RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 LCTLQ6UWM7 567 aa21.52■■□□□ 1.04
SMAD1-201ENST00000302085 Q6ZS52 159 aa21.52■■□□□ 1.04
SMAD1-201ENST00000302085 TBC1D21Q8IYX1 336 aa21.52■■□□□ 1.04
SMAD1-201ENST00000302085 OR2T34Q8NGX1 318 aa21.52■■□□□ 1.04
SMAD1-201ENST00000302085 HMGB4Q8WW32 186 aa21.52■■□□□ 1.04
SMAD1-201ENST00000302085 SLC13A3Q8WWT9 602 aa21.52■■□□□ 1.04
SMAD1-201ENST00000302085 TSSK3Q96PN8 268 aa21.52■■□□□ 1.04
SMAD1-201ENST00000302085 EFCAB11Q9BUY7 163 aa21.52■■□□□ 1.04
SMAD1-201ENST00000302085 SCAMP1O15126 338 aa21.51■■□□□ 1.03
SMAD1-201ENST00000302085 KCNJ13O60928 360 aa21.51■■□□□ 1.03
SMAD1-201ENST00000302085 PHC1P78364 1004 aa21.51■■□□□ 1.03
SMAD1-201ENST00000302085 PRAMEF14Q5SWL7 426 aa21.51■■□□□ 1.03
SMAD1-201ENST00000302085 PRAMEF13Q5VWM6 474 aa21.51■■□□□ 1.03
SMAD1-201ENST00000302085 HID1Q8IV36 788 aa21.51■■□□□ 1.03
SMAD1-201ENST00000302085 FLCNQ8NFG4 579 aa21.51■■□□□ 1.03
SMAD1-201ENST00000302085 C11orf24Q96F05 449 aaPredicted RBP21.51■■□□□ 1.03
SMAD1-201ENST00000302085 EGLN2Q96KS0 407 aa21.51■■□□□ 1.03
SMAD1-201ENST00000302085 BMFQ96LC9 184 aa21.51■■□□□ 1.03
SMAD1-201ENST00000302085 C12orf66Q96MD2 445 aa21.51■■□□□ 1.03
SMAD1-201ENST00000302085 TMEM74Q96NL1 305 aa21.51■■□□□ 1.03
SMAD1-201ENST00000302085 FERD3LQ96RJ6 166 aa21.51■■□□□ 1.03
SMAD1-201ENST00000302085 SPNS1Q9H2V7 528 aa21.51■■□□□ 1.03
SMAD1-201ENST00000302085 NMRK1Q9NWW6 199 aa21.51■■□□□ 1.03
SMAD1-201ENST00000302085 A0A1W2PPC1 479 aa21.5■■□□□ 1.03
SMAD1-201ENST00000302085 H0Y8X5 98 aa21.5■■□□□ 1.03
SMAD1-201ENST00000302085 PGRP06401 933 aa21.5■■□□□ 1.03
SMAD1-201ENST00000302085 KIAA1024LP59773 190 aa21.5■■□□□ 1.03
SMAD1-201ENST00000302085 PLIN5Q00G26 463 aa21.5■■□□□ 1.03
SMAD1-201ENST00000302085 TDGQ13569 410 aa21.5■■□□□ 1.03
SMAD1-201ENST00000302085 CLCA4Q14CN2 919 aa21.5■■□□□ 1.03
SMAD1-201ENST00000302085 SMAD2Q15796 467 aaKnown RBP21.5■■□□□ 1.03
SMAD1-201ENST00000302085 SPATS1Q496A3 300 aa21.5■■□□□ 1.03
SMAD1-201ENST00000302085 SPATA24Q86W54 205 aa21.5■■□□□ 1.03
SMAD1-201ENST00000302085 RIMKLAQ8IXN7 391 aa21.5■■□□□ 1.03
SMAD1-201ENST00000302085 LAS2Q8IYD9 372 aa21.5■■□□□ 1.03
SMAD1-201ENST00000302085 GTF2H4Q92759 462 aa21.5■■□□□ 1.03
SMAD1-201ENST00000302085 EBPLQ9BY08 206 aa21.5■■□□□ 1.03
SMAD1-201ENST00000302085 PPT2Q9UMR5 302 aa21.5■■□□□ 1.03
SMAD1-201ENST00000302085 NVLO15381 856 aaKnown RBP21.5■■□□□ 1.03
SMAD1-201ENST00000302085 SH3BGRLO75368 114 aa21.5■■□□□ 1.03
SMAD1-201ENST00000302085 HSD17B2P37059 387 aa21.5■■□□□ 1.03
SMAD1-201ENST00000302085 MEF2AQ02078 507 aaPredicted RBP21.5■■□□□ 1.03
SMAD1-201ENST00000302085 SF1Q15637 639 aaKnown RBP21.5■■□□□ 1.03
SMAD1-201ENST00000302085 TPRG1LQ5T0D9 272 aa21.5■■□□□ 1.03
SMAD1-201ENST00000302085 ZFP1Q6P2D0 407 aa21.5■■□□□ 1.03
SMAD1-201ENST00000302085 DENND6BQ8NEG7 585 aa21.5■■□□□ 1.03
SMAD1-201ENST00000302085 REPS1Q96D71 796 aa21.5■■□□□ 1.03
SMAD1-201ENST00000302085 PPM1MQ96MI6 270 aa21.5■■□□□ 1.03
SMAD1-201ENST00000302085 HAUS8Q9BT25 410 aa21.5■■□□□ 1.03
SMAD1-201ENST00000302085 NEUROG3Q9Y4Z2 214 aa21.5■■□□□ 1.03
SMAD1-201ENST00000302085 PRSS38A1L453 326 aa21.49■■□□□ 1.03
SMAD1-201ENST00000302085 PIPSLA2A3N6 862 aa21.49■■□□□ 1.03
SMAD1-201ENST00000302085 LRRC72A6NJI9 287 aa21.49■■□□□ 1.03
SMAD1-201ENST00000302085 FPGTO14772 594 aa21.49■■□□□ 1.03
SMAD1-201ENST00000302085 CDH1P12830 882 aa21.49■■□□□ 1.03
SMAD1-201ENST00000302085 RPS13P62277 151 aaKnown RBP21.49■■□□□ 1.03
SMAD1-201ENST00000302085 LIPEQ05469 1076 aa21.49■■□□□ 1.03
SMAD1-201ENST00000302085 PAGE2BQ5JRK9 111 aa21.49■■□□□ 1.03
SMAD1-201ENST00000302085 CYP2R1Q6VVX0 501 aa21.49■■□□□ 1.03
SMAD1-201ENST00000302085 DHFR2Q86XF0 187 aa21.49■■□□□ 1.03
SMAD1-201ENST00000302085 FAM9CQ8IZT9 166 aa21.49■■□□□ 1.03
SMAD1-201ENST00000302085 CHTF18Q8WVB6 975 aa21.49■■□□□ 1.03
SMAD1-201ENST00000302085 OR52E6Q96RD3 313 aa21.49■■□□□ 1.03
SMAD1-201ENST00000302085 CGREF1Q99674 301 aa21.49■■□□□ 1.03
SMAD1-201ENST00000302085 LRATO95237 230 aa21.48■■□□□ 1.03
SMAD1-201ENST00000302085 C8BP07358 591 aa21.48■■□□□ 1.03
SMAD1-201ENST00000302085 PCSK2P16519 638 aa21.48■■□□□ 1.03
SMAD1-201ENST00000302085 IDSP22304 550 aa21.48■■□□□ 1.03
SMAD1-201ENST00000302085 GSK3BP49841 420 aa21.48■■□□□ 1.03
SMAD1-201ENST00000302085 CLNS1AP54105 237 aaKnown RBP21.48■■□□□ 1.03
SMAD1-201ENST00000302085 EEFSECP57772 596 aaKnown RBP21.48■■□□□ 1.03
SMAD1-201ENST00000302085 MAPKAPK3Q16644 382 aa21.48■■□□□ 1.03
SMAD1-201ENST00000302085 HIST2H2ACQ16777 129 aaPredicted RBP21.48■■□□□ 1.03
SMAD1-201ENST00000302085 HIST2H2AA3Q6FI13 130 aa21.48■■□□□ 1.03
SMAD1-201ENST00000302085 ENPP7Q6UWV6 458 aa21.48■■□□□ 1.03
SMAD1-201ENST00000302085 PRR23BQ6ZRT6 265 aa21.48■■□□□ 1.03
SMAD1-201ENST00000302085 ZNF740Q8NDX6 193 aa21.48■■□□□ 1.03
SMAD1-201ENST00000302085 OR1E3Q8WZA6 343 aa21.48■■□□□ 1.03
SMAD1-201ENST00000302085 METTL2AQ96IZ6 378 aaKnown RBP21.48■■□□□ 1.03
SMAD1-201ENST00000302085 CAMK1GQ96NX5 476 aa21.48■■□□□ 1.03
SMAD1-201ENST00000302085 ACAT2Q9BWD1 397 aa21.48■■□□□ 1.03
SMAD1-201ENST00000302085 CARS2Q9HA77 564 aaKnown RBP21.48■■□□□ 1.03
SMAD1-201ENST00000302085 SPATA7Q9P0W8 599 aa21.48■■□□□ 1.03
SMAD1-201ENST00000302085 USP36Q9P275 1121 aaKnown RBP21.48■■□□□ 1.03
SMAD1-201ENST00000302085 RUVBL1Q9Y265 456 aaKnown RBP21.48■■□□□ 1.03
SMAD1-201ENST00000302085 A0A1W2PPV9 198 aa21.48■■□□□ 1.03
SMAD1-201ENST00000302085 C10orf142B7Z368 130 aa21.48■■□□□ 1.03
SMAD1-201ENST00000302085 FOXE1O00358 373 aaPredicted RBP21.48■■□□□ 1.03
SMAD1-201ENST00000302085 CHRNB1P11230 501 aa21.48■■□□□ 1.03
SMAD1-201ENST00000302085 RAE1P78406 368 aaKnown RBP21.48■■□□□ 1.03
SMAD1-201ENST00000302085 ACSM2AQ08AH3 577 aa21.48■■□□□ 1.03
SMAD1-201ENST00000302085 LAPTM5Q13571 262 aa21.48■■□□□ 1.03
SMAD1-201ENST00000302085 NFATC4Q14934 902 aa21.48■■□□□ 1.03
SMAD1-201ENST00000302085 ACSM2BQ68CK6 577 aa21.48■■□□□ 1.03
SMAD1-201ENST00000302085 ZUFSPQ96AP4 578 aa21.48■■□□□ 1.03
SMAD1-201ENST00000302085 TESCQ96BS2 214 aa21.48■■□□□ 1.03
SMAD1-201ENST00000302085 RSRC1Q96IZ7 334 aaKnown RBP21.48■■□□□ 1.03
SMAD1-201ENST00000302085 HHIPQ96QV1 700 aa21.48■■□□□ 1.03
SMAD1-201ENST00000302085 PRDM8Q9NQV8 689 aa21.48■■□□□ 1.03
SMAD1-201ENST00000302085 IMP3Q9NV31 184 aaKnown RBP21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms