RNA–Protein interactions for RNA: ENST00000300302.9

HERPUD1-201, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERPUD1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-201ENST00000300302 ABRAXAS1Q6UWZ7 409 aa15.17■□□□□ 0.02
HERPUD1-201ENST00000300302 C17orf64Q86WR6 236 aa15.17■□□□□ 0.02
HERPUD1-201ENST00000300302 SPEM1Q8N4L4 309 aa15.17■□□□□ 0.02
HERPUD1-201ENST00000300302 C2orf73Q8N5S3 287 aaPredicted RBP15.17■□□□□ 0.02
HERPUD1-201ENST00000300302 LMNTD1Q8N9Z9 388 aa15.17■□□□□ 0.02
HERPUD1-201ENST00000300302 GLB1L3Q8NCI6 653 aaPredicted RBP15.17■□□□□ 0.02
HERPUD1-201ENST00000300302 OR13H1Q8NG92 308 aa15.17■□□□□ 0.02
HERPUD1-201ENST00000300302 SNX19Q92543 992 aa15.17■□□□□ 0.02
HERPUD1-201ENST00000300302 SPATA6Q9NWH7 488 aaPredicted RBP15.17■□□□□ 0.02
HERPUD1-201ENST00000300302 NMRK1Q9NWW6 199 aa15.17■□□□□ 0.02
HERPUD1-201ENST00000300302 GEMIN8Q9NWZ8 242 aaKnown RBP15.17■□□□□ 0.02
HERPUD1-201ENST00000300302 MUTYHQ9UIF7 546 aa15.17■□□□□ 0.02
HERPUD1-201ENST00000300302 LEF1Q9UJU2 399 aaPredicted RBP15.17■□□□□ 0.02
HERPUD1-201ENST00000300302 CROTQ9UKG9 612 aa15.17■□□□□ 0.02
HERPUD1-201ENST00000300302 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.17■□□□□ 0.02
HERPUD1-201ENST00000300302 DGKBQ9Y6T7 804 aa15.17■□□□□ 0.02
HERPUD1-201ENST00000300302 OR52A4PA6NMU1 304 aa15.16■□□□□ 0.02
HERPUD1-201ENST00000300302 C9JVG2 144 aa15.16■□□□□ 0.02
HERPUD1-201ENST00000300302 ANKRD28O15084 1053 aa15.16■□□□□ 0.02
HERPUD1-201ENST00000300302 ENTPD5O75356 428 aa15.16■□□□□ 0.02
HERPUD1-201ENST00000300302 PDE5AO76074 875 aa15.16■□□□□ 0.02
HERPUD1-201ENST00000300302 TNFP01375 233 aa15.16■□□□□ 0.02
HERPUD1-201ENST00000300302 NDUFS1P28331 727 aa15.16■□□□□ 0.02
HERPUD1-201ENST00000300302 PHEXP78562 749 aa15.16■□□□□ 0.02
HERPUD1-201ENST00000300302 USP39Q53GS9 565 aaKnown RBP15.16■□□□□ 0.02
HERPUD1-201ENST00000300302 HID1Q8IV36 788 aa15.16■□□□□ 0.02
HERPUD1-201ENST00000300302 LAS2Q8IYD9 372 aa15.16■□□□□ 0.02
HERPUD1-201ENST00000300302 KRT78Q8N1N4 520 aa15.16■□□□□ 0.02
HERPUD1-201ENST00000300302 WDR60Q8WVS4 1066 aa15.16■□□□□ 0.02
HERPUD1-201ENST00000300302 RLN3Q8WXF3 142 aa15.16■□□□□ 0.02
HERPUD1-201ENST00000300302 STMN2Q93045 179 aa15.16■□□□□ 0.02
HERPUD1-201ENST00000300302 HOPXQ9BPY8 73 aaPredicted RBP15.16■□□□□ 0.02
HERPUD1-201ENST00000300302 DPY30Q9C005 99 aa15.16■□□□□ 0.02
HERPUD1-201ENST00000300302 CHRDQ9H2X0 955 aa15.16■□□□□ 0.02
HERPUD1-201ENST00000300302 SPAG4Q9NPE6 437 aa15.16■□□□□ 0.02
HERPUD1-201ENST00000300302 CD320Q9NPF0 282 aa15.16■□□□□ 0.02
HERPUD1-201ENST00000300302 SLC52A3Q9NQ40 469 aa15.16■□□□□ 0.02
HERPUD1-201ENST00000300302 TBC1D29Q9UFV1 150 aa15.16■□□□□ 0.02
HERPUD1-201ENST00000300302 TAC3Q9UHF0 121 aa15.16■□□□□ 0.02
HERPUD1-201ENST00000300302 PCOLCE2Q9UKZ9 415 aa15.16■□□□□ 0.02
HERPUD1-201ENST00000300302 SH2B3Q9UQQ2 575 aa15.16■□□□□ 0.02
HERPUD1-201ENST00000300302 PCDHGA7Q9Y5G6 932 aa15.16■□□□□ 0.02
HERPUD1-201ENST00000300302 PIPSLA2A3N6 862 aa15.16■□□□□ 0.02
HERPUD1-201ENST00000300302 EEDO75530 441 aaKnown RBP15.16■□□□□ 0.02
HERPUD1-201ENST00000300302 BCKDHAP12694 445 aa15.16■□□□□ 0.02
HERPUD1-201ENST00000300302 CDH1P12830 882 aa15.16■□□□□ 0.02
HERPUD1-201ENST00000300302 AMD1P17707 334 aa15.16■□□□□ 0.02
HERPUD1-201ENST00000300302 CXCR2P25025 360 aa15.16■□□□□ 0.02
HERPUD1-201ENST00000300302 ACTR1BP42025 376 aa15.16■□□□□ 0.02
HERPUD1-201ENST00000300302 ZFP36L2P47974 494 aaKnown RBP15.16■□□□□ 0.02
HERPUD1-201ENST00000300302 ACTR3P61158 418 aa15.16■□□□□ 0.02
HERPUD1-201ENST00000300302 ACTR1AP61163 376 aa15.16■□□□□ 0.02
HERPUD1-201ENST00000300302 ILF3Q12906 894 aaKnown RBP eCLIP15.16■□□□□ 0.022e-6■□□□□ 9.1
HERPUD1-201ENST00000300302 PTGR1Q14914 329 aa15.16■□□□□ 0.02
HERPUD1-201ENST00000300302 PRMT9Q6P2P2 845 aa15.16■□□□□ 0.02
HERPUD1-201ENST00000300302 RIPOR1Q6ZS17 1223 aa15.16■□□□□ 0.02
HERPUD1-201ENST00000300302 RETREG3Q86VR2 466 aa15.16■□□□□ 0.02
HERPUD1-201ENST00000300302 HPS6Q86YV9 775 aa15.16■□□□□ 0.02
HERPUD1-201ENST00000300302 CAMKK1Q8N5S9 505 aa15.16■□□□□ 0.02
HERPUD1-201ENST00000300302 PJA1Q8NG27 643 aa15.16■□□□□ 0.02
HERPUD1-201ENST00000300302 OR2L8Q8NGY9 312 aa15.16■□□□□ 0.02
HERPUD1-201ENST00000300302 HUS1BQ8NHY5 278 aa15.16■□□□□ 0.02
HERPUD1-201ENST00000300302 CLDN23Q96B33 292 aa15.16■□□□□ 0.02
HERPUD1-201ENST00000300302 ACAT2Q9BWD1 397 aa15.16■□□□□ 0.02
HERPUD1-201ENST00000300302 TMEM168Q9H0V1 697 aa15.16■□□□□ 0.02
HERPUD1-201ENST00000300302 PCED1AQ9H1Q7 454 aa15.16■□□□□ 0.02
HERPUD1-201ENST00000300302 ACTL8Q9H568 366 aa15.16■□□□□ 0.02
HERPUD1-201ENST00000300302 PELI2Q9HAT8 420 aa15.16■□□□□ 0.02
HERPUD1-201ENST00000300302 ADA2Q9NZK5 511 aa15.16■□□□□ 0.02
HERPUD1-201ENST00000300302 MAGEB17A8MXT2 336 aa15.15■□□□□ 0.02
HERPUD1-201ENST00000300302 FOXE1O00358 373 aaPredicted RBP15.15■□□□□ 0.02
HERPUD1-201ENST00000300302 MYO1DO94832 1006 aa15.15■□□□□ 0.02
HERPUD1-201ENST00000300302 THEGLP0DJG4 465 aa15.15■□□□□ 0.02
HERPUD1-201ENST00000300302 AK4P27144 223 aaPredicted RBP15.15■□□□□ 0.02
HERPUD1-201ENST00000300302 IL12AP29459 219 aa15.15■□□□□ 0.02
HERPUD1-201ENST00000300302 PKLRP30613 574 aa15.15■□□□□ 0.02
HERPUD1-201ENST00000300302 RPS9P46781 194 aaKnown RBP15.15■□□□□ 0.02
HERPUD1-201ENST00000300302 TIGD2Q4W5G0 525 aa15.15■□□□□ 0.02
HERPUD1-201ENST00000300302 PIGGQ5H8A4 983 aa15.15■□□□□ 0.02
HERPUD1-201ENST00000300302 SLC30A9Q6PML9 568 aa15.15■□□□□ 0.02
HERPUD1-201ENST00000300302 LAYNQ6UX15 382 aa15.15■□□□□ 0.02
HERPUD1-201ENST00000300302 PHACTR4Q8IZ21 702 aa15.15■□□□□ 0.02
HERPUD1-201ENST00000300302 FAM160A2Q8N612 972 aaPredicted RBP15.15■□□□□ 0.02
HERPUD1-201ENST00000300302 FRMD1Q8N878 549 aa15.15■□□□□ 0.02
HERPUD1-201ENST00000300302 OR52E1Q8NGJ3 308 aa15.15■□□□□ 0.02
HERPUD1-201ENST00000300302 VPS33AQ96AX1 596 aa15.15■□□□□ 0.02
HERPUD1-201ENST00000300302 CCDC124Q96CT7 223 aaKnown RBP15.15■□□□□ 0.02
HERPUD1-201ENST00000300302 APIPQ96GX9 242 aa15.15■□□□□ 0.02
HERPUD1-201ENST00000300302 APOLD1Q96LR9 279 aa15.15■□□□□ 0.02
HERPUD1-201ENST00000300302 KIR3DX1Q9H7L2 352 aa15.15■□□□□ 0.02
HERPUD1-201ENST00000300302 MAP10Q9P2G4 905 aa15.15■□□□□ 0.02
HERPUD1-201ENST00000300302 RUVBL1Q9Y265 456 aaKnown RBP15.15■□□□□ 0.02
HERPUD1-201ENST00000300302 TSC22D4Q9Y3Q8 395 aa15.15■□□□□ 0.02
HERPUD1-201ENST00000300302 NPPAP01160 153 aa15.14■□□□□ 0.01
HERPUD1-201ENST00000300302 CLNS1AP54105 237 aaKnown RBP15.14■□□□□ 0.01
HERPUD1-201ENST00000300302 FOXM1Q08050 763 aa15.14■□□□□ 0.01
HERPUD1-201ENST00000300302 ACSM2AQ08AH3 577 aa15.14■□□□□ 0.01
HERPUD1-201ENST00000300302 ACSM2BQ68CK6 577 aa15.14■□□□□ 0.01
HERPUD1-201ENST00000300302 NOXRED1Q6NXP6 359 aa15.14■□□□□ 0.01
HERPUD1-201ENST00000300302 TMIGD1Q6UXZ0 262 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms