RNA–Protein interactions for RNA: ENST00000298746.4

TRUB1-201, Transcript of TruB pseudouridine synthase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRUB1, Length 3,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-201ENST00000298746 NFKBIEO00221 500 aa11.09□□□□□ -0.63
TRUB1-201ENST00000298746 OR7A17O14581 309 aa11.09□□□□□ -0.63
TRUB1-201ENST00000298746 SLC25A14O95258 325 aaPredicted RBP11.09□□□□□ -0.63
TRUB1-201ENST00000298746 CRYZL1O95825 349 aa11.09□□□□□ -0.63
TRUB1-201ENST00000298746 PTHP01270 115 aa11.09□□□□□ -0.63
TRUB1-201ENST00000298746 PRKCAP17252 672 aa11.09□□□□□ -0.63
TRUB1-201ENST00000298746 KDELR2P33947 212 aa11.09□□□□□ -0.63
TRUB1-201ENST00000298746 OR1E2P47887 323 aa11.09□□□□□ -0.63
TRUB1-201ENST00000298746 CDK10Q15131 360 aa11.09□□□□□ -0.63
TRUB1-201ENST00000298746 DUSP28Q4G0W2 176 aa11.09□□□□□ -0.63
TRUB1-201ENST00000298746 PYDC2Q56P42 97 aa11.09□□□□□ -0.63
TRUB1-201ENST00000298746 GNASQ5JWF2 1037 aa11.09□□□□□ -0.63
TRUB1-201ENST00000298746 C10orf62Q5T681 223 aaPredicted RBP11.09□□□□□ -0.63
TRUB1-201ENST00000298746 CAPN13Q6MZZ7 669 aaPredicted RBP11.09□□□□□ -0.63
TRUB1-201ENST00000298746 MSRB3Q8IXL7 192 aa11.09□□□□□ -0.63
TRUB1-201ENST00000298746 SLC34A3Q8N130 599 aa11.09□□□□□ -0.63
TRUB1-201ENST00000298746 GPR150Q8NGU9 434 aa11.09□□□□□ -0.63
TRUB1-201ENST00000298746 OR6F1Q8NGZ6 308 aa11.09□□□□□ -0.63
TRUB1-201ENST00000298746 ATP13A1Q9HD20 1204 aa11.09□□□□□ -0.63
TRUB1-201ENST00000298746 NLE1Q9NVX2 485 aaPredicted RBP11.09□□□□□ -0.63
TRUB1-201ENST00000298746 SH3BP4Q9P0V3 963 aa11.09□□□□□ -0.63
TRUB1-201ENST00000298746 DLGAP4Q9Y2H0 992 aa11.09□□□□□ -0.63
TRUB1-201ENST00000298746 PCDHB9Q9Y5E1 797 aa11.09□□□□□ -0.63
TRUB1-201ENST00000298746 HSPE1-MOB4S4R3N1 261 aa11.09□□□□□ -0.63
TRUB1-201ENST00000298746 MEIOCA2RUB1 952 aa11.09□□□□□ -0.63
TRUB1-201ENST00000298746 GRXCR2A6NFK2 248 aa11.09□□□□□ -0.63
TRUB1-201ENST00000298746 FAM220BPB1ANY3 271 aa11.09□□□□□ -0.63
TRUB1-201ENST00000298746 WISP3O95389 354 aaPredicted RBP11.09□□□□□ -0.63
TRUB1-201ENST00000298746 FHP07954 510 aa11.09□□□□□ -0.63
TRUB1-201ENST00000298746 TSPAN19P0C672 248 aa11.09□□□□□ -0.63
TRUB1-201ENST00000298746 TNFSF8P32971 234 aa11.09□□□□□ -0.63
TRUB1-201ENST00000298746 TGFBR2P37173 567 aa11.09□□□□□ -0.63
TRUB1-201ENST00000298746 SUOXP51687 545 aa11.09□□□□□ -0.63
TRUB1-201ENST00000298746 ZXDBP98169 803 aa11.09□□□□□ -0.63
TRUB1-201ENST00000298746 FADDQ13158 208 aa11.09□□□□□ -0.63
TRUB1-201ENST00000298746 CEP78Q5JTW2 689 aa11.09□□□□□ -0.63
TRUB1-201ENST00000298746 FAM171A1Q5VUB5 890 aa11.09□□□□□ -0.63
TRUB1-201ENST00000298746 KDM4DQ6B0I6 523 aa11.09□□□□□ -0.63
TRUB1-201ENST00000298746 RGMBQ6NW40 437 aa11.09□□□□□ -0.63
TRUB1-201ENST00000298746 LINGO4Q6UY18 593 aa11.09□□□□□ -0.63
TRUB1-201ENST00000298746 MON1AQ86VX9 555 aa11.09□□□□□ -0.63
TRUB1-201ENST00000298746 KRT73Q86Y46 540 aa11.09□□□□□ -0.63
TRUB1-201ENST00000298746 JPH3Q8WXH2 748 aaPredicted RBP11.09□□□□□ -0.63
TRUB1-201ENST00000298746 NELL1Q92832 810 aa11.09□□□□□ -0.63
TRUB1-201ENST00000298746 DIRAS2Q96HU8 199 aa11.09□□□□□ -0.63
TRUB1-201ENST00000298746 COL21A1Q96P44 957 aa11.09□□□□□ -0.63
TRUB1-201ENST00000298746 SNX18Q96RF0 628 aa11.09□□□□□ -0.63
TRUB1-201ENST00000298746 GFM1Q96RP9 751 aaKnown RBP11.09□□□□□ -0.63
TRUB1-201ENST00000298746 IL4I1Q96RQ9 567 aa11.09□□□□□ -0.63
TRUB1-201ENST00000298746 MGLLQ99685 303 aa11.09□□□□□ -0.63
TRUB1-201ENST00000298746 SEPT5Q99719 369 aaPredicted RBP11.09□□□□□ -0.63
TRUB1-201ENST00000298746 MS4A12Q9NXJ0 267 aa11.09□□□□□ -0.63
TRUB1-201ENST00000298746 CRLS1Q9UJA2 301 aa11.09□□□□□ -0.63
TRUB1-201ENST00000298746 C9P02748 559 aa11.09□□□□□ -0.63
TRUB1-201ENST00000298746 ZNF7P17097 686 aaPredicted RBP11.09□□□□□ -0.63
TRUB1-201ENST00000298746 GRK5P34947 590 aa11.09□□□□□ -0.63
TRUB1-201ENST00000298746 RGS6P49758 472 aa11.09□□□□□ -0.63
TRUB1-201ENST00000298746 PRKCDQ05655 676 aa11.09□□□□□ -0.63
TRUB1-201ENST00000298746 SCN1BQ07699 218 aa11.09□□□□□ -0.63
TRUB1-201ENST00000298746 SLAMF1Q13291 335 aa11.09□□□□□ -0.63
TRUB1-201ENST00000298746 SERINC3Q13530 473 aa11.09□□□□□ -0.63
TRUB1-201ENST00000298746 FAM209AQ5JX71 171 aa11.09□□□□□ -0.63
TRUB1-201ENST00000298746 WDR45BQ5MNZ6 344 aa11.09□□□□□ -0.63
TRUB1-201ENST00000298746 PTCHD4Q6ZW05 846 aa11.09□□□□□ -0.63
TRUB1-201ENST00000298746 SLC44A2Q8IWA5 706 aaPredicted RBP11.09□□□□□ -0.63
TRUB1-201ENST00000298746 ZZZ3Q8IYH5 903 aa11.09□□□□□ -0.63
TRUB1-201ENST00000298746 GGHQ92820 318 aa11.09□□□□□ -0.63
TRUB1-201ENST00000298746 VPS35Q96QK1 796 aa11.09□□□□□ -0.63
TRUB1-201ENST00000298746 ASPNQ9BXN1 380 aa11.09□□□□□ -0.63
TRUB1-201ENST00000298746 ADGRE3Q9BY15 652 aa11.09□□□□□ -0.63
TRUB1-201ENST00000298746 ASB8Q9H765 288 aa11.09□□□□□ -0.63
TRUB1-201ENST00000298746 NMRK2Q9NPI5 230 aa11.09□□□□□ -0.63
TRUB1-201ENST00000298746 MALT1Q9UDY8 824 aa11.09□□□□□ -0.63
TRUB1-201ENST00000298746 SPEF1Q9Y4P9 236 aa11.09□□□□□ -0.63
TRUB1-201ENST00000298746 RAI2Q9Y5P3 530 aa11.09□□□□□ -0.63
TRUB1-201ENST00000298746 CLCA1A8K7I4 914 aa11.08□□□□□ -0.64
TRUB1-201ENST00000298746 M0R082 166 aa11.08□□□□□ -0.64
TRUB1-201ENST00000298746 DSCR3O14972 297 aa11.08□□□□□ -0.64
TRUB1-201ENST00000298746 PEX11BO96011 259 aa11.08□□□□□ -0.64
TRUB1-201ENST00000298746 CCNYL3P0C7X3 344 aa11.08□□□□□ -0.64
TRUB1-201ENST00000298746 CKMT1AP12532 417 aa11.08□□□□□ -0.64
TRUB1-201ENST00000298746 TACR1P25103 407 aa11.08□□□□□ -0.64
TRUB1-201ENST00000298746 CRATP43155 626 aa11.08□□□□□ -0.64
TRUB1-201ENST00000298746 CRYBB1P53674 252 aaPredicted RBP11.08□□□□□ -0.64
TRUB1-201ENST00000298746 MRPL28Q13084 256 aaKnown RBP11.08□□□□□ -0.64
TRUB1-201ENST00000298746 QPRTQ15274 297 aa11.08□□□□□ -0.64
TRUB1-201ENST00000298746 TAF1AQ15573 450 aaPredicted RBP11.08□□□□□ -0.64
TRUB1-201ENST00000298746 SDE2Q6IQ49 451 aa11.08□□□□□ -0.64
TRUB1-201ENST00000298746 MDGA1Q8NFP4 955 aa11.08□□□□□ -0.64
TRUB1-201ENST00000298746 OR10G2Q8NGC3 310 aa11.08□□□□□ -0.64
TRUB1-201ENST00000298746 OR6K2Q8NGY2 324 aa11.08□□□□□ -0.64
TRUB1-201ENST00000298746 MAL2Q969L2 176 aa11.08□□□□□ -0.64
TRUB1-201ENST00000298746 TMEM203Q969S6 136 aa11.08□□□□□ -0.64
TRUB1-201ENST00000298746 AP5M1Q9H0R1 490 aa11.08□□□□□ -0.64
TRUB1-201ENST00000298746 KCNH6Q9H252 994 aa11.08□□□□□ -0.64
TRUB1-201ENST00000298746 NDRG4Q9ULP0 352 aaKnown RBP11.08□□□□□ -0.64
TRUB1-201ENST00000298746 C17orf102A2RUQ5 167 aa11.08□□□□□ -0.64
TRUB1-201ENST00000298746 C12orf71A8MTZ7 269 aa11.08□□□□□ -0.64
TRUB1-201ENST00000298746 PLK4O00444 970 aa11.08□□□□□ -0.64
TRUB1-201ENST00000298746 MANBAO00462 879 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms