RNA–Protein interactions for RNA: ENST00000302278.7

ITGB1-201, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ITGB1, Length 3,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-201ENST00000302278 BEST3Q8N1M1 668 aa6.11□□□□□ -1.43
ITGB1-201ENST00000302278 FBXO15Q8NCQ5 510 aaPredicted RBP6.11□□□□□ -1.43
ITGB1-201ENST00000302278 NAT14Q8WUY8 206 aa6.11□□□□□ -1.43
ITGB1-201ENST00000302278 ELMO1Q92556 727 aa6.11□□□□□ -1.43
ITGB1-201ENST00000302278 P3H4Q92791 437 aa6.11□□□□□ -1.43
ITGB1-201ENST00000302278 DNAJC1Q96KC8 554 aaKnown RBP6.11□□□□□ -1.43
ITGB1-201ENST00000302278 OR2A5Q96R48 311 aa6.11□□□□□ -1.43
ITGB1-201ENST00000302278 PLCD4Q9BRC7 762 aa6.11□□□□□ -1.43
ITGB1-201ENST00000302278 TSSK1BQ9BXA7 367 aa6.11□□□□□ -1.43
ITGB1-201ENST00000302278 PACSIN1Q9BY11 444 aa6.11□□□□□ -1.43
ITGB1-201ENST00000302278 SYNPO2LQ9H987 977 aa6.11□□□□□ -1.43
ITGB1-201ENST00000302278 ZNF358Q9NW07 568 aa6.11□□□□□ -1.43
ITGB1-201ENST00000302278 HEATR5BQ9P2D3 2071 aa6.11□□□□□ -1.43
ITGB1-201ENST00000302278 LOC105369274A0A096LPK9 316 aa6.11□□□□□ -1.43
ITGB1-201ENST00000302278 IGKV1-8A0A0C4DH67 115 aa6.11□□□□□ -1.43
ITGB1-201ENST00000302278 LOC102723532A0A0G2JNH3 316 aa6.11□□□□□ -1.43
ITGB1-201ENST00000302278 A0A1B0GVC2 190 aa6.11□□□□□ -1.43
ITGB1-201ENST00000302278 CST8O60676 142 aa6.11□□□□□ -1.43
ITGB1-201ENST00000302278 CTAG2O75638 210 aa6.11□□□□□ -1.43
ITGB1-201ENST00000302278 MATN4O95460 622 aa6.11□□□□□ -1.43
ITGB1-201ENST00000302278 C1orf105O95561 183 aa6.11□□□□□ -1.43
ITGB1-201ENST00000302278 DRD2P14416 443 aa6.11□□□□□ -1.43
ITGB1-201ENST00000302278 CD96P40200 585 aa6.11□□□□□ -1.43
ITGB1-201ENST00000302278 SSR1P43307 286 aaKnown RBP6.11□□□□□ -1.43
ITGB1-201ENST00000302278 MPP1Q00013 466 aa6.11□□□□□ -1.43
ITGB1-201ENST00000302278 OLIG2Q13516 323 aa6.11□□□□□ -1.43
ITGB1-201ENST00000302278 ANKRD20A2Q5SQ80 823 aa6.11□□□□□ -1.43
ITGB1-201ENST00000302278 ANKRD20A1Q5TYW2 823 aa6.11□□□□□ -1.43
ITGB1-201ENST00000302278 ANKRD20A3Q5VUR7 823 aa6.11□□□□□ -1.43
ITGB1-201ENST00000302278 SASS6Q6UVJ0 657 aa6.11□□□□□ -1.43
ITGB1-201ENST00000302278 KIAA0408Q6ZU52 694 aa6.11□□□□□ -1.43
ITGB1-201ENST00000302278 NEK10Q6ZWH5 1172 aa6.11□□□□□ -1.43
ITGB1-201ENST00000302278 CPEB2Q7Z5Q1 589 aaKnown RBP6.11□□□□□ -1.43
ITGB1-201ENST00000302278 CRLF3Q8IUI8 442 aa6.11□□□□□ -1.43
ITGB1-201ENST00000302278 RCOR2Q8IZ40 523 aa6.11□□□□□ -1.43
ITGB1-201ENST00000302278 OR4N4Q8N0Y3 316 aa6.11□□□□□ -1.43
ITGB1-201ENST00000302278 HORMAD2Q8N7B1 307 aa6.11□□□□□ -1.43
ITGB1-201ENST00000302278 PLPP5Q8NEB5 264 aa6.11□□□□□ -1.43
ITGB1-201ENST00000302278 SPATA13Q96N96 652 aa6.11□□□□□ -1.43
ITGB1-201ENST00000302278 P2RY12Q9H244 342 aa6.11□□□□□ -1.43
ITGB1-201ENST00000302278 FAM96AQ9H5X1 160 aa6.11□□□□□ -1.43
ITGB1-201ENST00000302278 STMN3Q9NZ72 180 aa6.11□□□□□ -1.43
ITGB1-201ENST00000302278 MYO1CO00159 1063 aa6.11□□□□□ -1.43
ITGB1-201ENST00000302278 CD46P15529 392 aa6.11□□□□□ -1.43
ITGB1-201ENST00000302278 GJC1P36383 396 aa6.11□□□□□ -1.43
ITGB1-201ENST00000302278 OR1C1Q15619 314 aa6.11□□□□□ -1.43
ITGB1-201ENST00000302278 SHISA6Q6ZSJ9 500 aa6.11□□□□□ -1.43
ITGB1-201ENST00000302278 ANKRD37Q7Z713 158 aa6.11□□□□□ -1.43
ITGB1-201ENST00000302278 VRK3Q8IV63 474 aa6.11□□□□□ -1.43
ITGB1-201ENST00000302278 CPSF7Q8N684 471 aaKnown RBP6.11□□□□□ -1.43
ITGB1-201ENST00000302278 CLDN19Q8N6F1 224 aa6.11□□□□□ -1.43
ITGB1-201ENST00000302278 FAM98AQ8NCA5 519 aaKnown RBP6.11□□□□□ -1.43
ITGB1-201ENST00000302278 OR13J1Q8NGT2 312 aa6.11□□□□□ -1.43
ITGB1-201ENST00000302278 CA5BP1Q8WTZ4 195 aa6.11□□□□□ -1.43
ITGB1-201ENST00000302278 NAT10Q9H0A0 1025 aaKnown RBP6.11□□□□□ -1.43
ITGB1-201ENST00000302278 C19orf25Q9UFG5 118 aaPredicted RBP6.11□□□□□ -1.43
ITGB1-201ENST00000302278 PLAGL1Q9UM63 463 aa6.11□□□□□ -1.43
ITGB1-201ENST00000302278 PPIEQ9UNP9 301 aaKnown RBP6.11□□□□□ -1.43
ITGB1-201ENST00000302278 RUVBL1Q9Y265 456 aaKnown RBP6.11□□□□□ -1.43
ITGB1-201ENST00000302278 HRH3Q9Y5N1 445 aa6.11□□□□□ -1.43
ITGB1-201ENST00000302278 MYO7BQ6PIF6 2116 aa6.11□□□□□ -1.43
ITGB1-201ENST00000302278 SEC16AO15027 2179 aa6.11□□□□□ -1.43
ITGB1-201ENST00000302278 HRNRQ86YZ3 2850 aaPredicted RBP6.1□□□□□ -1.43
ITGB1-201ENST00000302278 NSA2O95478 260 aaKnown RBP6.1□□□□□ -1.43
ITGB1-201ENST00000302278 HEXBP07686 556 aa6.1□□□□□ -1.43
ITGB1-201ENST00000302278 C8orf89P0DMQ9 161 aa6.1□□□□□ -1.43
ITGB1-201ENST00000302278 TFEBP19484 476 aa6.1□□□□□ -1.43
ITGB1-201ENST00000302278 CXCR2P25025 360 aa6.1□□□□□ -1.43
ITGB1-201ENST00000302278 VSX2P58304 361 aaPredicted RBP6.1□□□□□ -1.43
ITGB1-201ENST00000302278 PRPSAP1Q14558 356 aa6.1□□□□□ -1.43
ITGB1-201ENST00000302278 FBXL19-AS1Q494R0 122 aa6.1□□□□□ -1.43
ITGB1-201ENST00000302278 RNFT1Q5M7Z0 435 aa6.1□□□□□ -1.43
ITGB1-201ENST00000302278 ARMC3Q5W041 872 aa6.1□□□□□ -1.43
ITGB1-201ENST00000302278 SLC25A25Q6KCM7 469 aa6.1□□□□□ -1.43
ITGB1-201ENST00000302278 CDKL3Q8IVW4 592 aaPredicted RBP6.1□□□□□ -1.43
ITGB1-201ENST00000302278 DTWD1Q8N5C7 304 aa6.1□□□□□ -1.43
ITGB1-201ENST00000302278 CPLX3Q8WVH0 158 aa6.1□□□□□ -1.43
ITGB1-201ENST00000302278 TM4SF19Q96DZ7 209 aa6.1□□□□□ -1.43
ITGB1-201ENST00000302278 ZNF559Q9BR84 538 aa6.1□□□□□ -1.43
ITGB1-201ENST00000302278 VN1R1Q9GZP7 353 aa6.1□□□□□ -1.43
ITGB1-201ENST00000302278 TP63Q9H3D4 680 aaPredicted RBP6.1□□□□□ -1.43
ITGB1-201ENST00000302278 RYDENQ9NUL5 291 aaKnown RBP6.1□□□□□ -1.43
ITGB1-201ENST00000302278 SAE1Q9UBE0 346 aaPredicted RBP6.1□□□□□ -1.43
ITGB1-201ENST00000302278 MAU2Q9Y6X3 613 aa6.1□□□□□ -1.43
ITGB1-201ENST00000302278 PRRG2O14669 202 aa6.1□□□□□ -1.43
ITGB1-201ENST00000302278 VPS26AO75436 327 aa6.1□□□□□ -1.43
ITGB1-201ENST00000302278 SUN1O94901 812 aa6.1□□□□□ -1.43
ITGB1-201ENST00000302278 PRSS56P0CW18 603 aa6.1□□□□□ -1.43
ITGB1-201ENST00000302278 PSMB4P28070 264 aa6.1□□□□□ -1.43
ITGB1-201ENST00000302278 ADAM8P78325 824 aa6.1□□□□□ -1.43
ITGB1-201ENST00000302278 RHAGQ02094 409 aa6.1□□□□□ -1.43
ITGB1-201ENST00000302278 DAZAP2Q15038 168 aaPredicted RBP6.1□□□□□ -1.43
ITGB1-201ENST00000302278 FAM182AQ5T1J6 154 aa6.1□□□□□ -1.43
ITGB1-201ENST00000302278 C11orf63Q6NUN7 778 aa6.1□□□□□ -1.43
ITGB1-201ENST00000302278 ACAD11Q709F0 780 aa6.1□□□□□ -1.43
ITGB1-201ENST00000302278 LRRC6Q86X45 466 aa6.1□□□□□ -1.43
ITGB1-201ENST00000302278 LRRC56Q8IYG6 542 aaPredicted RBP6.1□□□□□ -1.43
ITGB1-201ENST00000302278 DNAAF3Q8N9W5 541 aa6.1□□□□□ -1.43
ITGB1-201ENST00000302278 ZFP62Q8NB50 900 aaPredicted RBP6.1□□□□□ -1.43
ITGB1-201ENST00000302278 ASZ1Q8WWH4 475 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms