RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 ZSWIM3Q96MP5 696 aa16.85■□□□□ 0.29
SHANK1-201ENST00000293441 ADAM7Q9H2U9 754 aa16.85■□□□□ 0.29
SHANK1-201ENST00000293441 NOX1Q9Y5S8 564 aa16.85■□□□□ 0.29
SHANK1-201ENST00000293441 ZNF20P17024 532 aa16.85■□□□□ 0.29
SHANK1-201ENST00000293441 BICRALQ6AI39 1079 aa16.85■□□□□ 0.29
SHANK1-201ENST00000293441 KIAA1161Q6NSJ0 714 aa16.85■□□□□ 0.29
SHANK1-201ENST00000293441 PROKR2Q8NFJ6 384 aa16.85■□□□□ 0.29
SHANK1-201ENST00000293441 SLC35B2Q8TB61 432 aa16.85■□□□□ 0.29
SHANK1-201ENST00000293441 DHRS1Q96LJ7 313 aa16.85■□□□□ 0.29
SHANK1-201ENST00000293441 TMEM109Q9BVC6 243 aa16.85■□□□□ 0.29
SHANK1-201ENST00000293441 METTL7AQ9H8H3 244 aa16.85■□□□□ 0.29
SHANK1-201ENST00000293441 FNIP2Q9P278 1114 aa16.85■□□□□ 0.29
SHANK1-201ENST00000293441 SERTAD3Q9UJW9 196 aa16.85■□□□□ 0.29
SHANK1-201ENST00000293441 CLIC1O00299 241 aa16.85■□□□□ 0.29
SHANK1-201ENST00000293441 HSD11B1P28845 292 aa16.85■□□□□ 0.29
SHANK1-201ENST00000293441 GALK1P51570 392 aa16.85■□□□□ 0.29
SHANK1-201ENST00000293441 RAB8AP61006 207 aa16.85■□□□□ 0.29
SHANK1-201ENST00000293441 RAB2AP61019 212 aa16.85■□□□□ 0.29
SHANK1-201ENST00000293441 CRB2Q5IJ48 1285 aa16.85■□□□□ 0.29
SHANK1-201ENST00000293441 DCAF4L2Q8NA75 395 aa16.85■□□□□ 0.29
SHANK1-201ENST00000293441 HAVCR1Q96D42 359 aa16.85■□□□□ 0.29
SHANK1-201ENST00000293441 NODALQ96S42 347 aa16.85■□□□□ 0.29
SHANK1-201ENST00000293441 MGME1Q9BQP7 344 aa16.85■□□□□ 0.29
SHANK1-201ENST00000293441 CENPMQ9NSP4 180 aa16.85■□□□□ 0.29
SHANK1-201ENST00000293441 FLRT1Q9NZU1 646 aa16.85■□□□□ 0.29
SHANK1-201ENST00000293441 GRID2O43424 1007 aa16.84■□□□□ 0.29
SHANK1-201ENST00000293441 OPN1SWP03999 348 aa16.84■□□□□ 0.29
SHANK1-201ENST00000293441 ZNF3P17036 446 aa16.84■□□□□ 0.29
SHANK1-201ENST00000293441 AP1S2P56377 157 aa16.84■□□□□ 0.29
SHANK1-201ENST00000293441 TSPAN5P62079 268 aa16.84■□□□□ 0.29
SHANK1-201ENST00000293441 TRIM74Q86UV6 250 aa16.84■□□□□ 0.29
SHANK1-201ENST00000293441 CRTAC1Q9NQ79 661 aa16.84■□□□□ 0.29
SHANK1-201ENST00000293441 GALPQ9UBC7 116 aa16.84■□□□□ 0.29
SHANK1-201ENST00000293441 E7ENX8 843 aa16.84■□□□□ 0.29
SHANK1-201ENST00000293441 SERPINA3P01011 423 aa16.84■□□□□ 0.29
SHANK1-201ENST00000293441 XKP51811 444 aa16.84■□□□□ 0.29
SHANK1-201ENST00000293441 AVL9Q8NBF6 648 aa16.84■□□□□ 0.29
SHANK1-201ENST00000293441 DNAJB8Q8NHS0 232 aa16.84■□□□□ 0.29
SHANK1-201ENST00000293441 ARHGAP9Q9BRR9 750 aa16.84■□□□□ 0.29
SHANK1-201ENST00000293441 SDHAF3Q9NRP4 125 aa16.84■□□□□ 0.29
SHANK1-201ENST00000293441 A0A0X1KG70 313 aa16.84■□□□□ 0.29
SHANK1-201ENST00000293441 JMJD7P0C870 316 aa16.84■□□□□ 0.29
SHANK1-201ENST00000293441 RPS13P62277 151 aaKnown RBP16.84■□□□□ 0.29
SHANK1-201ENST00000293441 PTPRCAPQ14761 206 aa16.84■□□□□ 0.29
SHANK1-201ENST00000293441 UPP1Q16831 310 aa16.84■□□□□ 0.29
SHANK1-201ENST00000293441 RBM20Q5T481 1227 aaKnown RBP16.84■□□□□ 0.29
SHANK1-201ENST00000293441 TMEM198Q66K66 360 aa16.84■□□□□ 0.29
SHANK1-201ENST00000293441 FRMD6Q96NE9 622 aa16.84■□□□□ 0.29
SHANK1-201ENST00000293441 KCNC2Q96PR1 638 aa16.84■□□□□ 0.29
SHANK1-201ENST00000293441 LGR4Q9BXB1 951 aa16.84■□□□□ 0.29
SHANK1-201ENST00000293441 POLR2J3Q9H1A7 115 aaKnown RBP16.84■□□□□ 0.29
SHANK1-201ENST00000293441 H0YGN5 161 aa16.84■□□□□ 0.29
SHANK1-201ENST00000293441 AHSGP02765 367 aa16.84■□□□□ 0.29
SHANK1-201ENST00000293441 PGRP06401 933 aa16.84■□□□□ 0.29
SHANK1-201ENST00000293441 PREPP48147 710 aa16.84■□□□□ 0.29
SHANK1-201ENST00000293441 ALDH3A2P51648 485 aa16.84■□□□□ 0.29
SHANK1-201ENST00000293441 PAFAH1B3Q15102 231 aaKnown RBP16.84■□□□□ 0.29
SHANK1-201ENST00000293441 CRTC2Q53ET0 693 aaPredicted RBP16.84■□□□□ 0.29
SHANK1-201ENST00000293441 C12orf76Q8N812 135 aaPredicted RBP16.84■□□□□ 0.29
SHANK1-201ENST00000293441 OR4F6Q8NGB9 312 aa16.84■□□□□ 0.29
SHANK1-201ENST00000293441 OR5K1Q8NHB7 308 aa16.84■□□□□ 0.29
SHANK1-201ENST00000293441 SEC61A2Q9H9S3 476 aa16.84■□□□□ 0.29
SHANK1-201ENST00000293441 POLR2CP19387 275 aaPredicted RBP16.84■□□□□ 0.29
SHANK1-201ENST00000293441 CD47Q08722 323 aa16.84■□□□□ 0.29
SHANK1-201ENST00000293441 SYVN1Q86TM6 617 aa16.84■□□□□ 0.29
SHANK1-201ENST00000293441 P2RY13Q9BPV8 354 aa16.84■□□□□ 0.29
SHANK1-201ENST00000293441 THUMPD1Q9NXG2 353 aaKnown RBP16.84■□□□□ 0.29
SHANK1-201ENST00000293441 SCGNO76038 276 aa16.83■□□□□ 0.29
SHANK1-201ENST00000293441 PEX2P28328 305 aa16.83■□□□□ 0.29
SHANK1-201ENST00000293441 FMO3P31513 532 aa16.83■□□□□ 0.29
SHANK1-201ENST00000293441 SEMA3AQ14563 771 aa16.83■□□□□ 0.29
SHANK1-201ENST00000293441 IDNKQ5T6J7 187 aa16.83■□□□□ 0.29
SHANK1-201ENST00000293441 GPRC6AQ5T6X5 926 aa16.83■□□□□ 0.29
SHANK1-201ENST00000293441 PCDHAC1Q9H158 963 aa16.83■□□□□ 0.29
SHANK1-201ENST00000293441 AIREO43918 545 aa16.83■□□□□ 0.29
SHANK1-201ENST00000293441 GJB5O95377 273 aa16.83■□□□□ 0.29
SHANK1-201ENST00000293441 OGDHQ02218 1023 aa16.83■□□□□ 0.29
SHANK1-201ENST00000293441 CCINQ13939 588 aa16.83■□□□□ 0.29
SHANK1-201ENST00000293441 OR10G2Q8NGC3 310 aa16.83■□□□□ 0.29
SHANK1-201ENST00000293441 SLC5A11Q8WWX8 675 aa16.83■□□□□ 0.29
SHANK1-201ENST00000293441 LRRC3Q9BY71 257 aa16.83■□□□□ 0.29
SHANK1-201ENST00000293441 SIGLEC1Q9BZZ2 1709 aa16.83■□□□□ 0.28
SHANK1-201ENST00000293441 AGR2O95994 175 aa16.83■□□□□ 0.28
SHANK1-201ENST00000293441 CD2P06729 351 aa16.83■□□□□ 0.28
SHANK1-201ENST00000293441 FUT4P22083 530 aa16.83■□□□□ 0.28
SHANK1-201ENST00000293441 HSF2Q03933 536 aa16.83■□□□□ 0.28
SHANK1-201ENST00000293441 KCNJ11Q14654 390 aa16.83■□□□□ 0.28
SHANK1-201ENST00000293441 PDE10AQ9Y233 779 aa16.83■□□□□ 0.28
SHANK1-201ENST00000293441 XRN1Q8IZH2 1706 aaKnown RBP16.83■□□□□ 0.28
SHANK1-201ENST00000293441 TMEM233B4DJY2 109 aa16.83■□□□□ 0.28
SHANK1-201ENST00000293441 GATBO75879 557 aaKnown RBP16.83■□□□□ 0.28
SHANK1-201ENST00000293441 ZNF432O94892 652 aa16.83■□□□□ 0.28
SHANK1-201ENST00000293441 KLHL22Q53GT1 634 aa16.83■□□□□ 0.28
SHANK1-201ENST00000293441 NFKBIDQ8NI38 313 aa16.83■□□□□ 0.28
SHANK1-201ENST00000293441 TLCD1Q96CP7 247 aa16.83■□□□□ 0.28
SHANK1-201ENST00000293441 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.83■□□□□ 0.28
SHANK1-201ENST00000293441 CST11Q9H112 138 aa16.83■□□□□ 0.28
SHANK1-201ENST00000293441 COQ10BQ9H8M1 238 aa16.83■□□□□ 0.28
SHANK1-201ENST00000293441 SMURF2Q9HAU4 748 aa16.83■□□□□ 0.28
SHANK1-201ENST00000293441 DZANK1Q9NVP4 752 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms