RNA–Protein interactions for RNA: ENST00000265036.9

DEPDC1B-201, Transcript of DEP domain containing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1B, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-201ENST00000265036 SNRPNP63162 240 aaKnown RBP6.95□□□□□ -1.3
DEPDC1B-201ENST00000265036 ACY1Q03154 408 aa6.95□□□□□ -1.3
DEPDC1B-201ENST00000265036 CLN3Q13286 438 aa6.95□□□□□ -1.3
DEPDC1B-201ENST00000265036 CATSPEREQ5SY80 951 aa6.95□□□□□ -1.3
DEPDC1B-201ENST00000265036 TMPRSS11BQ86T26 416 aa6.95□□□□□ -1.3
DEPDC1B-201ENST00000265036 GPSM1Q86YR5 675 aa6.95□□□□□ -1.3
DEPDC1B-201ENST00000265036 FBXO15Q8NCQ5 510 aaPredicted RBP6.95□□□□□ -1.3
DEPDC1B-201ENST00000265036 ZNF248Q8NDW4 579 aa6.95□□□□□ -1.3
DEPDC1B-201ENST00000265036 ZNF740Q8NDX6 193 aa6.95□□□□□ -1.3
DEPDC1B-201ENST00000265036 SNIP1Q8TAD8 396 aaKnown RBP6.95□□□□□ -1.3
DEPDC1B-201ENST00000265036 SLC22A18Q96BI1 424 aa6.95□□□□□ -1.3
DEPDC1B-201ENST00000265036 CLIP3Q96DZ5 547 aa6.95□□□□□ -1.3
DEPDC1B-201ENST00000265036 TMEM79Q9BSE2 394 aa6.95□□□□□ -1.3
DEPDC1B-201ENST00000265036 DDA1Q9BW61 102 aa6.95□□□□□ -1.3
DEPDC1B-201ENST00000265036 TRIM54Q9BYV2 358 aa6.95□□□□□ -1.3
DEPDC1B-201ENST00000265036 SLC7A5P2Q9GIP4 190 aa6.95□□□□□ -1.3
DEPDC1B-201ENST00000265036 SPNS1Q9H2V7 528 aa6.95□□□□□ -1.3
DEPDC1B-201ENST00000265036 FANCEQ9HB96 536 aa6.95□□□□□ -1.3
DEPDC1B-201ENST00000265036 FBXO8Q9NRD0 319 aa6.95□□□□□ -1.3
DEPDC1B-201ENST00000265036 SEMA5BQ9P283 1151 aa6.95□□□□□ -1.3
DEPDC1B-201ENST00000265036 PSMC3IPQ9P2W1 217 aaPredicted RBP6.95□□□□□ -1.3
DEPDC1B-201ENST00000265036 XPR1Q9UBH6 696 aa6.95□□□□□ -1.3
DEPDC1B-201ENST00000265036 PILRAQ9UKJ1 303 aa6.95□□□□□ -1.3
DEPDC1B-201ENST00000265036 OARD1Q9Y530 152 aa6.95□□□□□ -1.3
DEPDC1B-201ENST00000265036 PCDHGA7Q9Y5G6 932 aa6.95□□□□□ -1.3
DEPDC1B-201ENST00000265036 MRPS18BQ9Y676 258 aaKnown RBP6.95□□□□□ -1.3
DEPDC1B-201ENST00000265036 FFAR3O14843 346 aa6.95□□□□□ -1.3
DEPDC1B-201ENST00000265036 GPR42O15529 346 aa6.95□□□□□ -1.3
DEPDC1B-201ENST00000265036 MAP3K7O43318 606 aa6.95□□□□□ -1.3
DEPDC1B-201ENST00000265036 ZNF749O43361 778 aa6.95□□□□□ -1.3
DEPDC1B-201ENST00000265036 KRT37O76014 449 aa6.95□□□□□ -1.3
DEPDC1B-201ENST00000265036 WDR47O94967 919 aa6.95□□□□□ -1.3
DEPDC1B-201ENST00000265036 ANXA5P08758 320 aa6.95□□□□□ -1.3
DEPDC1B-201ENST00000265036 WT1P19544 449 aaPredicted RBP6.95□□□□□ -1.3
DEPDC1B-201ENST00000265036 CRABP2P29373 138 aa6.95□□□□□ -1.3
DEPDC1B-201ENST00000265036 AP1S2P56377 157 aa6.95□□□□□ -1.3
DEPDC1B-201ENST00000265036 RPS18P62269 152 aaKnown RBP6.95□□□□□ -1.3
DEPDC1B-201ENST00000265036 CYP4F2P78329 520 aa6.95□□□□□ -1.3
DEPDC1B-201ENST00000265036 NFKB2Q00653 900 aa6.95□□□□□ -1.3
DEPDC1B-201ENST00000265036 GPS2Q13227 327 aa6.95□□□□□ -1.3
DEPDC1B-201ENST00000265036 ARHGAP19Q14CB8 494 aa6.95□□□□□ -1.3
DEPDC1B-201ENST00000265036 TAOK1Q7L7X3 1001 aa6.95□□□□□ -1.3
DEPDC1B-201ENST00000265036 ISCA2Q86U28 154 aa6.95□□□□□ -1.3
DEPDC1B-201ENST00000265036 KMT5CQ86Y97 462 aa6.95□□□□□ -1.3
DEPDC1B-201ENST00000265036 TMEM151BQ8IW70 566 aa6.95□□□□□ -1.3
DEPDC1B-201ENST00000265036 GPR135Q8IZ08 494 aa6.95□□□□□ -1.3
DEPDC1B-201ENST00000265036 CACNA2D3Q8IZS8 1091 aa6.95□□□□□ -1.3
DEPDC1B-201ENST00000265036 CYP4X1Q8N118 509 aa6.95□□□□□ -1.3
DEPDC1B-201ENST00000265036 HMGCLL1Q8TB92 370 aa6.95□□□□□ -1.3
DEPDC1B-201ENST00000265036 NEIL2Q969S2 332 aa6.95□□□□□ -1.3
DEPDC1B-201ENST00000265036 TCTN2Q96GX1 697 aa6.95□□□□□ -1.3
DEPDC1B-201ENST00000265036 PDLIM5Q96HC4 596 aaKnown RBP6.95□□□□□ -1.3
DEPDC1B-201ENST00000265036 SCYL1Q96KG9 808 aa6.95□□□□□ -1.3
DEPDC1B-201ENST00000265036 SELENOSQ9BQE4 189 aa6.95□□□□□ -1.3
DEPDC1B-201ENST00000265036 C12orf65Q9H3J6 166 aaKnown RBP6.95□□□□□ -1.3
DEPDC1B-201ENST00000265036 NDOR1Q9UHB4 597 aa6.95□□□□□ -1.3
DEPDC1B-201ENST00000265036 RALYQ9UKM9 306 aaKnown RBP6.95□□□□□ -1.3
DEPDC1B-201ENST00000265036 A0A1W2PPM1 405 aa6.94□□□□□ -1.3
DEPDC1B-201ENST00000265036 E7EQ34 232 aa6.94□□□□□ -1.3
DEPDC1B-201ENST00000265036 SLC16A5O15375 505 aa6.94□□□□□ -1.3
DEPDC1B-201ENST00000265036 ZSCAN9O15535 394 aaPredicted RBP6.94□□□□□ -1.3
DEPDC1B-201ENST00000265036 P2RX6O15547 441 aa6.94□□□□□ -1.3
DEPDC1B-201ENST00000265036 RAD1O60671 282 aa6.94□□□□□ -1.3
DEPDC1B-201ENST00000265036 SNRPAP09012 282 aaKnown RBP6.94□□□□□ -1.3
DEPDC1B-201ENST00000265036 LIPCP11150 499 aa6.94□□□□□ -1.3
DEPDC1B-201ENST00000265036 GABRA4P48169 554 aa6.94□□□□□ -1.3
DEPDC1B-201ENST00000265036 SERPINB9P50453 376 aa6.94□□□□□ -1.3
DEPDC1B-201ENST00000265036 ITGA1P56199 1179 aa6.94□□□□□ -1.3
DEPDC1B-201ENST00000265036 TLE3Q04726 772 aa6.94□□□□□ -1.3
DEPDC1B-201ENST00000265036 PRDX1Q06830 199 aaKnown RBP6.94□□□□□ -1.3
DEPDC1B-201ENST00000265036 HKDC1Q2TB90 917 aa6.94□□□□□ -1.3
DEPDC1B-201ENST00000265036 ATP1A1-AS1Q5TC04 95 aa6.94□□□□□ -1.3
DEPDC1B-201ENST00000265036 ADNP2Q6IQ32 1131 aa6.94□□□□□ -1.3
DEPDC1B-201ENST00000265036 LCN10Q6JVE6 187 aa6.94□□□□□ -1.3
DEPDC1B-201ENST00000265036 CAPN13Q6MZZ7 669 aaPredicted RBP6.94□□□□□ -1.3
DEPDC1B-201ENST00000265036 WDR93Q6P2C0 686 aa6.94□□□□□ -1.3
DEPDC1B-201ENST00000265036 C16orf46Q6P387 395 aa6.94□□□□□ -1.3
DEPDC1B-201ENST00000265036 ADGRD1Q6QNK2 874 aa6.94□□□□□ -1.3
DEPDC1B-201ENST00000265036 RPS27LQ71UM5 84 aaKnown RBP6.94□□□□□ -1.3
DEPDC1B-201ENST00000265036 C17orf64Q86WR6 236 aa6.94□□□□□ -1.3
DEPDC1B-201ENST00000265036 C4orf33Q8N1A6 199 aa6.94□□□□□ -1.3
DEPDC1B-201ENST00000265036 KDF1Q8NAX2 398 aaPredicted RBP6.94□□□□□ -1.3
DEPDC1B-201ENST00000265036 KIAA1191Q96A73 305 aa6.94□□□□□ -1.3
DEPDC1B-201ENST00000265036 RHBDF1Q96CC6 855 aa6.94□□□□□ -1.3
DEPDC1B-201ENST00000265036 ATOH8Q96SQ7 321 aa6.94□□□□□ -1.3
DEPDC1B-201ENST00000265036 DHRS4Q9BTZ2 278 aa6.94□□□□□ -1.3
DEPDC1B-201ENST00000265036 ACTR5Q9H9F9 607 aaPredicted RBP6.94□□□□□ -1.3
DEPDC1B-201ENST00000265036 EURLQ9NYK6 297 aa6.94□□□□□ -1.3
DEPDC1B-201ENST00000265036 IL17BQ9UHF5 180 aa6.94□□□□□ -1.3
DEPDC1B-201ENST00000265036 PCDHGA3Q9Y5H0 932 aa6.94□□□□□ -1.3
DEPDC1B-201ENST00000265036 COL6A6A6NMZ7 2263 aa6.94□□□□□ -1.3
DEPDC1B-201ENST00000265036 A0A087X1B8 175 aa6.94□□□□□ -1.3
DEPDC1B-201ENST00000265036 LOC101059948A0A1B0GTJ6 334 aa6.94□□□□□ -1.3
DEPDC1B-201ENST00000265036 OR2A25A4D2G3 310 aa6.94□□□□□ -1.3
DEPDC1B-201ENST00000265036 ZNF839A8K0R7 811 aa6.94□□□□□ -1.3
DEPDC1B-201ENST00000265036 TAPBPO15533 448 aa6.94□□□□□ -1.3
DEPDC1B-201ENST00000265036 RRP8O43159 456 aaKnown RBP6.94□□□□□ -1.3
DEPDC1B-201ENST00000265036 CCNT2O60583 730 aaKnown RBP6.94□□□□□ -1.3
DEPDC1B-201ENST00000265036 RFPL1O75677 317 aa6.94□□□□□ -1.3
DEPDC1B-201ENST00000265036 KLHL2O95198 593 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms