RNA–Protein interactions for RNA: ENST00000269228.9

NPC1-201, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1, Length 5,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-201ENST00000269228 ERVFC1P60507 584 aa13.34□□□□□ -0.27
NPC1-201ENST00000269228 DSC1Q08554 894 aa13.34□□□□□ -0.27
NPC1-201ENST00000269228 DLG1Q12959 904 aa13.34□□□□□ -0.27
NPC1-201ENST00000269228 MED22Q15528 200 aa13.34□□□□□ -0.27
NPC1-201ENST00000269228 ARMC4Q5T2S8 1044 aa13.34□□□□□ -0.27
NPC1-201ENST00000269228 CRTC1Q6UUV9 634 aa13.34□□□□□ -0.27
NPC1-201ENST00000269228 PAQR9Q6ZVX9 377 aa13.34□□□□□ -0.27
NPC1-201ENST00000269228 CEP97Q8IW35 865 aa13.34□□□□□ -0.27
NPC1-201ENST00000269228 FAM81AQ8TBF8 368 aa13.34□□□□□ -0.27
NPC1-201ENST00000269228 SCRN2Q96FV2 425 aa13.34□□□□□ -0.27
NPC1-201ENST00000269228 SLC39A3Q9BRY0 314 aa13.34□□□□□ -0.27
NPC1-201ENST00000269228 TRIM39Q9HCM9 518 aa13.34□□□□□ -0.27
NPC1-201ENST00000269228 BHMG1C9JSJ3 638 aaPredicted RBP13.33□□□□□ -0.27
NPC1-201ENST00000269228 MCEMP1Q8IX19 187 aa13.33□□□□□ -0.27
NPC1-201ENST00000269228 OR10H5Q8NGA6 315 aa13.33□□□□□ -0.27
NPC1-201ENST00000269228 ZNF334Q9HCZ1 680 aaPredicted RBP13.33□□□□□ -0.27
NPC1-201ENST00000269228 ZIM2Q9NZV7 527 aa13.33□□□□□ -0.27
NPC1-201ENST00000269228 LRP5O75197 1615 aa13.33□□□□□ -0.28
NPC1-201ENST00000269228 DUXAA6NLW8 204 aa13.33□□□□□ -0.28
NPC1-201ENST00000269228 VEGFDO43915 354 aa13.33□□□□□ -0.28
NPC1-201ENST00000269228 ZBTB11O95625 1053 aaPredicted RBP13.33□□□□□ -0.28
NPC1-201ENST00000269228 PRSS56P0CW18 603 aa13.33□□□□□ -0.28
NPC1-201ENST00000269228 NR2F6P10588 404 aa13.33□□□□□ -0.28
NPC1-201ENST00000269228 MTHFD1P11586 935 aaKnown RBP13.33□□□□□ -0.28
NPC1-201ENST00000269228 ENGP17813 658 aa13.33□□□□□ -0.28
NPC1-201ENST00000269228 ARHGAP40Q5TG30 622 aa13.33□□□□□ -0.28
NPC1-201ENST00000269228 TRIQKQ629K1 86 aa13.33□□□□□ -0.28
NPC1-201ENST00000269228 GTPBP3Q969Y2 492 aaKnown RBP13.33□□□□□ -0.28
NPC1-201ENST00000269228 DGAT2Q96PD7 388 aa13.33□□□□□ -0.28
NPC1-201ENST00000269228 IL21RQ9HBE5 538 aa13.33□□□□□ -0.28
NPC1-201ENST00000269228 HCN3Q9P1Z3 774 aa13.33□□□□□ -0.28
NPC1-201ENST00000269228 IFT80Q9P2H3 777 aaPredicted RBP13.33□□□□□ -0.28
NPC1-201ENST00000269228 FZD4Q9ULV1 537 aa13.33□□□□□ -0.28
NPC1-201ENST00000269228 USP3Q9Y6I4 520 aa13.33□□□□□ -0.28
NPC1-201ENST00000269228 UGT2B11O75310 529 aa13.33□□□□□ -0.28
NPC1-201ENST00000269228 C8orf89P0DMQ9 161 aa13.33□□□□□ -0.28
NPC1-201ENST00000269228 CDK9P50750 372 aaKnown RBP13.33□□□□□ -0.28
NPC1-201ENST00000269228 MYBPC1Q00872 1141 aa13.33□□□□□ -0.28
NPC1-201ENST00000269228 RAB41Q5JT25 222 aa13.33□□□□□ -0.28
NPC1-201ENST00000269228 SLC2A7Q6PXP3 512 aa13.33□□□□□ -0.28
NPC1-201ENST00000269228 RANBP10Q6VN20 620 aa13.33□□□□□ -0.28
NPC1-201ENST00000269228 SHKBP1Q8TBC3 707 aa13.33□□□□□ -0.28
NPC1-201ENST00000269228 LRRC58Q96CX6 371 aa13.33□□□□□ -0.28
NPC1-201ENST00000269228 CENPNQ96H22 339 aaPredicted RBP13.33□□□□□ -0.28
NPC1-201ENST00000269228 CGREF1Q99674 301 aa13.33□□□□□ -0.28
NPC1-201ENST00000269228 ALKBH4Q9NXW9 302 aa13.33□□□□□ -0.28
NPC1-201ENST00000269228 OR1A2Q9Y585 309 aa13.33□□□□□ -0.28
NPC1-201ENST00000269228 MYH15Q9Y2K3 1946 aa13.33□□□□□ -0.28
NPC1-201ENST00000269228 A0A0U1RQS6 177 aa13.33□□□□□ -0.28
NPC1-201ENST00000269228 XKRYO14609 159 aa13.33□□□□□ -0.28
NPC1-201ENST00000269228 ABLIM1O14639 778 aa13.33□□□□□ -0.28
NPC1-201ENST00000269228 ALPPP05187 535 aa13.33□□□□□ -0.28
NPC1-201ENST00000269228 ALOX5P09917 674 aa13.33□□□□□ -0.28
NPC1-201ENST00000269228 CCKBRP32239 447 aa13.33□□□□□ -0.28
NPC1-201ENST00000269228 CDKN2DP55273 166 aa13.33□□□□□ -0.28
NPC1-201ENST00000269228 BNC1Q01954 994 aa13.33□□□□□ -0.28
NPC1-201ENST00000269228 SCARB2Q14108 478 aa13.33□□□□□ -0.28
NPC1-201ENST00000269228 SPANXN2Q5MJ10 180 aa13.33□□□□□ -0.28
NPC1-201ENST00000269228 TMEM214Q6NUQ4 689 aaKnown RBP13.33□□□□□ -0.28
NPC1-201ENST00000269228 EPGNQ6UW88 154 aa13.33□□□□□ -0.28
NPC1-201ENST00000269228 TSACCQ96A04 125 aaPredicted RBP13.33□□□□□ -0.28
NPC1-201ENST00000269228 COL21A1Q96P44 957 aa13.33□□□□□ -0.28
NPC1-201ENST00000269228 IL17FQ96PD4 163 aa13.33□□□□□ -0.28
NPC1-201ENST00000269228 SLC17A9Q9BYT1 436 aa13.33□□□□□ -0.28
NPC1-201ENST00000269228 PAIP1Q9H074 479 aaKnown RBP13.33□□□□□ -0.28
NPC1-201ENST00000269228 EPB41L1Q9H4G0 881 aa13.33□□□□□ -0.28
NPC1-201ENST00000269228 SPATA7Q9P0W8 599 aa13.33□□□□□ -0.28
NPC1-201ENST00000269228 ABI3Q9P2A4 366 aa13.33□□□□□ -0.28
NPC1-201ENST00000269228 GNB5O14775 395 aa13.32□□□□□ -0.28
NPC1-201ENST00000269228 NME6O75414 186 aaPredicted RBP13.32□□□□□ -0.28
NPC1-201ENST00000269228 JUNDP17535 347 aa13.32□□□□□ -0.28
NPC1-201ENST00000269228 KCNC3Q14003 757 aa13.32□□□□□ -0.28
NPC1-201ENST00000269228 KHDC1Q4VXA5 237 aaKnown RBP13.32□□□□□ -0.28
NPC1-201ENST00000269228 FAM91A1Q658Y4 838 aa13.32□□□□□ -0.28
NPC1-201ENST00000269228 ADGRG6Q86SQ4 1221 aa13.32□□□□□ -0.28
NPC1-201ENST00000269228 JAZF1Q86VZ6 243 aa13.32□□□□□ -0.28
NPC1-201ENST00000269228 SLC34A3Q8N130 599 aa13.32□□□□□ -0.28
NPC1-201ENST00000269228 OR7A2PQ8NGA2 310 aa13.32□□□□□ -0.28
NPC1-201ENST00000269228 PIGXQ8TBF5 258 aa13.32□□□□□ -0.28
NPC1-201ENST00000269228 GIPC3Q8TF64 312 aa13.32□□□□□ -0.28
NPC1-201ENST00000269228 NSUN5Q96P11 429 aaKnown RBP13.32□□□□□ -0.28
NPC1-201ENST00000269228 C17orf62Q9BQA9 187 aa13.32□□□□□ -0.28
NPC1-201ENST00000269228 FBRSL1Q9HCM7 1045 aaKnown RBP13.32□□□□□ -0.28
NPC1-201ENST00000269228 NECTIN3Q9NQS3 549 aa13.32□□□□□ -0.28
NPC1-201ENST00000269228 TMED5Q9Y3A6 229 aa13.32□□□□□ -0.28
NPC1-201ENST00000269228 SLC35E2BP0CK96 405 aa13.32□□□□□ -0.28
NPC1-201ENST00000269228 THRBP10828 461 aa13.32□□□□□ -0.28
NPC1-201ENST00000269228 GPR68Q15743 365 aa13.32□□□□□ -0.28
NPC1-201ENST00000269228 MAPK11Q15759 364 aa13.32□□□□□ -0.28
NPC1-201ENST00000269228 KIAA0319Q5VV43 1072 aa13.32□□□□□ -0.28
NPC1-201ENST00000269228 ZNF57Q68EA5 555 aaPredicted RBP13.32□□□□□ -0.28
NPC1-201ENST00000269228 HTR3DQ70Z44 454 aa13.32□□□□□ -0.28
NPC1-201ENST00000269228 TICAM1Q8IUC6 712 aa13.32□□□□□ -0.28
NPC1-201ENST00000269228 GJD3Q8N144 294 aa13.32□□□□□ -0.28
NPC1-201ENST00000269228 TRMT2BQ96GJ1 504 aaKnown RBP13.32□□□□□ -0.28
NPC1-201ENST00000269228 MGME1Q9BQP7 344 aa13.32□□□□□ -0.28
NPC1-201ENST00000269228 CHID1Q9BWS9 393 aa13.32□□□□□ -0.28
NPC1-201ENST00000269228 TAPBPLQ9BX59 468 aa13.32□□□□□ -0.28
NPC1-201ENST00000269228 REXO4Q9GZR2 422 aaKnown RBP13.32□□□□□ -0.28
NPC1-201ENST00000269228 CLK4Q9HAZ1 481 aaKnown RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms