RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 KEAP1Q14145 624 aa12.54□□□□□ -0.4
COL8A1-202ENST00000273342 ZFP69Q49AA0 526 aa12.54□□□□□ -0.4
COL8A1-202ENST00000273342 ZC3H12BQ5HYM0 836 aaKnown RBP12.54□□□□□ -0.4
COL8A1-202ENST00000273342 GNASQ5JWF2 1037 aa12.54□□□□□ -0.4
COL8A1-202ENST00000273342 AGAP6Q5VW22 663 aa12.54□□□□□ -0.4
COL8A1-202ENST00000273342 PPP2R2DQ66LE6 453 aa12.54□□□□□ -0.4
COL8A1-202ENST00000273342 LACC1Q8IV20 430 aa12.54□□□□□ -0.4
COL8A1-202ENST00000273342 VANGL1Q8TAA9 524 aaPredicted RBP12.54□□□□□ -0.4
COL8A1-202ENST00000273342 GGHQ92820 318 aa12.54□□□□□ -0.4
COL8A1-202ENST00000273342 AGAP4Q96P64 663 aa12.54□□□□□ -0.4
COL8A1-202ENST00000273342 OR5M11Q96RB7 305 aa12.54□□□□□ -0.4
COL8A1-202ENST00000273342 FEVQ99581 238 aa12.54□□□□□ -0.4
COL8A1-202ENST00000273342 MMP28Q9H239 520 aa12.54□□□□□ -0.4
COL8A1-202ENST00000273342 SAMD4AQ9UPU9 718 aaKnown RBP12.54□□□□□ -0.4
COL8A1-202ENST00000273342 TNPO3Q9Y5L0 923 aaKnown RBP12.54□□□□□ -0.4
COL8A1-202ENST00000273342 DNMT3AQ9Y6K1 912 aaPredicted RBP12.54□□□□□ -0.4
COL8A1-202ENST00000273342 MYADML2A6NDP7 307 aa12.54□□□□□ -0.4
COL8A1-202ENST00000273342 FAM220BPB1ANY3 271 aa12.54□□□□□ -0.4
COL8A1-202ENST00000273342 CLIC1O00299 241 aa12.54□□□□□ -0.4
COL8A1-202ENST00000273342 KIAA0513O60268 411 aa12.54□□□□□ -0.4
COL8A1-202ENST00000273342 RPLP0P05388 317 aaKnown RBP12.54□□□□□ -0.4
COL8A1-202ENST00000273342 SLC6A4P31645 630 aa12.54□□□□□ -0.4
COL8A1-202ENST00000273342 GZMMP51124 257 aa12.54□□□□□ -0.4
COL8A1-202ENST00000273342 PCBP2Q15366 365 aaKnown RBP eCLIP12.54□□□□□ -0.4
COL8A1-202ENST00000273342 PROX2Q3B8N5 592 aa12.54□□□□□ -0.4
COL8A1-202ENST00000273342 ARMC12Q5T9G4 340 aa12.54□□□□□ -0.4
COL8A1-202ENST00000273342 ATG9BQ674R7 924 aa12.54□□□□□ -0.4
COL8A1-202ENST00000273342 NEK10Q6ZWH5 1172 aa12.54□□□□□ -0.4
COL8A1-202ENST00000273342 ADAMTSL2Q86TH1 951 aa12.54□□□□□ -0.4
COL8A1-202ENST00000273342 ZNF280BQ86YH2 543 aa12.54□□□□□ -0.4
COL8A1-202ENST00000273342 ELMOD1Q8N336 334 aa12.54□□□□□ -0.4
COL8A1-202ENST00000273342 APIPQ96GX9 242 aa12.54□□□□□ -0.4
COL8A1-202ENST00000273342 CLPBQ9H078 707 aa12.54□□□□□ -0.4
COL8A1-202ENST00000273342 TM9SF3Q9HD45 589 aa12.54□□□□□ -0.4
COL8A1-202ENST00000273342 CCNB1IP1Q9NPC3 277 aa12.54□□□□□ -0.4
COL8A1-202ENST00000273342 TIGARQ9NQ88 270 aa12.54□□□□□ -0.4
COL8A1-202ENST00000273342 WBP11Q9Y2W2 641 aaKnown RBP12.54□□□□□ -0.4
COL8A1-202ENST00000273342 SAGE2PA6NJ88 616 aa12.54□□□□□ -0.4
COL8A1-202ENST00000273342 PTTG1O95997 202 aa12.54□□□□□ -0.4
COL8A1-202ENST00000273342 EPOP01588 193 aa12.54□□□□□ -0.4
COL8A1-202ENST00000273342 TACR2P21452 398 aa12.54□□□□□ -0.4
COL8A1-202ENST00000273342 POU1F1P28069 291 aa12.54□□□□□ -0.4
COL8A1-202ENST00000273342 GKP32189 559 aa12.54□□□□□ -0.4
COL8A1-202ENST00000273342 RPL9P32969 192 aaKnown RBP12.54□□□□□ -0.4
COL8A1-202ENST00000273342 DEFA1P59665 94 aa12.54□□□□□ -0.4
COL8A1-202ENST00000273342 DEFA3P59666 94 aa12.54□□□□□ -0.4
COL8A1-202ENST00000273342 MRPS6P82932 125 aaKnown RBP12.54□□□□□ -0.4
COL8A1-202ENST00000273342 MXD1Q05195 221 aa12.54□□□□□ -0.4
COL8A1-202ENST00000273342 ST3GAL4Q11206 333 aa12.54□□□□□ -0.4
COL8A1-202ENST00000273342 IRF3Q14653 427 aa12.54□□□□□ -0.4
COL8A1-202ENST00000273342 ATXN7L2Q5T6C5 722 aaPredicted RBP12.54□□□□□ -0.4
COL8A1-202ENST00000273342 LRRC66Q68CR7 880 aa12.54□□□□□ -0.4
COL8A1-202ENST00000273342 PNCKQ6P2M8 343 aa12.54□□□□□ -0.4
COL8A1-202ENST00000273342 DEPDC4Q8N2C3 294 aa12.54□□□□□ -0.4
COL8A1-202ENST00000273342 EID2BQ96D98 161 aa12.54□□□□□ -0.4
COL8A1-202ENST00000273342 PDLIM5Q96HC4 596 aaKnown RBP12.54□□□□□ -0.4
COL8A1-202ENST00000273342 TRNT1Q96Q11 434 aaKnown RBP12.54□□□□□ -0.4
COL8A1-202ENST00000273342 TM6SF2Q9BZW4 377 aa12.54□□□□□ -0.4
COL8A1-202ENST00000273342 MAGIXQ9H6Y5 334 aa12.54□□□□□ -0.4
COL8A1-202ENST00000273342 BTBD3Q9Y2F9 522 aa12.54□□□□□ -0.4
COL8A1-202ENST00000273342 TRBV5-3A0A0A0MS03 114 aa12.53□□□□□ -0.4
COL8A1-202ENST00000273342 GRXCR2A6NFK2 248 aa12.53□□□□□ -0.4
COL8A1-202ENST00000273342 F5H5T6 163 aa12.53□□□□□ -0.4
COL8A1-202ENST00000273342 FPGTO14772 594 aa12.53□□□□□ -0.4
COL8A1-202ENST00000273342 CCNDBP1O95273 360 aa12.53□□□□□ -0.4
COL8A1-202ENST00000273342 IRF1P10914 325 aa12.53□□□□□ -0.4
COL8A1-202ENST00000273342 ACPPP15309 386 aa12.53□□□□□ -0.4
COL8A1-202ENST00000273342 EPB42P16452 691 aa12.53□□□□□ -0.4
COL8A1-202ENST00000273342 KDELR2P33947 212 aa12.53□□□□□ -0.4
COL8A1-202ENST00000273342 SLC15A1P46059 708 aa12.53□□□□□ -0.4
COL8A1-202ENST00000273342 CAMK2BQ13554 666 aa12.53□□□□□ -0.4
COL8A1-202ENST00000273342 LRRC26Q2I0M4 334 aa12.53□□□□□ -0.4
COL8A1-202ENST00000273342 SERPINA9Q86WD7 417 aa12.53□□□□□ -0.4
COL8A1-202ENST00000273342 CALHM3Q86XJ0 350 aa12.53□□□□□ -0.4
COL8A1-202ENST00000273342 GALNT12Q8IXK2 581 aa12.53□□□□□ -0.4
COL8A1-202ENST00000273342 ADGRG2Q8IZP9 1017 aa12.53□□□□□ -0.4
COL8A1-202ENST00000273342 SIX5Q8N196 739 aa12.53□□□□□ -0.4
COL8A1-202ENST00000273342 ASCC1Q8N9N2 400 aaKnown RBP12.53□□□□□ -0.4
COL8A1-202ENST00000273342 OR6F1Q8NGZ6 308 aa12.53□□□□□ -0.4
COL8A1-202ENST00000273342 TP53INP1Q96A56 240 aa12.53□□□□□ -0.4
COL8A1-202ENST00000273342 CITED4Q96RK1 184 aa12.53□□□□□ -0.4
COL8A1-202ENST00000273342 ADAM2Q99965 735 aa12.53□□□□□ -0.4
COL8A1-202ENST00000273342 ELOVL6Q9H5J4 265 aa12.53□□□□□ -0.4
COL8A1-202ENST00000273342 MOV10Q9HCE1 1003 aaKnown RBP12.53□□□□□ -0.4
COL8A1-202ENST00000273342 DHRS7Q9Y394 339 aa12.53□□□□□ -0.4
COL8A1-202ENST00000273342 CENPXA8MT69 81 aa12.53□□□□□ -0.4
COL8A1-202ENST00000273342 ERN1O75460 977 aaKnown RBP12.53□□□□□ -0.4
COL8A1-202ENST00000273342 CSF2P04141 144 aa12.53□□□□□ -0.4
COL8A1-202ENST00000273342 FHP07954 510 aa12.53□□□□□ -0.4
COL8A1-202ENST00000273342 PAX3P23760 479 aa12.53□□□□□ -0.4
COL8A1-202ENST00000273342 OR1G1P47890 313 aa12.53□□□□□ -0.4
COL8A1-202ENST00000273342 SGSHP51688 502 aa12.53□□□□□ -0.4
COL8A1-202ENST00000273342 ELP6Q0PNE2 266 aa12.53□□□□□ -0.4
COL8A1-202ENST00000273342 TSTQ16762 297 aaKnown RBP12.53□□□□□ -0.4
COL8A1-202ENST00000273342 CCDC58Q4VC31 144 aa12.53□□□□□ -0.4
COL8A1-202ENST00000273342 PLEKHH3Q7Z736 793 aa12.53□□□□□ -0.4
COL8A1-202ENST00000273342 TRIM48Q8IWZ4 208 aa12.53□□□□□ -0.4
COL8A1-202ENST00000273342 GTPBP3Q969Y2 492 aaKnown RBP12.53□□□□□ -0.4
COL8A1-202ENST00000273342 DHRS1Q96LJ7 313 aa12.53□□□□□ -0.4
COL8A1-202ENST00000273342 FYTTD1Q96QD9 318 aaKnown RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms