RNA–Protein interactions for RNA: ENST00000295225.9

KCNIP3-201, Transcript of potassium voltage-gated channel interacting protein 3, humanhuman

TSL 1 (best) BASIC

Gene KCNIP3, Length 2,940 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3-201ENST00000295225 ATG10Q9H0Y0 220 aa12.92□□□□□ -0.34
KCNIP3-201ENST00000295225 MIR1-1HGQ9H1L0 117 aa12.92□□□□□ -0.34
KCNIP3-201ENST00000295225 GHITMQ9H3K2 345 aa12.92□□□□□ -0.34
KCNIP3-201ENST00000295225 RIBC2Q9H4K1 309 aa12.92□□□□□ -0.34
KCNIP3-201ENST00000295225 TRNAU1APQ9NX07 287 aaKnown RBP12.92□□□□□ -0.34
KCNIP3-201ENST00000295225 DNMT3LQ9UJW3 386 aa12.92□□□□□ -0.34
KCNIP3-201ENST00000295225 SH3PXD2BA1X283 911 aa12.92□□□□□ -0.34
KCNIP3-201ENST00000295225 PIP5K1CO60331 668 aa12.92□□□□□ -0.34
KCNIP3-201ENST00000295225 PGRP06401 933 aa12.92□□□□□ -0.34
KCNIP3-201ENST00000295225 HEXBP07686 556 aa12.92□□□□□ -0.34
KCNIP3-201ENST00000295225 TMEM11P17152 192 aa12.92□□□□□ -0.34
KCNIP3-201ENST00000295225 PPM1FP49593 454 aaPredicted RBP12.92□□□□□ -0.34
KCNIP3-201ENST00000295225 TTPAP49638 278 aa12.92□□□□□ -0.34
KCNIP3-201ENST00000295225 ALDH3A2P51648 485 aa12.92□□□□□ -0.34
KCNIP3-201ENST00000295225 RAD23AP54725 363 aa12.92□□□□□ -0.34
KCNIP3-201ENST00000295225 CYP4F3Q08477 520 aa12.92□□□□□ -0.34
KCNIP3-201ENST00000295225 CXorf57Q6NSI4 855 aaKnown RBP12.92□□□□□ -0.34
KCNIP3-201ENST00000295225 Q6ZNX1 250 aa12.92□□□□□ -0.34
KCNIP3-201ENST00000295225 ZNF540Q8NDQ6 660 aa12.92□□□□□ -0.34
KCNIP3-201ENST00000295225 CMTM3Q96MX0 182 aa12.92□□□□□ -0.34
KCNIP3-201ENST00000295225 RNF186Q9NXI6 227 aa12.92□□□□□ -0.34
KCNIP3-201ENST00000295225 KPNA5O15131 536 aa12.91□□□□□ -0.34
KCNIP3-201ENST00000295225 KDELR3O43731 214 aa12.91□□□□□ -0.34
KCNIP3-201ENST00000295225 CDH1P12830 882 aa12.91□□□□□ -0.34
KCNIP3-201ENST00000295225 GGT1P19440 569 aa12.91□□□□□ -0.34
KCNIP3-201ENST00000295225 CRHBPP24387 322 aa12.91□□□□□ -0.34
KCNIP3-201ENST00000295225 HTR1EP28566 365 aa12.91□□□□□ -0.34
KCNIP3-201ENST00000295225 OPRL1P41146 370 aa12.91□□□□□ -0.34
KCNIP3-201ENST00000295225 STK19P49842 368 aaPredicted RBP12.91□□□□□ -0.34
KCNIP3-201ENST00000295225 FCGRTP55899 365 aa12.91□□□□□ -0.34
KCNIP3-201ENST00000295225 RAPSNQ13702 412 aa12.91□□□□□ -0.34
KCNIP3-201ENST00000295225 CES5AQ6NT32 575 aa12.91□□□□□ -0.34
KCNIP3-201ENST00000295225 USP51Q70EK9 711 aa12.91□□□□□ -0.34
KCNIP3-201ENST00000295225 ZSWIM9Q86XI8 627 aa12.91□□□□□ -0.34
KCNIP3-201ENST00000295225 CENPSQ8N2Z9 138 aa12.91□□□□□ -0.34
KCNIP3-201ENST00000295225 BEND7Q8N7W2 519 aaPredicted RBP12.91□□□□□ -0.34
KCNIP3-201ENST00000295225 DTX3Q8N9I9 347 aa12.91□□□□□ -0.34
KCNIP3-201ENST00000295225 ST13P5Q8NFI4 369 aaPredicted RBP12.91□□□□□ -0.34
KCNIP3-201ENST00000295225 RPL3LQ92901 407 aaKnown RBP12.91□□□□□ -0.34
KCNIP3-201ENST00000295225 ULK4Q96C45 1275 aa12.91□□□□□ -0.34
KCNIP3-201ENST00000295225 CLPBQ9H078 707 aa12.91□□□□□ -0.34
KCNIP3-201ENST00000295225 ABCG2Q9UNQ0 655 aa12.91□□□□□ -0.34
KCNIP3-201ENST00000295225 PCDHGA3Q9Y5H0 932 aa12.91□□□□□ -0.34
KCNIP3-201ENST00000295225 NINQ8N4C6 2090 aa12.91□□□□□ -0.34
KCNIP3-201ENST00000295225 CXCR6O00574 342 aa12.91□□□□□ -0.34
KCNIP3-201ENST00000295225 DEAF1O75398 565 aaPredicted RBP12.91□□□□□ -0.34
KCNIP3-201ENST00000295225 GMNNO75496 209 aa12.91□□□□□ -0.34
KCNIP3-201ENST00000295225 BCL10O95999 233 aa12.91□□□□□ -0.34
KCNIP3-201ENST00000295225 OCM2P0CE71 109 aa12.91□□□□□ -0.34
KCNIP3-201ENST00000295225 OCMP0CE72 109 aaPredicted RBP12.91□□□□□ -0.34
KCNIP3-201ENST00000295225 RAP2AP10114 183 aa12.91□□□□□ -0.34
KCNIP3-201ENST00000295225 PABPC1P11940 636 aaKnown RBP12.91□□□□□ -0.34
KCNIP3-201ENST00000295225 TNFRSF1BP20333 461 aa12.91□□□□□ -0.34
KCNIP3-201ENST00000295225 DCKP27707 260 aa12.91□□□□□ -0.34
KCNIP3-201ENST00000295225 IDUAP35475 653 aa12.91□□□□□ -0.34
KCNIP3-201ENST00000295225 CSKP41240 450 aa12.91□□□□□ -0.34
KCNIP3-201ENST00000295225 SLC11A2P49281 568 aa12.91□□□□□ -0.34
KCNIP3-201ENST00000295225 HLCSP50747 726 aa12.91□□□□□ -0.34
KCNIP3-201ENST00000295225 EEFSECP57772 596 aaKnown RBP12.91□□□□□ -0.34
KCNIP3-201ENST00000295225 DNASE1L3Q13609 305 aa12.91□□□□□ -0.34
KCNIP3-201ENST00000295225 PON2Q15165 354 aa12.91□□□□□ -0.34
KCNIP3-201ENST00000295225 CHRNA6Q15825 494 aa12.91□□□□□ -0.34
KCNIP3-201ENST00000295225 TXNDC8Q6A555 127 aa12.91□□□□□ -0.34
KCNIP3-201ENST00000295225 CHDHQ8NE62 594 aaPredicted RBP12.91□□□□□ -0.34
KCNIP3-201ENST00000295225 NDNFQ8TB73 568 aa12.91□□□□□ -0.34
KCNIP3-201ENST00000295225 FUBP3Q96I24 572 aaKnown RBP eCLIP12.91□□□□□ -0.34
KCNIP3-201ENST00000295225 VPS35Q96QK1 796 aa12.91□□□□□ -0.34
KCNIP3-201ENST00000295225 ZPBPQ9BS86 351 aa12.91□□□□□ -0.34
KCNIP3-201ENST00000295225 PLXNA4Q9HCM2 1894 aa12.91□□□□□ -0.34
KCNIP3-201ENST00000295225 M0R129 80 aa12.9□□□□□ -0.34
KCNIP3-201ENST00000295225 PRMT5O14744 637 aaPredicted RBP12.9□□□□□ -0.34
KCNIP3-201ENST00000295225 EPOP01588 193 aa12.9□□□□□ -0.34
KCNIP3-201ENST00000295225 C21orf62-AS1Q17RA5 79 aa12.9□□□□□ -0.34
KCNIP3-201ENST00000295225 AASDHQ4L235 1098 aaPredicted RBP12.9□□□□□ -0.34
KCNIP3-201ENST00000295225 OR7E24Q6IFN5 339 aa12.9□□□□□ -0.34
KCNIP3-201ENST00000295225 THAP5Q7Z6K1 395 aa12.9□□□□□ -0.34
KCNIP3-201ENST00000295225 C8orf59Q8N0T1 100 aaPredicted RBP12.9□□□□□ -0.34
KCNIP3-201ENST00000295225 PDPRQ8NCN5 879 aa12.9□□□□□ -0.34
KCNIP3-201ENST00000295225 FBXO22Q8NEZ5 403 aa12.9□□□□□ -0.34
KCNIP3-201ENST00000295225 OR13F1Q8NGS4 319 aa12.9□□□□□ -0.34
KCNIP3-201ENST00000295225 CNDP2Q96KP4 475 aaKnown RBP12.9□□□□□ -0.34
KCNIP3-201ENST00000295225 ZNF382Q96SR6 550 aa12.9□□□□□ -0.34
KCNIP3-201ENST00000295225 MNTQ99583 582 aa12.9□□□□□ -0.34
KCNIP3-201ENST00000295225 IL26Q9NPH9 171 aa12.9□□□□□ -0.34
KCNIP3-201ENST00000295225 IL17CQ9P0M4 197 aa12.9□□□□□ -0.34
KCNIP3-201ENST00000295225 ERVK-18Q9QC07 812 aa12.9□□□□□ -0.34
KCNIP3-201ENST00000295225 ZNF840PA6NDX5 716 aa12.9□□□□□ -0.34
KCNIP3-201ENST00000295225 TMEM88BA6NKF7 163 aa12.9□□□□□ -0.34
KCNIP3-201ENST00000295225 STX16O14662 325 aa12.9□□□□□ -0.34
KCNIP3-201ENST00000295225 NOL3O60936 208 aaKnown RBP12.9□□□□□ -0.34
KCNIP3-201ENST00000295225 ULK1O75385 1050 aa12.9□□□□□ -0.34
KCNIP3-201ENST00000295225 MBL2P11226 248 aaPredicted RBP12.9□□□□□ -0.34
KCNIP3-201ENST00000295225 SEC13P55735 322 aa12.9□□□□□ -0.34
KCNIP3-201ENST00000295225 PWP1Q13610 501 aa12.9□□□□□ -0.34
KCNIP3-201ENST00000295225 CARD16Q5EG05 197 aa12.9□□□□□ -0.34
KCNIP3-201ENST00000295225 OR4F3Q6IEY1 312 aa12.9□□□□□ -0.34
KCNIP3-201ENST00000295225 CRTC3Q6UUV7 619 aa12.9□□□□□ -0.34
KCNIP3-201ENST00000295225 PACRGLQ8N7B6 248 aa12.9□□□□□ -0.34
KCNIP3-201ENST00000295225 ZNF548Q8NEK5 533 aaPredicted RBP12.9□□□□□ -0.34
KCNIP3-201ENST00000295225 OR10Z1Q8NGY1 313 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms