RNA–Protein interactions for RNA: ENST00000295701.9

CNOT9-202, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 1 (best) BASIC

Gene CNOT9, Length 1,126 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-202ENST00000295701 ZNF285Q96NJ3 590 aa8.86□□□□□ -0.99
CNOT9-202ENST00000295701 PPP1R2P1Q96PQ5 205 aa8.86□□□□□ -0.99
CNOT9-202ENST00000295701 TAAR6Q96RI8 345 aa8.86□□□□□ -0.99
CNOT9-202ENST00000295701 SLX1AQ9BQ83 275 aa8.86□□□□□ -0.99
CNOT9-202ENST00000295701 SELENOSQ9BQE4 189 aa8.86□□□□□ -0.99
CNOT9-202ENST00000295701 CRB3Q9BUF7 120 aa8.86□□□□□ -0.99
CNOT9-202ENST00000295701 SLC26A1Q9H2B4 701 aa8.86□□□□□ -0.99
CNOT9-202ENST00000295701 TSPY26PQ9H489 355 aa8.86□□□□□ -0.99
CNOT9-202ENST00000295701 WDR54Q9H977 334 aa8.86□□□□□ -0.99
CNOT9-202ENST00000295701 SYNPO2LQ9H987 977 aa8.86□□□□□ -0.99
CNOT9-202ENST00000295701 ZNF160Q9HCG1 818 aa8.86□□□□□ -0.99
CNOT9-202ENST00000295701 LUC7LQ9NQ29 371 aaKnown RBP8.86□□□□□ -0.99
CNOT9-202ENST00000295701 PTGFRNQ9P2B2 879 aa8.86□□□□□ -0.99
CNOT9-202ENST00000295701 MARCH4Q9P2E8 410 aaPredicted RBP8.86□□□□□ -0.99
CNOT9-202ENST00000295701 ZC3H7BQ9UGR2 993 aaKnown RBP8.86□□□□□ -0.99
CNOT9-202ENST00000295701 SLC39A10Q9ULF5 831 aa8.86□□□□□ -0.99
CNOT9-202ENST00000295701 EPN1Q9Y6I3 576 aaPredicted RBP8.86□□□□□ -0.99
CNOT9-202ENST00000295701 POLQO75417 2590 aa8.86□□□□□ -0.99
CNOT9-202ENST00000295701 DCHS2Q6V1P9 2916 aa8.86□□□□□ -0.99
CNOT9-202ENST00000295701 A0A0J9YVX5 310 aa8.85□□□□□ -0.99
CNOT9-202ENST00000295701 A0A1W2PPV9 198 aa8.85□□□□□ -0.99
CNOT9-202ENST00000295701 QSOX1O00391 747 aa8.85□□□□□ -0.99
CNOT9-202ENST00000295701 RASGRF2O14827 1237 aa8.85□□□□□ -0.99
CNOT9-202ENST00000295701 PSMD3O43242 534 aa8.85□□□□□ -0.99
CNOT9-202ENST00000295701 HNRNPRO43390 633 aaKnown RBP8.85□□□□□ -0.99
CNOT9-202ENST00000295701 JRKO75564 520 aa8.85□□□□□ -0.99
CNOT9-202ENST00000295701 EIF2S1P05198 315 aaKnown RBP8.85□□□□□ -0.99
CNOT9-202ENST00000295701 STSP08842 583 aa8.85□□□□□ -0.99
CNOT9-202ENST00000295701 ZGLP1P0C6A0 271 aa8.85□□□□□ -0.99
CNOT9-202ENST00000295701 CYLC1P35663 651 aaPredicted RBP8.85□□□□□ -0.99
CNOT9-202ENST00000295701 TDGF1P3P51864 188 aa8.85□□□□□ -0.99
CNOT9-202ENST00000295701 PLOD1Q02809 727 aaPredicted RBP8.85□□□□□ -0.99
CNOT9-202ENST00000295701 KLF1Q13351 362 aaPredicted RBP8.85□□□□□ -0.99
CNOT9-202ENST00000295701 MFAP5Q13361 173 aa8.85□□□□□ -0.99
CNOT9-202ENST00000295701 GRM7Q14831 915 aa8.85□□□□□ -0.99
CNOT9-202ENST00000295701 ZC3H12BQ5HYM0 836 aaKnown RBP8.85□□□□□ -0.99
CNOT9-202ENST00000295701 IRAK1BP1Q5VVH5 260 aa8.85□□□□□ -0.99
CNOT9-202ENST00000295701 ATG9BQ674R7 924 aa8.85□□□□□ -0.99
CNOT9-202ENST00000295701 B3GNTL1Q67FW5 361 aaPredicted RBP8.85□□□□□ -0.99
CNOT9-202ENST00000295701 ZNF324BQ6AW86 544 aaPredicted RBP8.85□□□□□ -0.99
CNOT9-202ENST00000295701 FAAH2Q6GMR7 532 aa8.85□□□□□ -0.99
CNOT9-202ENST00000295701 FBXO42Q6P3S6 717 aa8.85□□□□□ -0.99
CNOT9-202ENST00000295701 AFTPHQ6ULP2 937 aa8.85□□□□□ -0.99
CNOT9-202ENST00000295701 RAD9BQ6WBX8 426 aa8.85□□□□□ -0.99
CNOT9-202ENST00000295701 DCUN1D3Q8IWE4 304 aa8.85□□□□□ -0.99
CNOT9-202ENST00000295701 SLC34A3Q8N130 599 aa8.85□□□□□ -0.99
CNOT9-202ENST00000295701 SIRT6Q8N6T7 355 aa8.85□□□□□ -0.99
CNOT9-202ENST00000295701 TTC29Q8NA56 475 aaPredicted RBP8.85□□□□□ -0.99
CNOT9-202ENST00000295701 ACRBPQ8NEB7 543 aa8.85□□□□□ -0.99
CNOT9-202ENST00000295701 BRIX1Q8TDN6 353 aaKnown RBP8.85□□□□□ -0.99
CNOT9-202ENST00000295701 PSMF1Q92530 271 aa8.85□□□□□ -0.99
CNOT9-202ENST00000295701 NACC2Q96BF6 587 aa8.85□□□□□ -0.99
CNOT9-202ENST00000295701 LRRC45Q96CN5 670 aa8.85□□□□□ -0.99
CNOT9-202ENST00000295701 LMF1Q96S06 567 aa8.85□□□□□ -0.99
CNOT9-202ENST00000295701 CARD6Q9BX69 1037 aa8.85□□□□□ -0.99
CNOT9-202ENST00000295701 EPS8L2Q9H6S3 715 aa8.85□□□□□ -0.99
CNOT9-202ENST00000295701 ZNF304Q9HCX3 659 aa8.85□□□□□ -0.99
CNOT9-202ENST00000295701 SEMA3GQ9NS98 782 aa8.85□□□□□ -0.99
CNOT9-202ENST00000295701 NOP53Q9NZM5 478 aaKnown RBP8.85□□□□□ -0.99
CNOT9-202ENST00000295701 C3orf18Q9UK00 162 aa8.85□□□□□ -0.99
CNOT9-202ENST00000295701 ENTPD4Q9Y227 616 aa8.85□□□□□ -0.99
CNOT9-202ENST00000295701 OTOGQ6ZRI0 2925 aa8.84□□□□□ -0.99
CNOT9-202ENST00000295701 CACNA1CQ13936 2221 aa8.84□□□□□ -0.99
CNOT9-202ENST00000295701 HEATR9A2RTY3 570 aa8.84□□□□□ -0.99
CNOT9-202ENST00000295701 HYKKA2RU49 373 aa8.84□□□□□ -0.99
CNOT9-202ENST00000295701 SLCO2B1O94956 709 aa8.84□□□□□ -0.99
CNOT9-202ENST00000295701 C1orf105O95561 183 aa8.84□□□□□ -0.99
CNOT9-202ENST00000295701 FTCDO95954 541 aa8.84□□□□□ -0.99
CNOT9-202ENST00000295701 HPP00738 406 aa8.84□□□□□ -0.99
CNOT9-202ENST00000295701 SNRPB2P08579 225 aaKnown RBP8.84□□□□□ -0.99
CNOT9-202ENST00000295701 PRR35P0CG20 571 aa8.84□□□□□ -0.99
CNOT9-202ENST00000295701 COX6A1P12074 109 aa8.84□□□□□ -0.99
CNOT9-202ENST00000295701 MST1P26927 711 aa8.84□□□□□ -0.99
CNOT9-202ENST00000295701 CETN2P41208 172 aa8.84□□□□□ -0.99
CNOT9-202ENST00000295701 ST13P50502 369 aaKnown RBP8.84□□□□□ -0.99
CNOT9-202ENST00000295701 EFNA3P52797 238 aa8.84□□□□□ -0.99
CNOT9-202ENST00000295701 PER3P56645 1201 aa8.84□□□□□ -0.99
CNOT9-202ENST00000295701 ACVR1Q04771 509 aa8.84□□□□□ -0.99
CNOT9-202ENST00000295701 EEF1A2Q05639 463 aaKnown RBP8.84□□□□□ -0.99
CNOT9-202ENST00000295701 CDH17Q12864 832 aa8.84□□□□□ -0.99
CNOT9-202ENST00000295701 FASTKD1Q53R41 847 aaKnown RBP8.84□□□□□ -0.99
CNOT9-202ENST00000295701 TCTE1Q5JU00 501 aa8.84□□□□□ -0.99
CNOT9-202ENST00000295701 YOD1Q5VVQ6 348 aaPredicted RBP8.84□□□□□ -0.99
CNOT9-202ENST00000295701 FAM180AQ6UWF9 173 aa8.84□□□□□ -0.99
CNOT9-202ENST00000295701 UNC5DQ6UXZ4 953 aa8.84□□□□□ -0.99
CNOT9-202ENST00000295701 PPP1R21Q6ZMI0 780 aa8.84□□□□□ -0.99
CNOT9-202ENST00000295701 SYT9Q86SS6 491 aa8.84□□□□□ -0.99
CNOT9-202ENST00000295701 MCEMP1Q8IX19 187 aa8.84□□□□□ -0.99
CNOT9-202ENST00000295701 BCORP1Q8N888 145 aa8.84□□□□□ -0.99
CNOT9-202ENST00000295701 ASZ1Q8WWH4 475 aa8.84□□□□□ -0.99
CNOT9-202ENST00000295701 ZUFSPQ96AP4 578 aa8.84□□□□□ -0.99
CNOT9-202ENST00000295701 SLC22A18Q96BI1 424 aa8.84□□□□□ -0.99
CNOT9-202ENST00000295701 MIEF2Q96C03 454 aa8.84□□□□□ -0.99
CNOT9-202ENST00000295701 C10orf90Q96M02 699 aa8.84□□□□□ -0.99
CNOT9-202ENST00000295701 ACAT2Q9BWD1 397 aa8.84□□□□□ -0.99
CNOT9-202ENST00000295701 YIPF2Q9BWQ6 316 aa8.84□□□□□ -0.99
CNOT9-202ENST00000295701 TRIM5Q9C035 493 aa8.84□□□□□ -0.99
CNOT9-202ENST00000295701 MRM3Q9HC36 420 aaKnown RBP8.84□□□□□ -0.99
CNOT9-202ENST00000295701 CHRAC1Q9NRG0 131 aa8.84□□□□□ -0.99
CNOT9-202ENST00000295701 OLAHQ9NV23 265 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms