RNA–Protein interactions for RNA: ENST00000296503.9

HMGB2-201, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-201ENST00000296503 CEP128Q6ZU80 1094 aa11.63□□□□□ -0.55
HMGB2-201ENST00000296503 TBC1D1Q86TI0 1168 aaPredicted RBP11.63□□□□□ -0.55
HMGB2-201ENST00000296503 SYTL1Q8IYJ3 562 aa11.63□□□□□ -0.55
HMGB2-201ENST00000296503 ZSCAN1Q8NBB4 408 aa11.63□□□□□ -0.55
HMGB2-201ENST00000296503 HMGCLL1Q8TB92 370 aa11.63□□□□□ -0.55
HMGB2-201ENST00000296503 FBF1Q8TES7 1133 aa11.63□□□□□ -0.55
HMGB2-201ENST00000296503 VPS39Q96JC1 886 aa11.63□□□□□ -0.55
HMGB2-201ENST00000296503 TMEM237Q96Q45 408 aa11.63□□□□□ -0.55
HMGB2-201ENST00000296503 ACAT2Q9BWD1 397 aa11.63□□□□□ -0.55
HMGB2-201ENST00000296503 SLC7A5P2Q9GIP4 190 aa11.63□□□□□ -0.55
HMGB2-201ENST00000296503 RHOJQ9H4E5 214 aa11.63□□□□□ -0.55
HMGB2-201ENST00000296503 SLC24A3Q9HC58 644 aa11.63□□□□□ -0.55
HMGB2-201ENST00000296503 FAM60AQ9NP50 221 aa11.63□□□□□ -0.55
HMGB2-201ENST00000296503 ABCF3Q9NUQ8 709 aa11.63□□□□□ -0.55
HMGB2-201ENST00000296503 SSUH2Q9Y2M2 353 aa11.63□□□□□ -0.55
HMGB2-201ENST00000296503 MTO1Q9Y2Z2 717 aaKnown RBP11.63□□□□□ -0.55
HMGB2-201ENST00000296503 PABPN1LA6NDY0 278 aaKnown RBP11.63□□□□□ -0.55
HMGB2-201ENST00000296503 FAM159BA6NKW6 160 aa11.63□□□□□ -0.55
HMGB2-201ENST00000296503 EFSO43281 561 aa11.63□□□□□ -0.55
HMGB2-201ENST00000296503 PRICKLE3O43900 615 aaPredicted RBP11.63□□□□□ -0.55
HMGB2-201ENST00000296503 DLGAP3O95886 979 aa11.63□□□□□ -0.55
HMGB2-201ENST00000296503 MT-ND3P03897 115 aa11.63□□□□□ -0.55
HMGB2-201ENST00000296503 C8GP07360 202 aa11.63□□□□□ -0.55
HMGB2-201ENST00000296503 HIST1H2AGP0C0S8 130 aaPredicted RBP11.63□□□□□ -0.55
HMGB2-201ENST00000296503 NEFHP12036 1026 aa11.63□□□□□ -0.55
HMGB2-201ENST00000296503 HIST1H2ADP20671 130 aa11.63□□□□□ -0.55
HMGB2-201ENST00000296503 RPA3P35244 121 aaPredicted RBP11.63□□□□□ -0.55
HMGB2-201ENST00000296503 MSH2P43246 934 aa11.63□□□□□ -0.55
HMGB2-201ENST00000296503 PNLIPRP1P54315 467 aa11.63□□□□□ -0.55
HMGB2-201ENST00000296503 ILF2Q12905 390 aaKnown RBP11.63□□□□□ -0.55
HMGB2-201ENST00000296503 ARHGAP19Q14CB8 494 aa11.63□□□□□ -0.55
HMGB2-201ENST00000296503 ZIC1Q15915 447 aa11.63□□□□□ -0.55
HMGB2-201ENST00000296503 FIGLAQ6QHK4 219 aa11.63□□□□□ -0.55
HMGB2-201ENST00000296503 GPR155Q7Z3F1 870 aa11.63□□□□□ -0.55
HMGB2-201ENST00000296503 GPR135Q8IZ08 494 aa11.63□□□□□ -0.55
HMGB2-201ENST00000296503 PPM1NQ8N819 430 aa11.63□□□□□ -0.55
HMGB2-201ENST00000296503 FBXO15Q8NCQ5 510 aaPredicted RBP11.63□□□□□ -0.55
HMGB2-201ENST00000296503 OR1L3Q8NH93 324 aa11.63□□□□□ -0.55
HMGB2-201ENST00000296503 SMPDL3AQ92484 453 aa11.63□□□□□ -0.55
HMGB2-201ENST00000296503 KIAA1143Q96AT1 154 aaPredicted RBP11.63□□□□□ -0.55
HMGB2-201ENST00000296503 HIST1H2AHQ96KK5 128 aa11.63□□□□□ -0.55
HMGB2-201ENST00000296503 FAM210AQ96ND0 272 aa11.63□□□□□ -0.55
HMGB2-201ENST00000296503 MIPEPQ99797 713 aa11.63□□□□□ -0.55
HMGB2-201ENST00000296503 CPNE1Q99829 537 aa11.63□□□□□ -0.55
HMGB2-201ENST00000296503 HIST1H2AJQ99878 128 aa11.63□□□□□ -0.55
HMGB2-201ENST00000296503 ELAC2Q9BQ52 826 aaKnown RBP11.63□□□□□ -0.55
HMGB2-201ENST00000296503 H2AFJQ9BTM1 129 aa11.63□□□□□ -0.55
HMGB2-201ENST00000296503 TWSG1Q9GZX9 223 aa11.63□□□□□ -0.55
HMGB2-201ENST00000296503 PRORYQ9H606 182 aa11.63□□□□□ -0.55
HMGB2-201ENST00000296503 PARVBQ9HBI1 364 aa11.63□□□□□ -0.55
HMGB2-201ENST00000296503 IRAK4Q9NWZ3 460 aa11.63□□□□□ -0.55
HMGB2-201ENST00000296503 ADAMTS6Q9UKP5 1117 aa11.63□□□□□ -0.55
HMGB2-201ENST00000296503 PADI1Q9ULC6 663 aa11.63□□□□□ -0.55
HMGB2-201ENST00000296503 LOC101059948A0A1B0GTJ6 334 aa11.62□□□□□ -0.55
HMGB2-201ENST00000296503 DIAPH2O60879 1101 aa11.62□□□□□ -0.55
HMGB2-201ENST00000296503 UBOX5O94941 541 aa11.62□□□□□ -0.55
HMGB2-201ENST00000296503 SLC16A8O95907 504 aa11.62□□□□□ -0.55
HMGB2-201ENST00000296503 PSMB5P28074 263 aa11.62□□□□□ -0.55
HMGB2-201ENST00000296503 CMPK1P30085 196 aa11.62□□□□□ -0.55
HMGB2-201ENST00000296503 STX2P32856 288 aa11.62□□□□□ -0.55
HMGB2-201ENST00000296503 GRIA3P42263 894 aa11.62□□□□□ -0.55
HMGB2-201ENST00000296503 ITGA1P56199 1179 aa11.62□□□□□ -0.55
HMGB2-201ENST00000296503 TAS2R39P59534 338 aa11.62□□□□□ -0.55
HMGB2-201ENST00000296503 ROR2Q01974 943 aaKnown RBP11.62□□□□□ -0.55
HMGB2-201ENST00000296503 ABHD18Q0P651 414 aa11.62□□□□□ -0.55
HMGB2-201ENST00000296503 DEFB110Q30KQ9 67 aa11.62□□□□□ -0.55
HMGB2-201ENST00000296503 KBTBD12Q3ZCT8 623 aa11.62□□□□□ -0.55
HMGB2-201ENST00000296503 THEMIS2Q5TEJ8 643 aa11.62□□□□□ -0.55
HMGB2-201ENST00000296503 PRAMEF17Q5VTA0 474 aa11.62□□□□□ -0.55
HMGB2-201ENST00000296503 KIAA1614Q5VZ46 1190 aa11.62□□□□□ -0.55
HMGB2-201ENST00000296503 PPFIBP2Q8ND30 876 aa11.62□□□□□ -0.55
HMGB2-201ENST00000296503 OR2A1Q8NGT9 310 aa11.62□□□□□ -0.55
HMGB2-201ENST00000296503 RNF217Q8TC41 542 aa11.62□□□□□ -0.55
HMGB2-201ENST00000296503 ZNF480Q8WV37 535 aa11.62□□□□□ -0.55
HMGB2-201ENST00000296503 ZUFSPQ96AP4 578 aa11.62□□□□□ -0.55
HMGB2-201ENST00000296503 KLHL29Q96CT2 875 aa11.62□□□□□ -0.55
HMGB2-201ENST00000296503 CLIP3Q96DZ5 547 aa11.62□□□□□ -0.55
HMGB2-201ENST00000296503 CCDC138Q96M89 665 aa11.62□□□□□ -0.55
HMGB2-201ENST00000296503 SLC12A9Q9BXP2 914 aa11.62□□□□□ -0.55
HMGB2-201ENST00000296503 TRIM54Q9BYV2 358 aa11.62□□□□□ -0.55
HMGB2-201ENST00000296503 GPN2Q9H9Y4 310 aaPredicted RBP11.62□□□□□ -0.55
HMGB2-201ENST00000296503 PDE10AQ9Y233 779 aa11.62□□□□□ -0.55
HMGB2-201ENST00000296503 PCM1Q15154 2024 aa11.62□□□□□ -0.55
HMGB2-201ENST00000296503 SPTBP11277 2137 aa11.62□□□□□ -0.55
HMGB2-201ENST00000296503 A0A1W2PPV9 198 aa11.61□□□□□ -0.55
HMGB2-201ENST00000296503 E7EQ34 232 aa11.61□□□□□ -0.55
HMGB2-201ENST00000296503 K7ENP7 123 aa11.61□□□□□ -0.55
HMGB2-201ENST00000296503 SLC16A5O15375 505 aa11.61□□□□□ -0.55
HMGB2-201ENST00000296503 FKBP9O95302 570 aa11.61□□□□□ -0.55
HMGB2-201ENST00000296503 MSL3P1P0C860 447 aa11.61□□□□□ -0.55
HMGB2-201ENST00000296503 LIFP15018 202 aa11.61□□□□□ -0.55
HMGB2-201ENST00000296503 GNAZP19086 355 aa11.61□□□□□ -0.55
HMGB2-201ENST00000296503 PHBP35232 272 aa11.61□□□□□ -0.55
HMGB2-201ENST00000296503 SPRP35270 261 aaPredicted RBP11.61□□□□□ -0.55
HMGB2-201ENST00000296503 GP5P40197 560 aa11.61□□□□□ -0.55
HMGB2-201ENST00000296503 MAP7Q14244 749 aa11.61□□□□□ -0.55
HMGB2-201ENST00000296503 USP10Q14694 798 aaKnown RBP11.61□□□□□ -0.55
HMGB2-201ENST00000296503 GRTP1Q5TC63 336 aa11.61□□□□□ -0.55
HMGB2-201ENST00000296503 INO80CQ6PI98 192 aaPredicted RBP11.61□□□□□ -0.55
HMGB2-201ENST00000296503 TRMT10CQ7L0Y3 403 aaKnown RBP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms