3-201ENST00000302303 ZNF382Q96SR6 550 aa9.11□□□□□ -0.95
RFX3-201ENST00000302303 PLCD4Q9BRC7 762 aa9.11□□□□□ -0.95
RFX3-201ENST00000302303 HAUS8Q9BT25 410 aa9.11□□□□□ -0.95
RFX3-201ENST00000302303 DPH7Q9BTV6 452 aa9.11□□□□□ -0.95
RFX3-201ENST00000302303 SHCBP1LQ9BZQ2 653 aa9.11□□□□□ -0.95
RFX3-201ENST00000302303 EHD1Q9H4M9 534 aa9.11□□□□□ -0.95
RFX3-201ENST00000302303 CCDC134Q9H6E4 229 aa9.11□□□□□ -0.95
RFX3-201ENST00000302303 MANSC1Q9H8J5 431 aa9.11□□□□□ -0.95
RFX3-201ENST00000302303 MRPS30Q9NP92 439 aaKnown RBP9.11□□□□□ -0.95
RFX3-201ENST00000302303 SLCO1B3Q9NPD5 702 aa9.11□□□□□ -0.95
RFX3-201ENST00000302303 C1GALT1Q9NS00 363 aa9.11□□□□□ -0.95
RFX3-201ENST00000302303 GEMIN8Q9NWZ8 242 aaKnown RBP9.11□□□□□ -0.95
RFX3-201ENST00000302303 ZDHHC2Q9UIJ5 367 aa9.11□□□□□ -0.95
RFX3-201ENST00000302303 PCDHGA1Q9Y5H4 931 aa9.11□□□□□ -0.95
RFX3-201ENST00000302303 KCNE2Q9Y6J6 123 aa9.11□□□□□ -0.95
RFX3-201ENST00000302303 A0A1W2PNU3 283 aaPredicted RBP9.1□□□□□ -0.95
RFX3-201ENST00000302303 TLCD2A6NGC4 264 aa9.1□□□□□ -0.95
RFX3-201ENST00000302303 TMEM233B4DJY2 109 aa9.1□□□□□ -0.95
RFX3-201ENST00000302303 D6RAR5 112 aa9.1□□□□□ -0.95
RFX3-201ENST00000302303 MATN2O00339 956 aa9.1□□□□□ -0.95
RFX3-201ENST00000302303 RFPL3O75679 317 aa9.1□□□□□ -0.95
RFX3-201ENST00000302303 OR4F21O95013 312 aa9.1□□□□□ -0.95
RFX3-201ENST00000302303 ESRRBO95718 433 aa9.1□□□□□ -0.95
RFX3-201ENST00000302303 FGF4P08620 206 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms