RNA–Protein interactions for RNA: ENST00000272091.7

SDE2-201, Transcript of SDE2 telomere maintenance homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDE2, Length 3,975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDE2-201ENST00000272091 PYDC1Q8WXC3 89 aa11.69□□□□□ -0.54
SDE2-201ENST00000272091 TSACCQ96A04 125 aaPredicted RBP11.69□□□□□ -0.54
SDE2-201ENST00000272091 EGLN2Q96KS0 407 aa11.69□□□□□ -0.54
SDE2-201ENST00000272091 SERPINI1Q99574 410 aa11.69□□□□□ -0.54
SDE2-201ENST00000272091 EHD1Q9H4M9 534 aa11.69□□□□□ -0.54
SDE2-201ENST00000272091 CARS2Q9HA77 564 aaKnown RBP11.69□□□□□ -0.54
SDE2-201ENST00000272091 STX18Q9P2W9 335 aaKnown RBP11.69□□□□□ -0.54
SDE2-201ENST00000272091 LRRC72A6NJI9 287 aa11.69□□□□□ -0.54
SDE2-201ENST00000272091 LMNAP02545 664 aaKnown RBP11.69□□□□□ -0.54
SDE2-201ENST00000272091 CDH1P12830 882 aa11.69□□□□□ -0.54
SDE2-201ENST00000272091 DGKEP52429 567 aa11.69□□□□□ -0.54
SDE2-201ENST00000272091 ZNF33BQ06732 778 aa11.69□□□□□ -0.54
SDE2-201ENST00000272091 DDX39BQ13838 428 aaKnown RBP11.69□□□□□ -0.54
SDE2-201ENST00000272091 ANO7Q6IWH7 933 aa11.69□□□□□ -0.54
SDE2-201ENST00000272091 ENPP7Q6UWV6 458 aa11.69□□□□□ -0.54
SDE2-201ENST00000272091 FAM129CQ86XR2 697 aa11.69□□□□□ -0.54
SDE2-201ENST00000272091 RIMKLAQ8IXN7 391 aa11.69□□□□□ -0.54
SDE2-201ENST00000272091 SLC22A18ASQ8N1D0 253 aa11.69□□□□□ -0.54
SDE2-201ENST00000272091 DPP10Q8N608 796 aa11.69□□□□□ -0.54
SDE2-201ENST00000272091 PCYOX1LQ8NBM8 494 aa11.69□□□□□ -0.54
SDE2-201ENST00000272091 TMEM125Q96AQ2 219 aa11.69□□□□□ -0.54
SDE2-201ENST00000272091 TMEM74Q96NL1 305 aa11.69□□□□□ -0.54
SDE2-201ENST00000272091 OR2M4Q96R27 311 aa11.69□□□□□ -0.54
SDE2-201ENST00000272091 ORAI3Q9BRQ5 295 aa11.69□□□□□ -0.54
SDE2-201ENST00000272091 PCDHAC1Q9H158 963 aa11.69□□□□□ -0.54
SDE2-201ENST00000272091 S100A14Q9HCY8 104 aa11.69□□□□□ -0.54
SDE2-201ENST00000272091 PIPSLA2A3N6 862 aa11.69□□□□□ -0.54
SDE2-201ENST00000272091 B3GALT4O96024 378 aa11.69□□□□□ -0.54
SDE2-201ENST00000272091 ARHGAP19Q14CB8 494 aa11.69□□□□□ -0.54
SDE2-201ENST00000272091 HIPK4Q8NE63 616 aa11.69□□□□□ -0.54
SDE2-201ENST00000272091 SETD7Q8WTS6 366 aaKnown RBP11.69□□□□□ -0.54
SDE2-201ENST00000272091 TOE1Q96GM8 510 aaKnown RBP11.69□□□□□ -0.54
SDE2-201ENST00000272091 APOLD1Q96LR9 279 aa11.69□□□□□ -0.54
SDE2-201ENST00000272091 CAMK1GQ96NX5 476 aa11.69□□□□□ -0.54
SDE2-201ENST00000272091 FERD3LQ96RJ6 166 aa11.69□□□□□ -0.54
SDE2-201ENST00000272091 EBPLQ9BY08 206 aa11.69□□□□□ -0.54
SDE2-201ENST00000272091 CUEDC1Q9NWM3 386 aaPredicted RBP11.69□□□□□ -0.54
SDE2-201ENST00000272091 LEF1Q9UJU2 399 aaPredicted RBP11.69□□□□□ -0.54
SDE2-201ENST00000272091 DYRK1BQ9Y463 629 aa11.69□□□□□ -0.54
SDE2-201ENST00000272091 BCAS2O75934 225 aaPredicted RBP11.69□□□□□ -0.54
SDE2-201ENST00000272091 TBX6O95947 436 aaPredicted RBP11.69□□□□□ -0.54
SDE2-201ENST00000272091 ACPPP15309 386 aa11.69□□□□□ -0.54
SDE2-201ENST00000272091 AK4P27144 223 aaPredicted RBP11.69□□□□□ -0.54
SDE2-201ENST00000272091 TCEA2Q15560 299 aa11.69□□□□□ -0.54
SDE2-201ENST00000272091 SPANXN4Q5MJ08 99 aa11.69□□□□□ -0.54
SDE2-201ENST00000272091 WDR92Q96MX6 357 aa11.69□□□□□ -0.54
SDE2-201ENST00000272091 FOXQ1Q9C009 403 aa11.69□□□□□ -0.54
SDE2-201ENST00000272091 BRF2Q9HAW0 419 aa11.69□□□□□ -0.54
SDE2-201ENST00000272091 POLMQ9NP87 494 aaPredicted RBP11.69□□□□□ -0.54
SDE2-201ENST00000272091 SPATA7Q9P0W8 599 aa11.69□□□□□ -0.54
SDE2-201ENST00000272091 SUCOQ9UBS9 1254 aaKnown RBP11.69□□□□□ -0.54
SDE2-201ENST00000272091 TBC1D29Q9UFV1 150 aa11.69□□□□□ -0.54
SDE2-201ENST00000272091 PCDHGA11Q9Y5H2 935 aa11.69□□□□□ -0.54
SDE2-201ENST00000272091 SH3BGRLO75368 114 aa11.68□□□□□ -0.54
SDE2-201ENST00000272091 KLHL18O94889 574 aa11.68□□□□□ -0.54
SDE2-201ENST00000272091 APBB3O95704 486 aa11.68□□□□□ -0.54
SDE2-201ENST00000272091 PCNAP12004 261 aa11.68□□□□□ -0.54
SDE2-201ENST00000272091 ATXN3P54252 364 aaPredicted RBP11.68□□□□□ -0.54
SDE2-201ENST00000272091 RPS13P62277 151 aaKnown RBP11.68□□□□□ -0.54
SDE2-201ENST00000272091 NFYCQ13952 458 aa11.68□□□□□ -0.54
SDE2-201ENST00000272091 RPE65Q16518 533 aa11.68□□□□□ -0.54
SDE2-201ENST00000272091 UAP1L1Q3KQV9 507 aa11.68□□□□□ -0.54
SDE2-201ENST00000272091 RABL3Q5HYI8 236 aa11.68□□□□□ -0.54
SDE2-201ENST00000272091 C6orf163Q5TEZ5 329 aa11.68□□□□□ -0.54
SDE2-201ENST00000272091 CACHD1Q5VU97 1274 aa11.68□□□□□ -0.54
SDE2-201ENST00000272091 NOXRED1Q6NXP6 359 aa11.68□□□□□ -0.54
SDE2-201ENST00000272091 MED27Q6P2C8 311 aa11.68□□□□□ -0.54
SDE2-201ENST00000272091 FAM160A2Q8N612 972 aaPredicted RBP11.68□□□□□ -0.54
SDE2-201ENST00000272091 XKR8Q9H6D3 395 aa11.68□□□□□ -0.54
SDE2-201ENST00000272091 VPS29Q9UBQ0 182 aa11.68□□□□□ -0.54
SDE2-201ENST00000272091 TAC3Q9UHF0 121 aa11.68□□□□□ -0.54
SDE2-201ENST00000272091 ICKQ9UPZ9 632 aa11.68□□□□□ -0.54
SDE2-201ENST00000272091 PI15O43692 258 aa11.68□□□□□ -0.54
SDE2-201ENST00000272091 KCNJ13O60928 360 aa11.68□□□□□ -0.54
SDE2-201ENST00000272091 ANPEPP15144 967 aa11.68□□□□□ -0.54
SDE2-201ENST00000272091 CLDN8P56748 225 aa11.68□□□□□ -0.54
SDE2-201ENST00000272091 FOXM1Q08050 763 aa11.68□□□□□ -0.54
SDE2-201ENST00000272091 SFSWAPQ12872 951 aaKnown RBP11.68□□□□□ -0.54
SDE2-201ENST00000272091 ALG11Q2TAA5 492 aa11.68□□□□□ -0.54
SDE2-201ENST00000272091 FAM174BQ3ZCQ3 159 aa11.68□□□□□ -0.54
SDE2-201ENST00000272091 NRROSQ86YC3 692 aa11.68□□□□□ -0.54
SDE2-201ENST00000272091 HOMEZQ8IX15 550 aa11.68□□□□□ -0.54
SDE2-201ENST00000272091 ASB9Q96DX5 294 aa11.68□□□□□ -0.54
SDE2-201ENST00000272091 HOPXQ9BPY8 73 aaPredicted RBP11.68□□□□□ -0.54
SDE2-201ENST00000272091 ACAT2Q9BWD1 397 aa11.68□□□□□ -0.54
SDE2-201ENST00000272091 DPY30Q9C005 99 aa11.68□□□□□ -0.54
SDE2-201ENST00000272091 LTB4R2Q9NPC1 389 aa11.68□□□□□ -0.54
SDE2-201ENST00000272091 IMP3Q9NV31 184 aaKnown RBP11.68□□□□□ -0.54
SDE2-201ENST00000272091 WSB2Q9NYS7 404 aaPredicted RBP11.68□□□□□ -0.54
SDE2-201ENST00000272091 TMED5Q9Y3A6 229 aa11.68□□□□□ -0.54
SDE2-201ENST00000272091 DNAJA2O60884 412 aa11.68□□□□□ -0.54
SDE2-201ENST00000272091 PKLRP30613 574 aa11.68□□□□□ -0.54
SDE2-201ENST00000272091 PTDSS1P48651 473 aaKnown RBP11.68□□□□□ -0.54
SDE2-201ENST00000272091 CTBSQ01459 385 aa11.68□□□□□ -0.54
SDE2-201ENST00000272091 SELPLGQ14242 412 aa11.68□□□□□ -0.54
SDE2-201ENST00000272091 SWT1Q5T5J6 900 aaKnown RBP11.68□□□□□ -0.54
SDE2-201ENST00000272091 KIAA0895LQ68EN5 471 aa11.68□□□□□ -0.54
SDE2-201ENST00000272091 ABI3BPQ7Z7G0 1075 aa11.68□□□□□ -0.54
SDE2-201ENST00000272091 MSRB3Q8IXL7 192 aa11.68□□□□□ -0.54
SDE2-201ENST00000272091 PGBD3Q8N328 593 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms