RNA–Protein interactions for RNA: ENST00000266589.10

SCAF11-201, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 5

Gene SCAF11, Length 2,084 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-201ENST00000266589 REPS1Q96D71 796 aa11.16□□□□□ -0.62
SCAF11-201ENST00000266589 TOE1Q96GM8 510 aaKnown RBP11.16□□□□□ -0.62
SCAF11-201ENST00000266589 HHIPQ96QV1 700 aa11.16□□□□□ -0.62
SCAF11-201ENST00000266589 HAUS8Q9BT25 410 aa11.16□□□□□ -0.62
SCAF11-201ENST00000266589 ACAT2Q9BWD1 397 aa11.16□□□□□ -0.62
SCAF11-201ENST00000266589 EHD1Q9H4M9 534 aa11.16□□□□□ -0.62
SCAF11-201ENST00000266589 BRF2Q9HAW0 419 aa11.16□□□□□ -0.62
SCAF11-201ENST00000266589 PRDM8Q9NQV8 689 aa11.16□□□□□ -0.62
SCAF11-201ENST00000266589 TAC3Q9UHF0 121 aa11.16□□□□□ -0.62
SCAF11-201ENST00000266589 PIPSLA2A3N6 862 aa11.16□□□□□ -0.62
SCAF11-201ENST00000266589 PRORSD1PA6NEY8 169 aa11.16□□□□□ -0.62
SCAF11-201ENST00000266589 OR52A4PA6NMU1 304 aa11.16□□□□□ -0.62
SCAF11-201ENST00000266589 FKBP6O75344 327 aa11.16□□□□□ -0.62
SCAF11-201ENST00000266589 APBB3O95704 486 aa11.16□□□□□ -0.62
SCAF11-201ENST00000266589 IGHV4-34P06331 123 aa11.16□□□□□ -0.62
SCAF11-201ENST00000266589 CDH1P12830 882 aa11.16□□□□□ -0.62
SCAF11-201ENST00000266589 SDC1P18827 310 aa11.16□□□□□ -0.62
SCAF11-201ENST00000266589 SESN3P58005 492 aa11.16□□□□□ -0.62
SCAF11-201ENST00000266589 AP2B1P63010 937 aa11.16□□□□□ -0.62
SCAF11-201ENST00000266589 MS4A2Q01362 244 aa11.16□□□□□ -0.62
SCAF11-201ENST00000266589 MLLT1Q03111 559 aaPredicted RBP11.16□□□□□ -0.62
SCAF11-201ENST00000266589 FOXM1Q08050 763 aa11.16□□□□□ -0.62
SCAF11-201ENST00000266589 FLOT2Q14254 428 aa11.16□□□□□ -0.62
SCAF11-201ENST00000266589 TCEA2Q15560 299 aa11.16□□□□□ -0.62
SCAF11-201ENST00000266589 UAP1L1Q3KQV9 507 aa11.16□□□□□ -0.62
SCAF11-201ENST00000266589 SAMD4BQ5PRF9 694 aaKnown RBP11.16□□□□□ -0.62
SCAF11-201ENST00000266589 KIAA0895LQ68EN5 471 aa11.16□□□□□ -0.62
SCAF11-201ENST00000266589 NOXRED1Q6NXP6 359 aa11.16□□□□□ -0.62
SCAF11-201ENST00000266589 RAB42Q8N4Z0 105 aa11.16□□□□□ -0.62
SCAF11-201ENST00000266589 KRTCAP2Q8N6L1 136 aa11.16□□□□□ -0.62
SCAF11-201ENST00000266589 GLB1L3Q8NCI6 653 aaPredicted RBP11.16□□□□□ -0.62
SCAF11-201ENST00000266589 TSTD1Q8NFU3 115 aa11.16□□□□□ -0.62
SCAF11-201ENST00000266589 TSACCQ96A04 125 aaPredicted RBP11.16□□□□□ -0.62
SCAF11-201ENST00000266589 SH3KBP1Q96B97 665 aa11.16□□□□□ -0.62
SCAF11-201ENST00000266589 TSSK3Q96PN8 268 aa11.16□□□□□ -0.62
SCAF11-201ENST00000266589 EBPLQ9BY08 206 aa11.16□□□□□ -0.62
SCAF11-201ENST00000266589 CLMPQ9H6B4 373 aa11.16□□□□□ -0.62
SCAF11-201ENST00000266589 STX18Q9P2W9 335 aaKnown RBP11.16□□□□□ -0.62
SCAF11-201ENST00000266589 SUCOQ9UBS9 1254 aaKnown RBP11.16□□□□□ -0.62
SCAF11-201ENST00000266589 MRPS17Q9Y2R5 130 aaKnown RBP11.16□□□□□ -0.62
SCAF11-201ENST00000266589 LRP4O75096 1905 aa11.16□□□□□ -0.62
SCAF11-201ENST00000266589 PCM1Q15154 2024 aa11.15□□□□□ -0.62
SCAF11-201ENST00000266589 KRBA1A5PL33 1030 aa11.15□□□□□ -0.62
SCAF11-201ENST00000266589 C10orf142B7Z368 130 aa11.15□□□□□ -0.62
SCAF11-201ENST00000266589 MAP3K7O43318 606 aa11.15□□□□□ -0.62
SCAF11-201ENST00000266589 SH3BGRLO75368 114 aa11.15□□□□□ -0.62
SCAF11-201ENST00000266589 ACPPP15309 386 aa11.15□□□□□ -0.62
SCAF11-201ENST00000266589 SLC6A2P23975 617 aa11.15□□□□□ -0.62
SCAF11-201ENST00000266589 TACR1P25103 407 aa11.15□□□□□ -0.62
SCAF11-201ENST00000266589 ATXN3P54252 364 aaPredicted RBP11.15□□□□□ -0.62
SCAF11-201ENST00000266589 YPEL5P62699 121 aa11.15□□□□□ -0.62
SCAF11-201ENST00000266589 LAPTM5Q13571 262 aa11.15□□□□□ -0.62
SCAF11-201ENST00000266589 KRT33BQ14525 404 aa11.15□□□□□ -0.62
SCAF11-201ENST00000266589 HIST2H2ACQ16777 129 aaPredicted RBP11.15□□□□□ -0.62
SCAF11-201ENST00000266589 FAM174BQ3ZCQ3 159 aa11.15□□□□□ -0.62
SCAF11-201ENST00000266589 HIST2H2AA3Q6FI13 130 aa11.15□□□□□ -0.62
SCAF11-201ENST00000266589 DHDDSQ86SQ9 333 aa11.15□□□□□ -0.62
SCAF11-201ENST00000266589 C17orf64Q86WR6 236 aa11.15□□□□□ -0.62
SCAF11-201ENST00000266589 LAS2Q8IYD9 372 aa11.15□□□□□ -0.62
SCAF11-201ENST00000266589 TMEM145Q8NBT3 493 aa11.15□□□□□ -0.62
SCAF11-201ENST00000266589 PYDC1Q8WXC3 89 aa11.15□□□□□ -0.62
SCAF11-201ENST00000266589 SMPDL3AQ92484 453 aa11.15□□□□□ -0.62
SCAF11-201ENST00000266589 ASB9Q96DX5 294 aa11.15□□□□□ -0.62
SCAF11-201ENST00000266589 FCRL1Q96LA6 429 aa11.15□□□□□ -0.62
SCAF11-201ENST00000266589 CAMK1GQ96NX5 476 aa11.15□□□□□ -0.62
SCAF11-201ENST00000266589 FOXQ1Q9C009 403 aa11.15□□□□□ -0.62
SCAF11-201ENST00000266589 SPNS1Q9H2V7 528 aa11.15□□□□□ -0.62
SCAF11-201ENST00000266589 LTB4R2Q9NPC1 389 aa11.15□□□□□ -0.62
SCAF11-201ENST00000266589 SLAMF8Q9P0V8 285 aa11.15□□□□□ -0.62
SCAF11-201ENST00000266589 ABCD2Q9UBJ2 740 aa11.15□□□□□ -0.62
SCAF11-201ENST00000266589 CD300AQ9UGN4 299 aa11.15□□□□□ -0.62
SCAF11-201ENST00000266589 FBXL21Q9UKT6 434 aa11.15□□□□□ -0.62
SCAF11-201ENST00000266589 NME4O00746 187 aa11.15□□□□□ -0.63
SCAF11-201ENST00000266589 BCAS2O75934 225 aaPredicted RBP11.15□□□□□ -0.63
SCAF11-201ENST00000266589 ETHE1O95571 254 aa11.15□□□□□ -0.63
SCAF11-201ENST00000266589 AK4P27144 223 aaPredicted RBP11.15□□□□□ -0.63
SCAF11-201ENST00000266589 PSMB5P28074 263 aa11.15□□□□□ -0.63
SCAF11-201ENST00000266589 CCR5P51681 352 aa11.15□□□□□ -0.63
SCAF11-201ENST00000266589 CLDN8P56748 225 aa11.15□□□□□ -0.63
SCAF11-201ENST00000266589 RPS13P62277 151 aaKnown RBP11.15□□□□□ -0.63
SCAF11-201ENST00000266589 YBX1P67809 324 aaKnown RBP11.15□□□□□ -0.63
SCAF11-201ENST00000266589 CTBSQ01459 385 aa11.15□□□□□ -0.63
SCAF11-201ENST00000266589 ACSM2AQ08AH3 577 aa11.15□□□□□ -0.63
SCAF11-201ENST00000266589 RPE65Q16518 533 aa11.15□□□□□ -0.63
SCAF11-201ENST00000266589 PUS10Q3MIT2 529 aaKnown RBP11.15□□□□□ -0.63
SCAF11-201ENST00000266589 SPANXN4Q5MJ08 99 aa11.15□□□□□ -0.63
SCAF11-201ENST00000266589 ACSM2BQ68CK6 577 aa11.15□□□□□ -0.63
SCAF11-201ENST00000266589 AAGABQ6PD74 315 aa11.15□□□□□ -0.63
SCAF11-201ENST00000266589 Q6ZSR6 202 aa11.15□□□□□ -0.63
SCAF11-201ENST00000266589 SLC15A3Q8IY34 581 aa11.15□□□□□ -0.63
SCAF11-201ENST00000266589 FAM9CQ8IZT9 166 aa11.15□□□□□ -0.63
SCAF11-201ENST00000266589 DPP10Q8N608 796 aa11.15□□□□□ -0.63
SCAF11-201ENST00000266589 LINC01555Q8NAE3 123 aa11.15□□□□□ -0.63
SCAF11-201ENST00000266589 BHLHE22Q8NFJ8 381 aaPredicted RBP11.15□□□□□ -0.63
SCAF11-201ENST00000266589 DNAJB14Q8TBM8 379 aa11.15□□□□□ -0.63
SCAF11-201ENST00000266589 SLC13A3Q8WWT9 602 aa11.15□□□□□ -0.63
SCAF11-201ENST00000266589 GPR174Q9BXC1 333 aa11.15□□□□□ -0.63
SCAF11-201ENST00000266589 TPSD1Q9BZJ3 242 aa11.15□□□□□ -0.63
SCAF11-201ENST00000266589 TRIM8Q9BZR9 551 aa11.15□□□□□ -0.63
SCAF11-201ENST00000266589 XKR8Q9H6D3 395 aa11.15□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms